Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_P07
(870 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 88 1e-17
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 64 2e-10
AE014297-202|AAF52054.1| 562|Drosophila melanogaster CG1113-PA ... 34 0.29
AY069177-1|AAL39322.1| 640|Drosophila melanogaster GH22493p pro... 33 0.68
AE014296-2139|AAF49919.2| 640|Drosophila melanogaster CG10704-P... 33 0.68
AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA... 32 1.2
BT003546-1|AAO39550.1| 1214|Drosophila melanogaster RE04347p pro... 30 3.6
AF215703-1|AAF43004.1| 5322|Drosophila melanogaster KISMET-L lon... 30 3.6
AE014134-62|AAF51527.3| 5322|Drosophila melanogaster CG3696-PA, ... 30 3.6
BT001591-1|AAN71346.1| 760|Drosophila melanogaster RE27138p pro... 30 4.8
AY071846-1|AAL60055.1| 760|Drosophila melanogaster hepatocyte g... 30 4.8
AY051789-1|AAK93213.1| 760|Drosophila melanogaster LD30575p pro... 30 4.8
AE014134-454|AAF51222.1| 647|Drosophila melanogaster CG2903-PA,... 30 4.8
AE014134-453|AAN10412.2| 760|Drosophila melanogaster CG2903-PC,... 30 4.8
AE014134-452|AAF51221.2| 760|Drosophila melanogaster CG2903-PB,... 30 4.8
AY118927-1|AAM50787.1| 374|Drosophila melanogaster LD23870p pro... 29 6.3
AJ459409-1|CAD30680.1| 374|Drosophila melanogaster RNA-binding ... 29 6.3
AJ243904-1|CAB64937.1| 773|Drosophila melanogaster SF1 protein ... 29 6.3
AE014297-964|AAF54396.2| 374|Drosophila melanogaster CG16788-PA... 29 6.3
AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein ... 29 8.3
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 88.2 bits (209), Expect = 1e-17
Identities = 44/106 (41%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Frame = +2
Query: 110 LDSRWNFRAHFEKLGPRLMATAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCH 289
+D R +F+AH + TA +L+R++PNVGGP ARRL + V ++ LY AP+W
Sbjct: 724 IDRRLSFKAHARYASKKAAMTAAALARIMPNVGGPRLPARRLLVAVSKATLLYAAPIWSC 783
Query: 290 ALTRKN-VAALRRPQRAIAVRAIRGYRTVSFEAACLLAGAPPWDLE 424
T+K + + R R +A+R IRG+RT+S +AA L+G P DL+
Sbjct: 784 VSTKKTYLDSARAVSRTMALRLIRGFRTISDDAAHALSGITPIDLD 829
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 64.1 bits (149), Expect = 2e-10
Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Frame = +2
Query: 128 FRAHFEKLGPRLMATAGSLSRLLPNVGGPDQVARR-LYMGVVRSMALYGAPVWCHALTRK 304
F H L R+ G+L+R+L G ARR +Y G++ L+GAPVW T +
Sbjct: 747 FLTHIASLRQRMTGVVGALARVLRADWGFSPRARRTIYDGLMAPCVLFGAPVWYD--TAE 804
Query: 305 NVAALRRP---QRAIAVRAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYR 451
VAA RR QR I + + RTVS A +L GAPP DL A+ LA Y+
Sbjct: 805 QVAAQRRLASCQRLILLGCLSVCRTVSTVALQVLGGAPPLDLAAKLLAIKYK 856
Score = 29.1 bits (62), Expect = 8.3
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 308 VAALRRPQRAIAVRAIRGYRTV--SFEAACLLAGAPPWDLEAEALAADYRWRS 460
V AL R RA + R RT+ A C+L GAP W AE +AA R S
Sbjct: 762 VGALARVLRADWGFSPRARRTIYDGLMAPCVLFGAPVWYDTAEQVAAQRRLAS 814
>AE014297-202|AAF52054.1| 562|Drosophila melanogaster CG1113-PA
protein.
