Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_P19
(858 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431... 264 8e-71
07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609... 261 6e-70
03_01_0520 - 3900387-3900613,3900812-3900853,3902092-3902210,390... 31 0.89
03_02_0792 + 11236785-11237337,11237711-11238261,11238446-112386... 30 2.7
11_05_0076 - 18861629-18861862,18862421-18862532,18863001-18863146 29 4.7
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119... 29 6.3
09_06_0103 + 20873310-20873382,20873530-20873735 29 6.3
08_01_0152 - 1190358-1190462,1190648-1190765,1191134-1192691,119... 28 8.3
01_06_0902 + 32853708-32853739,32854787-32855596,32856094-328561... 28 8.3
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 28 8.3
>03_01_0582 -
4318837-4318967,4319219-4319399,4319504-4319701,
4319791-4320053,4320453-4320597
Length = 305
Score = 264 bits (646), Expect = 8e-71
Identities = 127/215 (59%), Positives = 157/215 (73%), Gaps = 1/215 (0%)
Frame = +1
Query: 55 ISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWE 234
++A G L+ E+DV MLAA HLG +N +FQME YVYKRR+DG ++INL +TWE
Sbjct: 1 MAAVAGGAARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWE 60
Query: 235 KLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQTQAAF 414
KL LAAR +VAIENP D+ V S+RP+GQRAVLKFA +TGA IAGR TPG FTNQ Q +F
Sbjct: 61 KLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 120
Query: 415 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWW 594
EPRLLI+ DP DHQPI E++ NIP IA C+TDSP+R+VDI IP N K +SIG ++W
Sbjct: 121 SEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFW 180
Query: 595 LLAREVLRLRG-VLPVTSAGMLW*LVLYRDPEXVK 696
LLAR VL++RG +LP ++ L YRDPE K
Sbjct: 181 LLARMVLQMRGTILPGHKWDVMVDLFFYRDPEEAK 215
>07_03_1272 -
25360180-25360286,25360454-25360658,25360748-25360945,
25361034-25361296,25361865-25362009
Length = 305
Score = 261 bits (639), Expect = 6e-70
Identities = 124/210 (59%), Positives = 152/210 (72%), Gaps = 1/210 (0%)
Frame = +1
Query: 88 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 267
L+ E+D+ MLAA HLG +N +FQME YVYKRR DG ++INL +TWEKL LAAR +VA
Sbjct: 12 LSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIVA 71
Query: 268 IENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQTQAAFREPRLLIVLDP 447
IENP D+ V S+RP+GQRAVLKFA +TGA IAGR TPG FTNQ Q +F EPRLLI+ DP
Sbjct: 72 IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDP 131
Query: 448 AQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRG 627
DHQPI E++ NIP IA C+TDSP+R+VDI IP N K SIG ++WLLAR VL++RG
Sbjct: 132 RTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRG 191
Query: 628 -VLPVTSAGMLW*LVLYRDPEXVKRMNTSQ 714
+LP ++ L YRDPE K +
Sbjct: 192 TILPGHKWDVMVDLFFYRDPEEAKEQEEEE 221
>03_01_0520 -
3900387-3900613,3900812-3900853,3902092-3902210,
3903633-3903712,3903829-3903856,3904151-3904272,
3904714-3904857,3904897-3906327
Length = 730
Score = 31.5 bits (68), Expect = 0.89
Identities = 25/76 (32%), Positives = 28/76 (36%)
Frame = -1
Query: 798 FQPMXHGSRFIPXSGQSXTFX*LYHTXFLACVHPFHXFRVTVEDQSPQHPSAGHGKHTTK 619
