Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_B09
         (769 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    25   1.2  
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    24   2.5  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    24   2.5  
AF025467-2|AAN65301.1|  505|Caenorhabditis elegans Hypothetical ...    29   3.6  
AF025467-1|AAB71039.2|  528|Caenorhabditis elegans Hypothetical ...    29   3.6  
AF535160-1|AAN33048.1|  468|Caenorhabditis elegans UNC-34 protein.     24   7.2  
AC025722-5|AAO12397.1|  454|Caenorhabditis elegans Uncoordinated...    24   7.3  
AC025722-6|AAO12398.1|  310|Caenorhabditis elegans Uncoordinated...    24   7.5  
AF106580-3|AAC78205.1|  881|Caenorhabditis elegans Temporarily a...    28   8.4  

>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 25.0 bits (52), Expect(2) = 1.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 629 PXLAXLXXXPPPXXPPPP 682
           P +A     PPP  PPPP
Sbjct: 503 PPIATPSSVPPPPPPPPP 520



 Score = 24.2 bits (50), Expect(2) = 1.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 656 PPPXXPPPPXA 688
           PPP  PPPP A
Sbjct: 514 PPPPPPPPPPA 524


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 24.2 bits (50), Expect(2) = 2.5
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +2

Query: 656 PPPXXPPPPXAXXXP 700
           PPP  PPPP     P
Sbjct: 649 PPPPPPPPPSGAGGP 663



 Score = 23.8 bits (49), Expect(2) = 2.5
 Identities = 21/83 (25%), Positives = 25/83 (30%), Gaps = 3/83 (3%)
 Frame = +2

Query: 443 AXPRPXXSPQSXXXXPXRXXPXPXPGFFXLXXPGHXX-RXPXSXXPXXXXXXXPXPXXXX 619
           A P P    +S    P R  P P         P     + P    P       P P    
Sbjct: 556 AAPPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPP 615

Query: 620 XAXPX-LAXLXXX-PPPXXPPPP 682
                 +A +    PPP  PPPP
Sbjct: 616 PPQSFGMAPISSAAPPPPPPPPP 638


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 24.2 bits (50), Expect(2) = 2.5
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +2

Query: 656 PPPXXPPPPXAXXXP 700
           PPP  PPPP     P
Sbjct: 475 PPPPPPPPPSGAGGP 489



 Score = 23.8 bits (49), Expect(2) = 2.5
 Identities = 21/83 (25%), Positives = 25/83 (30%), Gaps = 3/83 (3%)
 Frame = +2

Query: 443 AXPRPXXSPQSXXXXPXRXXPXPXPGFFXLXXPGHXX-RXPXSXXPXXXXXXXPXPXXXX 619
           A P P    +S    P R  P P         P     + P    P       P P    
Sbjct: 382 AAPPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPP 441

Query: 620 XAXPX-LAXLXXX-PPPXXPPPP 682
                 +A +    PPP  PPPP
Sbjct: 442 PPQSFGMAPISSAAPPPPPPPPP 464


>AF025467-2|AAN65301.1|  505|Caenorhabditis elegans Hypothetical
           protein R148.5b protein.
          Length = 505

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/54 (27%), Positives = 16/54 (29%)
 Frame = +2

Query: 539 PGHXXRXPXSXXPXXXXXXXPXPXXXXXAXPXLAXLXXXPPPXXPPPPXAXXXP 700
           P H    P +  P       P P       P        PPP  PPPP     P
Sbjct: 278 PPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGP 331


>AF025467-1|AAB71039.2|  528|Caenorhabditis elegans Hypothetical
           protein R148.5a protein.
          Length = 528

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/54 (27%), Positives = 16/54 (29%)
 Frame = +2

Query: 539 PGHXXRXPXSXXPXXXXXXXPXPXXXXXAXPXLAXLXXXPPPXXPPPPXAXXXP 700
           P H    P +  P       P P       P        PPP  PPPP     P
Sbjct: 278 PPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGP 331


>AF535160-1|AAN33048.1|  468|Caenorhabditis elegans UNC-34 protein.
          Length = 468

 Score = 24.2 bits (50), Expect(2) = 7.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 656 PPPXXPPPPXA 688
           PPP  PPPP A
Sbjct: 247 PPPPPPPPPPA 257



 Score = 22.2 bits (45), Expect(2) = 7.2
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 629 PXLAXLXXXPPPXXPPPP 682
           P L  +    PP  PPPP
Sbjct: 237 PPLPPVGAGAPPPPPPPP 254


>AC025722-5|AAO12397.1|  454|Caenorhabditis elegans Uncoordinated
           protein 34, isoform a protein.
          Length = 454

 Score = 24.2 bits (50), Expect(2) = 7.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 656 PPPXXPPPPXA 688
           PPP  PPPP A
Sbjct: 233 PPPPPPPPPPA 243



 Score = 22.2 bits (45), Expect(2) = 7.3
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 629 PXLAXLXXXPPPXXPPPP 682
           P L  +    PP  PPPP
Sbjct: 223 PPLPPVGAGAPPPPPPPP 240


>AC025722-6|AAO12398.1|  310|Caenorhabditis elegans Uncoordinated
           protein 34, isoform b protein.
          Length = 310

 Score = 24.2 bits (50), Expect(2) = 7.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 656 PPPXXPPPPXA 688
           PPP  PPPP A
Sbjct: 233 PPPPPPPPPPA 243



 Score = 22.2 bits (45), Expect(2) = 7.5
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 629 PXLAXLXXXPPPXXPPPP 682
           P L  +    PP  PPPP
Sbjct: 223 PPLPPVGAGAPPPPPPPP 240


>AF106580-3|AAC78205.1|  881|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 268 protein.
          Length = 881

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +2

Query: 629 PXLAXLXXXPPPXXPPPPXAXXXP 700
           P ++ L   PPP  PPPP     P
Sbjct: 75  PLISILQQAPPPPPPPPPPTLKAP 98


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,990,469
Number of Sequences: 27780
Number of extensions: 147738
Number of successful extensions: 908
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)