Length = 562
Score = 33.9 bits (74), Expect = 0.29
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 182 ESRPSPSVEGPTSQSERGSSTDYPVRGRGTEDRSPQPRRG 63
E P ++ PT+ S+R SS RGRG R +P+ G
Sbjct: 296 EEIPKIQIQSPTTSSKRSSSASSAARGRGRRGRVRKPKPG 335
>AY069177-1|AAL39322.1| 640|Drosophila melanogaster GH22493p
protein.
Length = 640
Score = 32.7 bits (71), Expect = 0.68
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = +1
Query: 151 GPSTDGDGRLSEPAASKRRGSRSGGAPPLHGGGAVDGTIRGSRMVPRPDPQERRGSAT 324
G S+ G GRLS PA S GSR +P +D S P+ RR T
Sbjct: 333 GDSSAGSGRLSLPALSPDSGSRDSRSPDADANRMIDIEGEDSESQDSDQPKFRRNRTT 390
>AE014296-2139|AAF49919.2| 640|Drosophila melanogaster CG10704-PA
protein.
Length = 640
Score = 32.7 bits (71), Expect = 0.68
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = +1
Query: 151 GPSTDGDGRLSEPAASKRRGSRSGGAPPLHGGGAVDGTIRGSRMVPRPDPQERRGSAT 324
G S+ G GRLS PA S GSR +P +D S P+ RR T
Sbjct: 333 GDSSAGSGRLSLPALSPDSGSRDSRSPDADANRMIDIEGEDSESQDSDQPKFRRNRTT 390
>AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA
protein.
Length = 950
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 556 ARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATP 452
A P +GPP+ PP +Y GAP PP ++ P
Sbjct: 242 APPSASYGPPKSAPPSQSY---GAPAPPSSKYGPP 273
>BT003546-1|AAO39550.1| 1214|Drosophila melanogaster RE04347p
protein.
Length = 1214
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -2
Query: 197 EAAGSESRPSPSVEGPTSQSERGSSTDYPVRGRGTEDRSPQPRRGRLRSRGGHPQ 33
+ G + RPS +G Q +G DY R G + Q +GR GG+ Q
Sbjct: 175 QEGGYQQRPSGQQQGGHQQGRQGQEGDYQQRPPGQQQGGHQ--QGRQGQEGGYQQ 227
>AF215703-1|AAF43004.1| 5322|Drosophila melanogaster KISMET-L long
isoform protein.
Length = 5322
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 151 GPSTDGDGRLSEPAASKRRGSRSGGAPPLHGGGAVDGTIRGS 276
G S +S PA GS SG P H A+DG+ + S
Sbjct: 2790 GKSNKESTGVSTPAPGSASGSNSGNTTPAHKSSALDGSDKDS 2831
>AE014134-62|AAF51527.3| 5322|Drosophila melanogaster CG3696-PA,
isoform A protein.
Length = 5322
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 151 GPSTDGDGRLSEPAASKRRGSRSGGAPPLHGGGAVDGTIRGS 276
G S +S PA GS SG P H A+DG+ + S
Sbjct: 2790 GKSNKESTGVSTPAPGSASGSNSGNTTPAHKSSALDGSDKDS 2831
>BT001591-1|AAN71346.1| 760|Drosophila melanogaster RE27138p
protein.
Length = 760
Score = 29.9 bits (64), Expect = 4.8
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Frame = -3
Query: 583 EAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAP-----FPPRAEVATPPVIGSERLRLQ 419
+ G ++Q A P G P++ PP FA P P + +A PP I + Q
Sbjct: 601 QPGGLMQQPAPP----GNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPFQPQPQQ 656
Query: 418 VPGWR----PGKQARRLEG 374
+PG + PG+Q +++ G
Sbjct: 657 IPGQQPQQIPGQQPQQIPG 675
>AY071846-1|AAL60055.1| 760|Drosophila melanogaster hepatocyte
growth factor-regulatedtyrosine kinase substrate
protein.
