Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_B01
         (754 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   1.3  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    23   2.3  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    23   3.1  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   4.1  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   5.4  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    22   5.4  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 211 RKEREVVVMDTSSP*TLHPISKGRQKKRK 125
           RKE  ++  D+S   T+ P+S   Q  RK
Sbjct: 84  RKEVSIITEDSSRKQTIDPLSSNTQITRK 112


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +3

Query: 300 INVKNRFQVMRIIGSQVTFEGFFCRLIQEIVSRDKFF*L*LYI 428
           +N+KN F V+ +I + +      C + ++I S    + L LY+
Sbjct: 2   LNMKNIFPVLFVIINVLLHGQVICFVCKDITSTSALYRLKLYL 44


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 91  SFSYCSPFCLYIFVFS 138
           +FSYC P  L I+ +S
Sbjct: 217 TFSYCIPMILIIYYYS 232


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 81  HQLIVFLLFPXLSVYFRFFCLPFEIGWSV 167
           H +++ L    L V   F  +P EIGW++
Sbjct: 74  HIMLMHLAIADLLV--TFLMMPLEIGWAI 100


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/25 (36%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
 Frame = -3

Query: 623 WTSMILPDDPXGIHPIGXGKN-CEG 552
           WT+   P  P  + P G G+  C G
Sbjct: 444 WTTPTTPHSPLLVAPFGAGRRICPG 468


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -2

Query: 210 EKKGRWWLWILQVLKRSIRFQKED 139
           E+KG   L+ +++LK+ I  Q +D
Sbjct: 4   ERKGTDELYAIKILKKDIIIQDDD 27


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,457
Number of Sequences: 438
Number of extensions: 3273
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)