Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_B01
(754 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 95 7e-20
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 74 1e-13
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 38 0.011
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 34 0.14
04_04_1183 - 31537196-31537290,31537665-31537986,31538176-315382... 29 4.0
07_03_0035 - 12677942-12678568 28 6.9
05_02_0105 + 6644264-6644344,6645573-6646097,6646185-6646410,664... 28 6.9
04_01_0097 - 998766-999383,999479-999861,1000021-1000398,1000486... 28 6.9
03_01_0291 - 2250349-2250966,2251062-2251444,2251604-2251981,225... 28 6.9
02_05_0844 - 32144417-32144764,32145588-32145686,32146218-321464... 28 9.2
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 94.7 bits (225), Expect = 7e-20
Identities = 53/137 (38%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Frame = -3
Query: 605 PDDPXG-IHPIGXGKNCE-GV*ELVDMLGYSYVQKRLGFLRXLKQXRVTLXXFXFSWXKV 432
PD+P IH +G E G E + L + + L FL LK +++L F+ KV
Sbjct: 426 PDEPKDYIHRVGRTARGEKGKGEALLFL----LPQELKFLIYLKAAKISLTELVFNENKV 481
Query: 431 XDIQLQLEKLISRNYFLNQSAKEAFKSYLRAYDSHHLKTIFDIDTIDLAKASKSFGFNVP 252
++Q LE ++ NYFLNQSAKEA++SY+ AYDSH +K IFD+ ++L + SF F P
Sbjct: 482 PNLQSHLENIVGENYFLNQSAKEAYRSYILAYDSHSMKDIFDVHNLNLKDVAASFCFKNP 541
Query: 251 PAVELKVANKGPPQKRK 201
P V + + + +RK
Sbjct: 542 PKVNIDLESSASKHRRK 558
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/76 (44%), Positives = 47/76 (61%)
Frame = -3
Query: 428 DIQLQLEKLISRNYFLNQSAKEAFKSYLRAYDSHHLKTIFDIDTIDLAKASKSFGFNVPP 249
D + EK++ NY LN+SAKEA+KSYL AY SH +K IF I +DL + SF F+ PP
Sbjct: 417 DSSFEQEKIVGGNYILNRSAKEAYKSYLLAYKSHSMKDIFAIHQLDLTSVAASFCFSEPP 476
Query: 248 AVELKVANKGPPQKRK 201
V L + + ++K
Sbjct: 477 KVNLDLESSASKHRKK 492
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -3
Query: 413 LEKLISRNYFLNQSAKEAFKSYLRAYDSH--HLKTIFDIDTIDLAKASKSFGFNVPPAV 243
LE ++ + A++AF S++RAY +H LK IF + + L ++SFG P++
Sbjct: 472 LESFVTSEDTTKKLARDAFCSWVRAYTAHRGELKKIFMVKKLHLGHVARSFGLKEQPSL 530
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = -3
Query: 497 FLRXLKQXRVTLXXFXFSWXKVXDIQLQLEKLISRNYFLNQSAKEAFKSYLRAYDSHHLK 318
++ LK+ V L S V DI Q+ + + + AF S++RAY HH
Sbjct: 399 YVEFLKRRGVPLTERECSTNAV-DIVPQIRSAALEDRNVMEKGLTAFVSFVRAYKEHHCS 457
Query: 317 TIFDIDTIDLAKASKSFG-FNVPPAVELK 234
IF +++ + +G +P E+K
Sbjct: 458 YIFSWKDLEIGRLGMEYGLLQIPSMPEVK 486
>04_04_1183 - 31537196-31537290,31537665-31537986,31538176-31538277,
31538826-31539071,31539385-31539506,31539588-31540344,
31540447-31540770,31540872-31541052,31541208-31541602,
31541877-31541942,31542225-31542377,31542593-31542691,
31542776-31542982,31543432-31543572,31543852-31544019,
31544302-31544395,31544479-31544585,31545140-31545274,
31545549-31545656,31545975-31546049,31546197-31546262,
31546500-31546556,31546678-31546702,31546809-31546889,
31546966-31547080,31547211-31547370,31547444-31547483,
31547599-31547780,31547905-31548234
Length = 1650
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -3
Query: 383 LNQSAKEAFKSYLRAYDSHHLKTIFDIDTIDLAKASKSFGFNVP 252
+ ++ +E FKS +H L T+ D D + + A K F+ P
Sbjct: 1442 IQKTIREEFKSCTMLIIAHRLNTVIDCDRLLILSAGKVLEFDSP 1485
>07_03_0035 - 12677942-12678568
Length = 208
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 515 RKNSQACPLVPKPPRSSSQXRWDVFXLDHLGGS 613
R+ + C VP+ PR S + RW + +GG+
Sbjct: 140 RRQPRLCHRVPRRPRPSPRRRWRHWGWSQMGGA 172
>05_02_0105 +
6644264-6644344,6645573-6646097,6646185-6646410,
6646498-6646875,6647035-6647417,6647513-6648130
Length = 736
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 443 WXKVXDIQLQLEKLISRNYFLNQSAKEAFKSYLR 342
W ++ D+ + I FL + +E F+SYLR
Sbjct: 675 WKRIEDLTIPASDKIELAIFLTKPEQECFRSYLR 708
>04_01_0097 - 998766-999383,999479-999861,1000021-1000398,
1000486-1000711,1000799-1001323,1003032-1003164,
1004353-1004435,1004645-1005349,1005483-1005556,
1006290-1006392,1006485-1006727
Length = 1156
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 443 WXKVXDIQLQLEKLISRNYFLNQSAKEAFKSYLR 342
W ++ D+ + I FL + +E F+SYLR
Sbjct: 1095 WKRIEDLTIPASDKIELAIFLTKPEQECFRSYLR 1128
>03_01_0291 -
2250349-2250966,2251062-2251444,2251604-2251981,
2252147-2252294,2252382-2252906,2253990-2254112,
2254151-2254205,2254510-2254640
Length = 786
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 443 WXKVXDIQLQLEKLISRNYFLNQSAKEAFKSYLR 342
W ++ D+ + I FL + +E F+SYLR
Sbjct: 725 WKRIEDLTIPASDKIELAIFLTKPEQECFRSYLR 758
>02_05_0844 -
32144417-32144764,32145588-32145686,32146218-32146410,
32147049-32147107,32147189-32147263,32147557-32147670,
32147776-32147895,32148204-32148216,32148421-32148512,
32149078-32149164,32149254-32149328,32149630-32149680,
32149852-32149947,32150135-32150221,32150312-32150368,
32150475-32150600,32150709-32150949,32151028-32151114,
32151260-32151637,32152847-32153187
Length = 912
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 170 RT*SIHNHHLPFFSVEVLCLRL*VLQRAVH*NQMISMP*LNRL 298
RT ++ ++HLP VEV+C +L LQ A++ N I + RL
Sbjct: 476 RTNALLSNHLPPKIVEVVCCKLTALQTALY-NHFIHSKNVKRL 517
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,317,049
Number of Sequences: 37544
Number of extensions: 323994
Number of successful extensions: 726
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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