Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_A13
(827 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.005
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.012
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 0.23
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 25 0.93
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.1
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.4
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.2
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 3.2
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 4.3
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 5.7
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 7.5
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 7.5
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 25 9.9
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.3 bits (80), Expect = 0.005
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -1
Query: 686 PPPPPXNPXXXXXTPPPPPPXP 621
PPPPP P PPPPPP P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPP 782
Score = 33.5 bits (73), Expect = 0.037
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 686 PPPPPXNPXXXXXTPPPPPPXPXTXGXXKKKXXP 585
PPPPP PPPPPP P + P
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAP 795
Score = 33.1 bits (72), Expect = 0.049
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -1
Query: 749 PXXXPRXKXXSSPXXXXXXXTPPPPPXNPXXXXXTPPPPPPXPXTXG 609
P P P PPPPP PPPPPP + G
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 29.1 bits (62), Expect = 0.80
Identities = 22/66 (33%), Positives = 23/66 (34%), Gaps = 5/66 (7%)
Frame = -1
Query: 689 TPPPPPXNPXXXXXTPPP-----PPPXPXTXGXXKKKXXPXNXXFXLXGGXXXGGXXPPR 525
+PPPPP P TP P PPP P G P G G PP
Sbjct: 731 SPPPPP--PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP---------GVAGAGPPPPP 779
Query: 524 AXPPGV 507
PP V
Sbjct: 780 PPPPAV 785
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 35.1 bits (77), Expect = 0.012
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -1
Query: 686 PPPPPXNPXXXXXTPPPPPPXPXTXGXXKKK 594
PPPPP P + PPPPP P K K
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGYVKKRKNK 39
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -1
Query: 683 PPPPXNPXXXXXTPPPPPPXPXTXGXXKKKXXP 585
PPPP P PPPP P +K P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 25.8 bits (54), Expect(2) = 0.64
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 648 NPPPPPPXP 622
NPPPPPP P
Sbjct: 8 NPPPPPPPP 16
Score = 21.8 bits (44), Expect(2) = 0.64
Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 2/25 (8%)
Frame = -3
Query: 645 PP--PPPPXPXXRRIXKKKKXPRXS 577
PP PPPP P +K K P S
Sbjct: 20 PPSQPPPPPPPGYVKKRKNKTPAQS 44
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.4 bits (53), Expect(2) = 0.23
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 647 TPPPPPPXP 621
TPPPPPP P
Sbjct: 906 TPPPPPPLP 914
Score = 23.8 bits (49), Expect(2) = 0.23
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -1
Query: 644 PPPPPPXPXTXGXXKKKXXP 585
PPPPPP P K P
Sbjct: 946 PPPPPPPPLVSAAGGKFVSP 965
Score = 23.4 bits (48), Expect(2) = 3.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 644 PPPPPPXP 621
PPPPPP P
Sbjct: 945 PPPPPPPP 952
Score = 21.4 bits (43), Expect(2) = 3.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 689 TPPPPPXNP 663
TPPPPP P
Sbjct: 906 TPPPPPPLP 914
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 25.4 bits (53), Expect(2) = 0.93
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 647 TPPPPPPXP 621
TPPPPPP P
Sbjct: 239 TPPPPPPRP 247
Score = 21.8 bits (44), Expect(2) = 0.93
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = -1
Query: 737 PRXKXXSSPXXXXXXXTPPPPP 672
P + +SP PPPPP
Sbjct: 224 PEFQQTTSPIFSSSSTPPPPPP 245
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 8/51 (15%)
Frame = -1
Query: 749 PXXXPRXKXXSSPXXXXXXXTPPPPPXNPXXXXXTPP--------PPPPXP 621
P P + S+ TPPPPP + PP PPPP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.4
Identities = 18/61 (29%), Positives = 19/61 (31%), Gaps = 10/61 (16%)
Frame = -1
Query: 773 PXXEXTGKPXXXPRXKXXSSPXXXXXXXTPPPPPXNPXXXXXTPP----------PPPPX 624
P T KP P S+ PPPPP PP PPPP
Sbjct: 282 PAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPP 341
Query: 623 P 621
P
Sbjct: 342 P 342
Score = 25.4 bits (53), Expect = 9.9
Identities = 14/48 (29%), Positives = 15/48 (31%), Gaps = 2/48 (4%)
Frame = -1
Query: 758 TGKPXXXPRXKXXSSPXXXXXXXTPPPPPXNP--XXXXXTPPPPPPXP 621
T P P P P PPP P +PP PP P
Sbjct: 227 TSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 25.4 bits (53), Expect = 9.9
Identities = 13/40 (32%), Positives = 13/40 (32%), Gaps = 1/40 (2%)
Frame = -1
Query: 749 PXXXPRXKXXSS-PXXXXXXXTPPPPPXNPXXXXXTPPPP 633
P PR S P PPPPP PPP
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.5 bits (58), Expect = 2.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 623 GXGGGGGGFXXXXRGSXGGGGG 688
G GGG GGF G GG GG
Sbjct: 225 GFGGGPGGFEGGPGGFGGGPGG 246
Score = 27.5 bits (58), Expect = 2.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 623 GXGGGGGGFXXXXRGSXGGGGG 688
G GGG GGF G GG GG
Sbjct: 239 GFGGGPGGFGGGLGGFGGGPGG 260
Score = 26.6 bits (56), Expect = 4.3
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 623 GXGGGGGGFXXXXRGSXGGGGG 688
G GGG GGF G GG GG
Sbjct: 246 GFGGGLGGFGGGPGGFGGGPGG 267
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 3.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -1
Query: 680 PPPXNPXXXXXTPPPPPPXPXT 615
PP P P PPPP P T
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPT 245
Score = 26.6 bits (56), Expect = 4.3
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -2
Query: 646 PPPPPPPXXXPXDXXKKKXP 587
PPPPPPP P + P
Sbjct: 238 PPPPPPPTLPPQSTNTSQLP 257
Score = 25.8 bits (54), Expect = 7.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 648 NPPPPPPXP 622
NPPPPPP P
Sbjct: 188 NPPPPPPPP 196
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 623 GXGGGGGGFXXXXRGSXGGG 682
G GG GGF RG GGG
Sbjct: 146 GRGGSRGGFGGNSRGGFGGG 165
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 26.6 bits (56), Expect = 4.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -1
Query: 683 PPPPXNPXXXXXTPPPP 633
PPPP P PPPP
Sbjct: 139 PPPPVRPNVMSQMPPPP 155
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 623 GXGGGGGGFXXXXRGSXGGGGG 688
G GG GGF G+ GGG G
Sbjct: 20 GFNGGRGGFGGGRGGARGGGRG 41
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 7.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -1
Query: 689 TPPPPPXNPXXXXXTPPPPPP 627
TP PP P PPPPP
Sbjct: 728 TPAPPTPAPTPAVKHHPPPPP 748
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 7.5
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -1
Query: 686 PPPPPXNPXXXXXTPPPP 633
PPPPP P P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 25.4 bits (53), Expect = 9.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -3
Query: 645 PPPPPPXPXXRRIXKKKKXP 586
PPPPPP P K P
Sbjct: 306 PPPPPPPPPSNDFWKDSNEP 325
Score = 25.4 bits (53), Expect = 9.9
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -1
Query: 644 PPPPPPXPXTXGXXKKKXXP 585
PPPPPP P + K P
Sbjct: 306 PPPPPPPPPSNDFWKDSNEP 325
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,715,644
Number of Sequences: 5004
Number of extensions: 22150
Number of successful extensions: 346
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 406444570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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