BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_A21
(792 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46389-1|CAA86523.1| 380|Homo sapiens vasodilator-stimulated ph... 30 8.3
X98534-1|CAA67147.2| 378|Homo sapiens vasodilator-stimulated ph... 30 8.3
BC080610-1|AAH80610.1| 466|Homo sapiens Unknown (protein for IM... 30 8.3
BC038224-1|AAH38224.1| 380|Homo sapiens vasodilator-stimulated ... 30 8.3
BC026019-1|AAH26019.1| 380|Homo sapiens vasodilator-stimulated ... 30 8.3
AY149237-1|AAN41263.1| 1860|Homo sapiens collagen XXVII proalpha... 30 8.3
AL445543-2|CAI14773.1| 714|Homo sapiens collagen type XXVII alp... 30 8.3
AL445543-1|CAI14772.1| 1860|Homo sapiens collagen type XXVII alp... 30 8.3
AL356796-1|CAI16857.1| 1860|Homo sapiens collagen type XXVII alp... 30 8.3
>Z46389-1|CAA86523.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein (VASP) protein.
Length = 380
Score = 30.3 bits (65), Expect = 8.3
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 330 ERRGRSADXXPLXXTXTPPXPRXPXPXXPXTPPXXLPXPG 449
ERR +A P PP P P P PP LP G
Sbjct: 153 ERRVSNAGGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPSG 192
>X98534-1|CAA67147.2| 378|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 378
Score = 30.3 bits (65), Expect = 8.3
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 330 ERRGRSADXXPLXXTXTPPXPRXPXPXXPXTPPXXLPXPG 449
ERR +A P PP P P P PP LP G
Sbjct: 151 ERRVSNAGGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPSG 190
>BC080610-1|AAH80610.1| 466|Homo sapiens Unknown (protein for
IMAGE:5480483) protein.
Length = 466
Score = 30.3 bits (65), Expect = 8.3
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 327 PERRGRSADXXPLXXTXTPPXPRXPXPXXPXTPPXXL 437
P R G++A PL T P PR P P TP L
Sbjct: 319 PLRPGKAARDVPLSDLTTRPSPRQPQPSQQTTPALVL 355
>BC038224-1|AAH38224.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 380
Score = 30.3 bits (65), Expect = 8.3
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 330 ERRGRSADXXPLXXTXTPPXPRXPXPXXPXTPPXXLPXPG 449
ERR +A P PP P P P PP LP G
Sbjct: 153 ERRVSNAGGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPSG 192
>BC026019-1|AAH26019.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 380
Score = 30.3 bits (65), Expect = 8.3
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 330 ERRGRSADXXPLXXTXTPPXPRXPXPXXPXTPPXXLPXPG 449
ERR +A P PP P P P PP LP G
Sbjct: 154 ERRVSNAGGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPSG 193
>AY149237-1|AAN41263.1| 1860|Homo sapiens collagen XXVII proalpha 1
chain precursor protein.
Length = 1860
Score = 30.3 bits (65), Expect = 8.3
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 327 PERRGRSADXXPLXXTXTPPXPRXPXPXXPXTPPXXL 437
P R G++A PL T P PR P P TP L
Sbjct: 556 PLRPGKAARDVPLSDLTTRPSPRQPQPSQQTTPALVL 592
>AL445543-2|CAI14773.1| 714|Homo sapiens collagen type XXVII alpha
1 protein.
Length = 714
Score = 30.3 bits (65), Expect = 8.3
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 327 PERRGRSADXXPLXXTXTPPXPRXPXPXXPXTPPXXL 437
P R G++A PL T P PR P P TP L
Sbjct: 503 PLRPGKAARDVPLSDLTTRPSPRQPQPSQQTTPALVL 539
>AL445543-1|CAI14772.1| 1860|Homo sapiens collagen type XXVII alpha
1 protein.
Length = 1860
Score = 30.3 bits (65), Expect = 8.3
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 327 PERRGRSADXXPLXXTXTPPXPRXPXPXXPXTPPXXL 437
P R G++A PL T P PR P P TP L
Sbjct: 556 PLRPGKAARDVPLSDLTTRPSPRQPQPSQQTTPALVL 592
>AL356796-1|CAI16857.1| 1860|Homo sapiens collagen type XXVII alpha
1 protein.
Length = 1860
Score = 30.3 bits (65), Expect = 8.3
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 327 PERRGRSADXXPLXXTXTPPXPRXPXPXXPXTPPXXL 437
P R G++A PL T P PR P P TP L
Sbjct: 556 PLRPGKAARDVPLSDLTTRPSPRQPQPSQQTTPALVL 592
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,511,985
Number of Sequences: 237096
Number of extensions: 1179127
Number of successful extensions: 7814
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5937
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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