Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_P23
         (915 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1195 - 9567023-9567789,9567871-9568120                           35   0.10 
06_03_0854 + 25400855-25403741,25406174-25407708                       29   5.2  

>01_01_1195 - 9567023-9567789,9567871-9568120
          Length = 338

 Score = 34.7 bits (76), Expect = 0.10
 Identities = 20/48 (41%), Positives = 25/48 (52%)
 Frame = -3

Query: 352 YNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GHSHHLPWSHQPCGY 209
           +  R  SSS+ S  PA +P P P  VV+L     H HH  +S Q  GY
Sbjct: 157 FRRRKPSSSSASPAPAPAPPPPPQPVVAL-----HHHHHRYSQQYSGY 199


>06_03_0854 + 25400855-25403741,25406174-25407708
          Length = 1473

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 394 AKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 269
           AKR+PT  T    P  AR  +++   +F   +P P P +V+S
Sbjct: 475 AKRAPTAVTVGAPPPQARTPAAAPAKAF-VSAPAPAPSSVIS 515


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,232,990
Number of Sequences: 37544
Number of extensions: 322004
Number of successful extensions: 1037
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)