Length = 760
Score = 29.9 bits (64), Expect = 4.8
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Frame = -3
Query: 583 EAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAP-----FPPRAEVATPPVIGSERLRLQ 419
+ G ++Q A P G P++ PP FA P P + +A PP I + Q
Sbjct: 601 QPGGLMQQPAPP----GNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPFQPQPQQ 656
Query: 418 VPGWR----PGKQARRLEG 374
+PG + PG+Q +++ G
Sbjct: 657 IPGQQPQQIPGQQPQQIPG 675
>AY051789-1|AAK93213.1| 760|Drosophila melanogaster LD30575p
protein.
Length = 760
Score = 29.9 bits (64), Expect = 4.8
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Frame = -3
Query: 583 EAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAP-----FPPRAEVATPPVIGSERLRLQ 419
+ G ++Q A P G P++ PP FA P P + +A PP I + Q
Sbjct: 601 QPGGLMQQPAPP----GNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPFQPQPQQ 656
Query: 418 VPGWR----PGKQARRLEG 374
+PG + PG+Q +++ G
Sbjct: 657 IPGQQPQQIPGQQPQQIPG 675
>AE014134-454|AAF51222.1| 647|Drosophila melanogaster CG2903-PA,
isoform A protein.
Length = 647
Score = 29.9 bits (64), Expect = 4.8
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Frame = -3
Query: 583 EAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAP-----FPPRAEVATPPVIGSERLRLQ 419
+ G ++Q A P G P++ PP FA P P + +A PP I + Q
Sbjct: 488 QPGGLMQQPAPP----GNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPFQPQPQQ 543
Query: 418 VPGWR----PGKQARRLEG 374
+PG + PG+Q +++ G
Sbjct: 544 IPGQQPQQIPGQQPQQIPG 562
>AE014134-453|AAN10412.2| 760|Drosophila melanogaster CG2903-PC,
isoform C protein.
Length = 760
Score = 29.9 bits (64), Expect = 4.8
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Frame = -3
Query: 583 EAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAP-----FPPRAEVATPPVIGSERLRLQ 419
+ G ++Q A P G P++ PP FA P P + +A PP I + Q
Sbjct: 601 QPGGLMQQPAPP----GNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPFQPQPQQ 656
Query: 418 VPGWR----PGKQARRLEG 374
+PG + PG+Q +++ G
Sbjct: 657 IPGQQPQQIPGQQPQQIPG 675
>AE014134-452|AAF51221.2| 760|Drosophila melanogaster CG2903-PB,
isoform B protein.
Length = 760
Score = 29.9 bits (64), Expect = 4.8
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Frame = -3
Query: 583 EAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAP-----FPPRAEVATPPVIGSERLRLQ 419
+ G ++Q A P G P++ PP FA P P + +A PP I + Q
Sbjct: 601 QPGGLMQQPAPP----GNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPFQPQPQQ 656
Query: 418 VPGWR----PGKQARRLEG 374
+PG + PG+Q +++ G
Sbjct: 657 IPGQQPQQIPGQQPQQIPG 675
>AY118927-1|AAM50787.1| 374|Drosophila melanogaster LD23870p
protein.