FQ HG F P G + YH +A HP V ED P H
Sbjct: 99 FQQHPHGPLFDPNVGHLLSTNQTYHGGQVALSHPNSVMPVPGEDSFPLQ----QNHHQQY 154
Query: 618 PQHFTCQQPPHQTNRV 571
QH QQ HQ NR+
Sbjct: 155 QQHHHQQQYEHQ-NRI 169
>03_02_0792 +
11236785-11237337,11237711-11238261,11238446-11238628,
11238768-11238966,11239055-11239761
Length = 730
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 343 HTGATPIAGRFTPGAFTNQTQAAFREPRLLI--VLDPAQDHQPITEASYVNIPVIALCNT 516
HT +T R TP AF + T AA E R+ + + ++ EA Y +I V + +
Sbjct: 270 HTLSTGETVRVTPAAFDSVTPAAIDETRVAVAAIRQKSEFSDVRVEAQYRHIEVFDMRSP 329
Query: 517 DSPLR 531
+ P++
Sbjct: 330 EQPMQ 334
>11_05_0076 - 18861629-18861862,18862421-18862532,18863001-18863146
Length = 163
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 5/72 (6%)
Frame = -2
Query: 770 SFQXQDRAXLLXSCTTPXSWLVFI-----LFTXSGSR*RTNHHNIPALVTGSTPRSLSTS 606
S + R L T P W++ + L T SG TN P LSTS
Sbjct: 77 SASLEKRQPALLLPTWPWWWMMLLQLQQPLLTTSGLDAATNCARAVPSFDRDRPNFLSTS 136
Query: 605 RANNHHIKPIEW 570
+ +NH ++ I W
Sbjct: 137 KKHNHELQLINW 148
>11_06_0458 + 23808402-23808469,23808800-23809684,23810011-23811961,
23812210-23812285,23813064-23813072,23813243-23813335,
23813578-23813581,23813780-23814703,23814926-23815909,
23816073-23816118,23816376-23816951,23817253-23817798,
23817820-23818416
Length = 2252
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 155 TFSAPRWVVAASILVTSSSLRASTSNP 75
TF A RWV+AA V + L AS S+P
Sbjct: 2100 TFHAHRWVLAARSPVLKAKLSASPSSP 2126
>09_06_0103 + 20873310-20873382,20873530-20873735
Length = 92
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +3
Query: 333 VCRAHRCYAYC---GTFHTRCFY*PDPSCIP*TSSLDCI 440
+CR+ RC YC G RC + DPS ++ +C+
Sbjct: 45 LCRSTRCNQYCVSEGATRGRCGFSSDPSATALKNATECL 83
>08_01_0152 -
1190358-1190462,1190648-1190765,1191134-1192691,
1193338-1193530
Length = 657
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -3
Query: 337 QTSVQHADRRAVMR*RTHQRGSRWLRQHEQPEQVFPRYDAS*SHGYHQHVVC 182
+ SV + D+ ++ RT RGS L QPE + PRY+ H VC
Sbjct: 269 KNSVNNDDKPMLVSIRTKGRGSSTLPSIAQPEPL-PRYNKHWRRKAHSMCVC 319
>01_06_0902 +
32853708-32853739,32854787-32855596,32856094-32856157,
32856375-32856446
Length = 325
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 162 PDGDLCLQTTC*WYPCDQLASYLGKTCSGCSCCRSH 269
P +C+ T C C K CS CSC + H
Sbjct: 265 PQNSVCMVTLCTSEICSGRRYAAKKLCSACSCHKRH 300
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 28.3 bits (60), Expect = 8.3
Identities = 22/78 (28%), Positives = 27/78 (34%)
Frame = +3
Query: 108 CHQNACCNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSCCRSHREPR*C 287
CH C P GR+ P G + CD A+ G TC C H+ P C
Sbjct: 324 CHAGKCGGCPLQGRRT-CPCGKKDYPSL----DCDAEAATCGSTCEKVLGCGRHKCPERC 378
Query: 288 VRHLITALRSACCTEVCR 341
R T+ CR
Sbjct: 379 HRGSCVETCRLVITKSCR 396
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,231,789
Number of Sequences: 37544
Number of extensions: 639319
Number of successful extensions: 1524
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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