Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_A01
(799 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U73737-1|AAB47425.1| 1360|Homo sapiens hMSH6 protein. 32 2.8
BC066547-1|AAH66547.1| 210|Homo sapiens hypothetical gene suppo... 32 2.8
U54777-1|AAB39212.2| 1360|Homo sapiens hMSH6 protein protein. 31 3.6
U28946-1|AAC50461.1| 1360|Homo sapiens G/T mismatch binding prot... 31 3.6
BC104665-1|AAI04666.1| 252|Homo sapiens MSH6 protein protein. 31 3.6
BC004246-1|AAH04246.1| 1360|Homo sapiens mutS homolog 6 (E. coli... 31 3.6
AY082894-1|AAL87401.1| 1358|Homo sapiens mutS homolog 6 (E. coli... 31 3.6
M11437-2|AAB59550.1| 644|Homo sapiens kininogen protein. 31 6.4
M11437-1|AAB59551.1| 427|Homo sapiens kininogen protein. 31 6.4
K02566-1|AAA35497.1| 427|Homo sapiens protein ( Human alpha-2-t... 31 6.4
BC060039-1|AAH60039.1| 427|Homo sapiens kininogen 1 protein. 31 6.4
AY248697-1|AAO61092.1| 427|Homo sapiens kininogen protein. 31 6.4
AK223589-1|BAD97309.1| 427|Homo sapiens kininogen 1 variant pro... 31 6.4
>U73737-1|AAB47425.1| 1360|Homo sapiens hMSH6 protein.
Length = 1360
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 174 PTSDLSPGSEPVQSRGVPAVNTTTRHAAPPRGRPTDGSLRR 296
P + SPG + S P R A+PP+ + +G LRR
Sbjct: 38 PEASPSPGGDAAWSEAGPGPRPLARSASPPKAKNLNGGLRR 78
>BC066547-1|AAH66547.1| 210|Homo sapiens hypothetical gene
supported by BC066547 protein.
Length = 210
Score = 31.9 bits (69), Expect = 2.8
Identities = 30/90 (33%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +3
Query: 21 SGRGPNLLRGPRA*GARGVCETQRSAGVESRSRAQGILGPTH*TTPLALLHPTS-DLSPG 197
S +GP L RGP A GV +AG+ R +G TTP HP L PG
Sbjct: 131 SSQGPGLWRGPAA-RKEGVARVGVAAGLRLRPWGRG-----RKTTPALSGHPARFPLQPG 184
Query: 198 SEPVQSRGVPAVNTTTRHAAPPRGRPTDGS 287
+SR A+ T + PRG G+
Sbjct: 185 DSRERSRNHRALELTWQ----PRGAKAGGA 210
>U54777-1|AAB39212.2| 1360|Homo sapiens hMSH6 protein protein.
Length = 1360
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 174 PTSDLSPGSEPVQSRGVPAVNTTTRHAAPPRGRPTDGSLRR 296
P + SPG + S P R A+PP+ + +G LRR
Sbjct: 38 PGASPSPGGDAAWSEAGPGPRPLARSASPPKAKNLNGGLRR 78
>U28946-1|AAC50461.1| 1360|Homo sapiens G/T mismatch binding protein
protein.
Length = 1360
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 174 PTSDLSPGSEPVQSRGVPAVNTTTRHAAPPRGRPTDGSLRR 296
P + SPG + S P R A+PP+ + +G LRR
Sbjct: 38 PGASPSPGGDAAWSEAGPGPRPLARSASPPKAKNLNGGLRR 78
>BC104665-1|AAI04666.1| 252|Homo sapiens MSH6 protein protein.
Length = 252
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 174 PTSDLSPGSEPVQSRGVPAVNTTTRHAAPPRGRPTDGSLRR 296
P + SPG + S P R A+PP+ + +G LRR
Sbjct: 38 PGASPSPGGDAAWSEAGPGPRPLARSASPPKAKNLNGGLRR 78
>BC004246-1|AAH04246.1| 1360|Homo sapiens mutS homolog 6 (E. coli)
protein.
Length = 1360
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 174 PTSDLSPGSEPVQSRGVPAVNTTTRHAAPPRGRPTDGSLRR 296
P + SPG + S P R A+PP+ + +G LRR
Sbjct: 38 PGASPSPGGDAAWSEAGPGPRPLARSASPPKAKNLNGGLRR 78
>AY082894-1|AAL87401.1| 1358|Homo sapiens mutS homolog 6 (E. coli)
protein.
Length = 1358
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 174 PTSDLSPGSEPVQSRGVPAVNTTTRHAAPPRGRPTDGSLRR 296
P + SPG + S P R A+PP+ + +G LRR
Sbjct: 38 PGASPSPGGDAAWSEAGPGPRPLARSASPPKAKNLNGGLRR 78
>M11437-2|AAB59550.1| 644|Homo sapiens kininogen protein.
Length = 644
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 159 LALLHPTSDLSPGSEPVQSRGVPAVNTTTRHAA 257
L +HP S SP EP+ G+ N T+H++
Sbjct: 143 LGCVHPISTQSPDLEPILRHGIQYFNNNTQHSS 175
>M11437-1|AAB59551.1| 427|Homo sapiens kininogen protein.
Length = 427
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 159 LALLHPTSDLSPGSEPVQSRGVPAVNTTTRHAA 257
L +HP S SP EP+ G+ N T+H++
Sbjct: 143 LGCVHPISTQSPDLEPILRHGIQYFNNNTQHSS 175
>K02566-1|AAA35497.1| 427|Homo sapiens protein ( Human
alpha-2-thiol proteinase inhibitor mRNA, complete coding
sequence. ).
Length = 427
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 159 LALLHPTSDLSPGSEPVQSRGVPAVNTTTRHAA 257
L +HP S SP EP+ G+ N T+H++
Sbjct: 143 LGCVHPISTQSPDLEPILRHGIQYFNNNTQHSS 175
>BC060039-1|AAH60039.1| 427|Homo sapiens kininogen 1 protein.
Length = 427
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 159 LALLHPTSDLSPGSEPVQSRGVPAVNTTTRHAA 257
L +HP S SP EP+ G+ N T+H++
Sbjct: 143 LGCVHPISTQSPDLEPILRHGIQYFNNNTQHSS 175
>AY248697-1|AAO61092.1| 427|Homo sapiens kininogen protein.
Length = 427
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 159 LALLHPTSDLSPGSEPVQSRGVPAVNTTTRHAA 257
L +HP S SP EP+ G+ N T+H++
Sbjct: 143 LGCVHPISTQSPDLEPILRHGIQYFNNNTQHSS 175
>AK223589-1|BAD97309.1| 427|Homo sapiens kininogen 1 variant
protein.
Length = 427
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 159 LALLHPTSDLSPGSEPVQSRGVPAVNTTTRHAA 257
L +HP S SP EP+ G+ N T+H++
Sbjct: 143 LGCVHPISTQSPDLEPILRHGIQYFNNNTQHSS 175
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,240,885
Number of Sequences: 237096
Number of extensions: 2089157
Number of successful extensions: 6316
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6253
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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