Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_P16
(860 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.007
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.007
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 34 0.030
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 0.068
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 29 0.85
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 25 0.94
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.5
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 28 1.5
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 3.4
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 3.4
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 4.5
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 4.5
SPCC63.08c |ppk36|atg1|serine/threonine protein kinase Ppk36|Sch... 26 6.0
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 7.9
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.9 bits (79), Expect = 0.007
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2
Query: 511 PPPPPPPXGXXKKKPPPXPIXFXSXXPPPP 422
PPPPPPP + KPP S PPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPP 340
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 511 PPPPPPPXGXXKKKPPPXPIXFXSXXPPPP 422
PPPPPPP P P + PPPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = -2
Query: 520 GXXPPPPPPPXGXXK--KKPPPXPIXFXSXXPPPP 422
G PPPPPP ++PPP PP P
Sbjct: 357 GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAP 391
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.007
Identities = 16/30 (53%), Positives = 16/30 (53%)
Frame = -2
Query: 511 PPPPPPPXGXXKKKPPPXPIXFXSXXPPPP 422
PPPPPPP G PPP P PPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPP-------PPPP 783
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 511 PPPPPPPXGXXKKKPPPXPIXFXSXXPPPP 422
P PPP P PPP P + PPPP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 31.5 bits (68), Expect = 0.16
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 6/36 (16%)
Frame = -2
Query: 511 PPPPPP------PXGXXKKKPPPXPIXFXSXXPPPP 422
PPPPPP P PPP PI PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 30.7 bits (66), Expect = 0.28
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -2
Query: 508 PPPPPPXGXXKKKPPPXPIXFXSXXPPPP 422
PPP P G PPP + PPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 511 PPPPPPPXGXXKKKPPPXPIXFXSXXPPPP 422
PPP P G PPP PPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 511 PPPPPPPXGXXKKKPPPXPIXFXSXXPPPP 422
P P PPP PPP P + PPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.9 bits (74), Expect = 0.030
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 520 GXXPPPPPPPXGXXKKKPPPXP 455
G PPPPPPP +PPP P
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPP 28
Score = 29.1 bits (62), Expect = 0.85
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2
Query: 511 PPPPPPPXGXXKKKPPPXP 455
PPPPPP + PPP P
Sbjct: 11 PPPPPPGFEPPSQPPPPPP 29
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 508 PPPPPPXGXXKKKPPPXP 455
PPPPPP G KK+ P
Sbjct: 24 PPPPPPPGYVKKRKNKTP 41
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 4.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 512 PPPPPPPP 489
PPPPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 26.6 bits (56), Expect(2) = 0.068
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 512 PPPPPPPP 489
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 24.6 bits (51), Expect(2) = 0.068
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 509 PPPPPPPXXXXKKT 468
PPPPPPP + T
Sbjct: 238 PPPPPPPTLPPQST 251
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 29.1 bits (62), Expect = 0.85
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 512 PPPPPPPPXXXXKK 471
PPPPPPPP KK
Sbjct: 1095 PPPPPPPPAEVEKK 1108
Score = 26.2 bits (55), Expect = 6.0
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 510 PPPPPPPXGXXKKN 469
PPPPPPP KK+
Sbjct: 1096 PPPPPPPAEVEKKD 1109
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 24.6 bits (51), Expect(2) = 0.94
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 521 GXXPPPPPPPP 489
G PPPPPP P
Sbjct: 353 GSRPPPPPPMP 363
Score = 22.6 bits (46), Expect(2) = 0.94
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = -1
Query: 512 PPPPPPPPXXXXKKTPPXP 456
PPPP P P P P
Sbjct: 358 PPPPMPAPIYNVPNVPTVP 376
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 508 PPPPPPXGXXKKKPPPXPIXFXSXXPPP 425
PPPPP PP P S PPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Frame = -2
Query: 511 PPP--PPPPXGXXKKKPPPXPIXFXSXXPPP 425
PPP PP P G PPP P P P
Sbjct: 1716 PPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 28.3 bits (60), Expect = 1.5
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1
Query: 521 GXXPPPPPPPP 489
G PPPPPPPP
Sbjct: 303 GGLPPPPPPPP 313
Score = 28.3 bits (60), Expect = 1.5
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1
Query: 521 GXXPPPPPPPP 489
G PPPPPPPP
Sbjct: 304 GLPPPPPPPPP 314
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = -2
Query: 508 PPPPPPXGXXKKKPPPXPIXFXSXXPPPP 422
PP P P K PPP P+ PP
Sbjct: 731 PPTPAPTPAVKHHPPPPPVRSSISPSMPP 759
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.1 bits (57), Expect = 3.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -3
Query: 507 PPPPPPXGXXKKNPP 463
PPPPPP K PP
Sbjct: 1882 PPPPPPMALPKAGPP 1896
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 506 PPPPPPXXXXKKTPP 462
PPPPPP K PP
Sbjct: 1882 PPPPPPMALPKAGPP 1896
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 4.5
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -2
Query: 511 PPPPPPPXGXXKKKPPPXPI 452
PPPPPPP P P+
Sbjct: 370 PPPPPPPPELLNHSPKSRPL 389
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 4.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 512 PPPPPPPP 489
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 26.6 bits (56), Expect = 4.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 512 PPPPPPPP 489
PPPPPPPP
Sbjct: 946 PPPPPPPP 953
>SPCC63.08c |ppk36|atg1|serine/threonine protein kinase
Ppk36|Schizosaccharomyces pombe|chr 3|||Manual
Length = 830
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 118 RGVNSNSPPVNPGLGLEFFXPQVGP-NQGAFEEFSR 14
+ +N NSP N G+ F P+ P N AF SR
Sbjct: 459 QSINGNSPSPNEGVFQGSFSPESAPVNNHAFPHTSR 494
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -1
Query: 512 PPPPPPPPXXXXKKTPPXP 456
P PPPPPP P P
Sbjct: 3 PAPPPPPPAPAPAAAAPAP 21
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,768,360
Number of Sequences: 5004
Number of extensions: 24639
Number of successful extensions: 404
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 428468660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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