Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_A19
(754 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25B2.11 |pof2||F-box protein Pof2|Schizosaccharomyces pombe|... 60 3e-10
SPAC6F6.02c |pof5||F-box protein Pof5|Schizosaccharomyces pombe|... 29 0.94
SPCC330.02 |rhp7|SPCC613.14|Rad7 homolog Rhp7|Schizosaccharomyce... 28 1.2
SPAC3A11.11c |||pyridoxal reductase |Schizosaccharomyces pombe|c... 28 1.2
SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|c... 28 1.6
SPBPB2B2.05 |||GMP synthase [glutamine-hydrolyzing] |Schizosacch... 27 2.2
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 27 2.2
>SPBC25B2.11 |pof2||F-box protein Pof2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 60.1 bits (139), Expect = 3e-10
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Frame = -1
Query: 478 ERGXLRALDVSFCDKVGDEELSXATXGLSGXRXLXISAC-RLTDEGLERVGRLSQ-LETL 305
E +RAL ++ + D ++ T S L +S C LTD L + +LSQ L TL
Sbjct: 249 ELDAMRALSLNNLPDLKDSDIELITCKFSKLNSLFLSKCIGLTDSSLLSLTKLSQSLTTL 308
Query: 304 NIGQCTKVTDRGLRALGEGLRNLKAIDLYGCTGITPQGLDHIVKLPRLSVLNL 146
++G C ++TD G++ L + +N+ ID GC ++ + I KLP L + L
Sbjct: 309 HLGHCYEITDIGVQCLLKSCKNITYIDFGGCLRLSDIAVSAIAKLPYLQRVGL 361
Score = 37.1 bits (82), Expect = 0.003
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Frame = -1
Query: 466 LRALDVSFCDKVGDEELSXATXGLSGXRXLXISAC-RLTDEGLERVGRLSQLETLNIGQC 290
L L + C ++ D + + C RL+D + + +L L+ + + +C
Sbjct: 305 LTTLHLGHCYEITDIGVQCLLKSCKNITYIDFGGCLRLSDIAVSAIAKLPYLQRVGLVKC 364
Query: 289 TKVTDRGLRAL-GEGLRNLKAIDLYGCTGITPQGLDHIV 176
+TD + L G RNL+ + L C G+T + + +++
Sbjct: 365 ICLTDLSVILLSGSFSRNLERVHLSYCIGLTAKSVSYLM 403
Score = 31.1 bits (67), Expect = 0.18
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -1
Query: 385 RXLXISACRLT-DEGLERV-GRLSQLETLNIGQCTKVTDRGLRALGEGLRNLKAIDLYGC 212
+ L I C L D G+ ++ R L L I C K+TD L+ L E +L +D+ GC
Sbjct: 149 KALNIGNCGLVEDTGMVQIIKRCPYLNRLIIPNCRKLTDVSLQILSE-KEDLIELDISGC 207
Query: 211 TG 206
G
Sbjct: 208 EG 209
Score = 29.1 bits (62), Expect = 0.71
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Frame = -1
Query: 466 LRALDVSFCDK-VGDEELSXATXGLSGXRXLXISACRLTDEGLERVGRLS----QLETLN 302
LR L+ S K + D+ L T +G L +S C E L +G+L L T+N
Sbjct: 70 LRKLNCSRVRKFLTDKHLMLMTLA-TGISRLNLSGCTRISEPL--IGKLLYQNLNLVTIN 126
Query: 301 IGQCTKVTDRGLRALGEGLRNLKAIDLYGCTGITPQGLDHIVK 173
+ L + + NLKA+++ C + G+ I+K
Sbjct: 127 FSNIFSLPANILEYISDNCPNLKALNIGNCGLVEDTGMVQIIK 169
>SPAC6F6.02c |pof5||F-box protein Pof5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 348
Score = 28.7 bits (61), Expect = 0.94
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = -1
Query: 358 LTDEGLERVGRLSQLETLNIGQCTKVTDRGLRALGEGL-RNLKAIDL-YGCTGITPQGLD 185
LTD+ L L+++NI QC +TD G+ +L + NL ++ + Y ++ GLD
Sbjct: 183 LTDDFLAESVFPPSLKSINITQCPLLTDAGIFSLLSKIGPNLSSVCVQYPMPELSRSGLD 242
Query: 184 HIVKL-PRLSVLNL 146
I +L P + +++
Sbjct: 243 CIFQLCPNATTISI 256
>SPCC330.02 |rhp7|SPCC613.14|Rad7 homolog Rhp7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 563
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -1
Query: 343 LERVGRLSQLETLNIGQCTKVTDRGLR-ALGEGLRNLKAIDLYGCTGIT 200
L ++G S L TL++ CTK+TD L+ +G LK ++L G +T
Sbjct: 394 LNQIG--SGLHTLSLSGCTKLTDEVLKQGIGPCCGRLKHLNLSGLELLT 440
>SPAC3A11.11c |||pyridoxal reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 334
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 313 ETLNIGQCTKVTDRGLRALGEGLRNLKAIDLYGCTGITP 197
ET + + + ++ + E L+ +K IDLY C I P
Sbjct: 89 ETHRVHGTRECITKSIKTVRETLKKVKTIDLYQCAAIDP 127
>SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 577
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -1
Query: 316 LETLNIGQCTKVTDRGLRALGEGLRNLKAIDLYGCTGITPQGLD 185
L+ +N + G A+ GL+ LK ID+ C ++ +D
Sbjct: 505 LKYVNFSNSISLDGSGFIAVLRGLKELKRIDIINCDSVSRDAID 548
>SPBPB2B2.05 |||GMP synthase [glutamine-hydrolyzing]
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 237
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -1
Query: 358 LTDEGLERVGRLSQLETLNIGQCTKVTDRGLRALGEGLRNLKAIDLYGCTGI 203
L + + + G+L + N+ + D+G++ LG GL++ D C GI
Sbjct: 120 LAHKVMAKPGKLKNILGSNVIDVNSIHDQGIKTLGMGLQSTVISDDGLCEGI 171
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +2
Query: 92 RTHTQQLARVWSPHMPQTEVKYTEPRQLHDMVQALRSYARATVQIYRL 235
++H A + + + EV T+P+Q+ +V + + AT +Y+L
Sbjct: 65 KSHADPFAHIADAILAEEEVASTQPKQITSVVASADALFFATPHLYKL 112
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,111,428
Number of Sequences: 5004
Number of extensions: 35015
Number of successful extensions: 105
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 104
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 359287726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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