Length = 374
Score = 29.5 bits (63), Expect = 6.3
Identities = 31/118 (26%), Positives = 41/118 (34%), Gaps = 3/118 (2%)
Frame = -2
Query: 380 RRRRCGILGSP*PRSHAADVAEPRRSCGSGRGTIREPRIVPSTXXXXXXXXXXXXXXXXR 201
RRR G G + + + R S R + PR R
Sbjct: 97 RRRGGGAAGKDKDKDKPSARSRSRSRTRSPRRVSKSPRPGSKARKEPERDRDRRSRSRDR 156
Query: 200 LEAAGSESRPSPSVEGPTSQSERGSSTDYPVR--GRGTEDRSPQP-RRGRLRSRGGHP 36
AGS R + + R +S R GRG+ +R+P P RR R RSR P
Sbjct: 157 ARRAGSNDRAAADSNNVKRERSRSASRSRSPRRRGRGSVERTPPPKRRERSRSRTRSP 214
>AJ459409-1|CAD30680.1| 374|Drosophila melanogaster RNA-binding
protein S1 protein.
Length = 374
Score = 29.5 bits (63), Expect = 6.3
Identities = 31/118 (26%), Positives = 41/118 (34%), Gaps = 3/118 (2%)
Frame = -2
Query: 380 RRRRCGILGSP*PRSHAADVAEPRRSCGSGRGTIREPRIVPSTXXXXXXXXXXXXXXXXR 201
RRR G G + + + R S R + PR R
Sbjct: 97 RRRGGGAAGKDKDKDKPSARSRSRSRTRSPRRVSKSPRPGSKARKEPERDRDRRSRSRDR 156
Query: 200 LEAAGSESRPSPSVEGPTSQSERGSSTDYPVR--GRGTEDRSPQP-RRGRLRSRGGHP 36
AGS R + + R +S R GRG+ +R+P P RR R RSR P
Sbjct: 157 ARRAGSNDRAAADSNNVKRERSRSASRSRSPRRRGRGSVERTPPPKRRERSRSRTRSP 214
>AJ243904-1|CAB64937.1| 773|Drosophila melanogaster SF1 protein
protein.
Length = 773
Score = 29.5 bits (63), Expect = 6.3
Identities = 22/68 (32%), Positives = 27/68 (39%)
Frame = -3
Query: 589 GSEAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVPG 410
G E A P Q PP + PP + A P PP E PP+ G+ + P
Sbjct: 679 GMEHAMAAYVPAPPGTQ-APPPMPPPLMPWMSAPQPPPPATEPLNPPIPGTLPPLIPPP- 736
Query: 409 WRPGKQAR 386
PG AR
Sbjct: 737 --PGTSAR 742
>AE014297-964|AAF54396.2| 374|Drosophila melanogaster CG16788-PA
protein.
Length = 374
Score = 29.5 bits (63), Expect = 6.3
Identities = 31/118 (26%), Positives = 41/118 (34%), Gaps = 3/118 (2%)
Frame = -2
Query: 380 RRRRCGILGSP*PRSHAADVAEPRRSCGSGRGTIREPRIVPSTXXXXXXXXXXXXXXXXR 201
RRR G G + + + R S R + PR R
Sbjct: 97 RRRGGGAAGKDKDKDKPSARSRSRSRTRSPRRVSKSPRPGSKARKEPERDRDRRSRSRDR 156
Query: 200 LEAAGSESRPSPSVEGPTSQSERGSSTDYPVR--GRGTEDRSPQP-RRGRLRSRGGHP 36
AGS R + + R +S R GRG+ +R+P P RR R RSR P
Sbjct: 157 ARRAGSNDRAAADSNNVKRERSRSASRSRSPRRRGRGSVERTPPPKRRERSRSRTRSP 214
>AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein
protein.
Length = 965
Score = 29.1 bits (62), Expect = 8.3
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = -3
Query: 586 SEAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVPGW 407
S+A + V + ++ R +GPPR P SN A + P PP + +++P W
Sbjct: 444 SKAAQSVYEESKAR--NGPPRQPLPCSNNASARSATAPPGIAPLPP----QNTDVELPPW 497
Query: 406 RPGKQARR 383
+ Q+RR
Sbjct: 498 KIVPQSRR 505
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,605,772
Number of Sequences: 53049
Number of extensions: 752875
Number of successful extensions: 3986
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3976
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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