Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_B01
         (754 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067608-1|AAC17654.2|  544|Caenorhabditis elegans Hypothetical ...   133   1e-31
AC024753-1|AAF60456.1|  732|Caenorhabditis elegans Hypothetical ...    40   0.003
Z81570-6|CAB04607.2|  725|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AY887911-1|AAX34423.1|  737|Caenorhabditis elegans anion transpo...    29   2.7  
Z66513-5|CAA91334.1|  331|Caenorhabditis elegans Hypothetical pr...    28   6.2  

>AF067608-1|AAC17654.2|  544|Caenorhabditis elegans Hypothetical
           protein B0511.6 protein.
          Length = 544

 Score =  133 bits (322), Expect = 1e-31
 Identities = 62/96 (64%), Positives = 75/96 (78%)
 Frame = -3

Query: 509 KRLGFLRXLKQXRVTLXXFXFSWXKVXDIQLQLEKLISRNYFLNQSAKEAFKSYLRAYDS 330
           + LGFLR LK  +VTL  F FSW KV +IQ QLE LIS+NY+LN+SAKEA+K YLRAYDS
Sbjct: 422 EELGFLRYLKAAKVTLNEFEFSWSKVANIQSQLENLISKNYYLNKSAKEAYKCYLRAYDS 481

Query: 329 HHLKTIFDIDTIDLAKASKSFGFNVPPAVELKVANK 222
           H LK IFD+  +DL   SKSFGF+VPP V+L ++NK
Sbjct: 482 HSLKDIFDVTNMDLTAVSKSFGFSVPPFVDLPISNK 517


>AC024753-1|AAF60456.1|  732|Caenorhabditis elegans Hypothetical
           protein Y23H5B.6 protein.
          Length = 732

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 18/62 (29%), Positives = 37/62 (59%)
 Frame = -3

Query: 428 DIQLQLEKLISRNYFLNQSAKEAFKSYLRAYDSHHLKTIFDIDTIDLAKASKSFGFNVPP 249
           D++++L  +++ +  L + A+++  +YLR+  +   K +FD++ ID A  + SFG    P
Sbjct: 457 DVRVKLRAILAESQELKEYAQKSIVAYLRSIYTMKDKKVFDVEAIDAAALADSFGLVSVP 516

Query: 248 AV 243
            V
Sbjct: 517 RV 518


>Z81570-6|CAB04607.2|  725|Caenorhabditis elegans Hypothetical
           protein K12G11.2 protein.
          Length = 725

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 20/70 (28%), Positives = 32/70 (45%)
 Frame = +3

Query: 123 YFRFFCLPFEIGWSV*GLEVSITTTSLSFLWRSFVCDFKFYSGRYIETK*FRCLS*IDCI 302
           +F  F     +G ++ G+E  + T   +F    FV     Y GR++ET     LS I  I
Sbjct: 398 FFPTFPTSIGLGRTMVGVESGVKTQVATFFSCLFVLSVSLYFGRFLETLPMCVLSAIIVI 457

Query: 303 NVKNRFQVMR 332
            +K+    +R
Sbjct: 458 ALKSMLWKLR 467


>AY887911-1|AAX34423.1|  737|Caenorhabditis elegans anion
           transporter SULP-5 protein.
          Length = 737

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 20/70 (28%), Positives = 32/70 (45%)
 Frame = +3

Query: 123 YFRFFCLPFEIGWSV*GLEVSITTTSLSFLWRSFVCDFKFYSGRYIETK*FRCLS*IDCI 302
           +F  F     +G ++ G+E  + T   +F    FV     Y GR++ET     LS I  I
Sbjct: 410 FFPTFPTSIGLGRTMVGVESGVKTQVATFFSCLFVLSVSLYFGRFLETLPMCVLSAIIVI 469

Query: 303 NVKNRFQVMR 332
            +K+    +R
Sbjct: 470 ALKSMLWKLR 479


>Z66513-5|CAA91334.1|  331|Caenorhabditis elegans Hypothetical
           protein F54D5.8 protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = -3

Query: 236 KVANKGPPQKRKXXXXXXYFKSLNAPSDFKRKTEKTKIYRQXGEQ 102
           K+A K  P K K       FK +    D     +K KIY Q GE+
Sbjct: 26  KMALKYHPDKNKEAGAENKFKEIAEAYDVLSDDKKKKIYDQFGEE 70


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,560,708
Number of Sequences: 27780
Number of extensions: 271435
Number of successful extensions: 572
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)