Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_P07
(870 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical pr... 33 0.27
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 31 1.4
Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical pr... 30 1.9
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 30 1.9
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 30 1.9
AC017117-3|AAF16619.1| 339|Caenorhabditis elegans Hypothetical ... 29 3.3
AC006833-8|AAF60944.1| 360|Caenorhabditis elegans Hypothetical ... 29 3.3
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 29 5.7
U41031-2|AAA82619.2| 615|Caenorhabditis elegans Hypothetical pr... 29 5.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.7
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 29 5.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.7
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 28 7.5
U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical pr... 28 10.0
U80023-5|AAG24040.1| 315|Caenorhabditis elegans Serpentine rece... 28 10.0
L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembl... 28 10.0
AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein... 28 10.0
>Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical
protein T24D1.2 protein.
Length = 464
Score = 33.1 bits (72), Expect = 0.27
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = -2
Query: 191 AGSESRPSP----SVEGPTSQSERGSSTDYPVRGRGTEDRSPQPRRGRLRSRGGHPQAAL 24
A + R SP + S+ G S+ VRGRGT + RRGR +RGG +A +
Sbjct: 53 AAARERASPYSRSRIRSTAGTSDAGPSSSSSVRGRGTRG-TTSARRGRGSARGG--EATM 109
Query: 23 VPARENQ 3
R NQ
Sbjct: 110 NRTRANQ 116
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2
Query: 131 GSSTDYPVRGRGTEDRSPQPRRGRLRSRGG 42
G + RGRG D SP+ RG +SRGG
Sbjct: 152 GGRGGFTPRGRGGNDFSPRGGRGNFQSRGG 181
>Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = -2
Query: 194 AAGSESRP-SPSVEGPTSQSERGSSTDYPVRGRGTEDRSPQPRRGRLR--SRGG 42
++ S RP S GP S DY +G +DR RRG +R SRGG
Sbjct: 321 SSASNRRPVESSSRGPPPPPSSSSRRDYSHQGDRNDDRFENHRRGVIRGASRGG 374
>Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = -2
Query: 194 AAGSESRP-SPSVEGPTSQSERGSSTDYPVRGRGTEDRSPQPRRGRLR--SRGG 42
++ S RP S GP S DY +G +DR RRG +R SRGG
Sbjct: 321 SSASNRRPVESSSRGPPPPPSSSSRRDYSHQGDRNDDRFENHRRGVIRGASRGG 374
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = -2
Query: 185 SESRPSPSVEGPTSQSERGSSTDYP-----VRGRGTEDRSPQPRRGRLRSRGGHP 36
S SR S P +S R S + P ++ + RSP P + R R+R G P
Sbjct: 117 SRSRSSSRSRSPVRESRRRSESRSPSPKRDLKREASRSRSPLPAKDRSRTRSGSP 171
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = -3
Query: 589 GSEAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPP 449
G+ G RQA + H PP V PP+ A P P + VA PP
Sbjct: 259 GARHGSISRQATLTFVSHKPPPVNPPQP----AVPPKPAKISVADPP 301
>AC017117-3|AAF16619.1| 339|Caenorhabditis elegans Hypothetical
protein F43C11.9 protein.
Length = 339
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = -3
Query: 196 KQPAQRAGRRHQSRAQLLKVSAEVPPTIQFEAEVPKTGHPNPDADASDHEVGTHRRRSSR 17
+QP + S +QL SA PP+ + ++G P DAD+S EV +R+
Sbjct: 226 RQPESKPSNEASS-SQLEPTSASQPPSRVDQILKSRSGLPTKDADSSS-EVAPRKRKPKS 283
Query: 16 P 14
P
Sbjct: 284 P 284
>AC006833-8|AAF60944.1| 360|Caenorhabditis elegans Hypothetical
protein ZK616.8 protein.
Length = 360
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/92 (26%), Positives = 32/92 (34%), Gaps = 1/92 (1%)
Frame = -3
Query: 484 PFPPRAE-VATPPVIGSERLRLQVPGWRPGKQARRLEGDGAVSSDRPDRDRTLRTSQSRD 308
PF P + +TPPV R RLQ Q E D V P+ R + + S
Sbjct: 227 PFSPSKQPTSTPPVSEGNRKRLQTKVVERSNQIES-EMDSFVKKIEPNERRATQYNHSNS 285
Query: 307 VLAGQGVAPYGSXXXXXXXXXXXVEAARHLIG 212
+ P G+ + R LIG
Sbjct: 286 LSGSNEAVPPGNVKRSPQKATHPIRTTRSLIG 317
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -3
Query: 616 RENRADRLDGSEAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATP 452
R+ A+ +EA R R+ R R P PPR+N P PP + P
Sbjct: 63 RQQSAEERARAEADARRRERCRNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQP 117
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -3
Query: 616 RENRADRLDGSEAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATP 452
R+ A+ +EA R R+ R R P PPR+N P PP + P
Sbjct: 63 RQQSAEERARAEADARRRERCRNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQP 117
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -3
Query: 616 RENRADRLDGSEAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATP 452
R+ A+ +EA R R+ R R P PPR+N P PP + P
Sbjct: 63 RQQSAEERARAEADARRRERCRNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQP 117
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Frame = +1
Query: 154 PSTDGDGRLSEPAASKRRGSRSGGAPPLHGGGAVDGTIRGSRMVPRPD-PQERRGSATSA 330
P DG+ EP + G G PP GGA GS P P P + G+ +A
Sbjct: 206 PGKDGEKGKGEPGPAGPPGPPGPGGPPGDAGGA------GSDGAPGPQGPPGQDGTPGNA 259
Query: 331 ACDRGQGDPRIP 366
D G P P
Sbjct: 260 GPDGQPGSPGGP 271
>U41031-2|AAA82619.2| 615|Caenorhabditis elegans Hypothetical
protein C16B8.2 protein.
Length = 615
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = -3
Query: 160 SRAQLLKVSAEVPPTIQFEAEVP---KTGHPNPDADASDHE 47
S++ + K+ E+PPT+ P KT PNPD DAS+ E
Sbjct: 359 SQSHIKKIHLEMPPTLLPHRRKPKKMKTTTPNPD-DASEVE 398
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -3
Query: 550 PRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVPGWRP 401
P + GPP PP G P PP PP+ G PG P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -3
Query: 550 PRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVPGWRP 401
P + GPP PP G P PP PP+ G PG P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 245 VVRSMALYGAPVWCHALTRKNVAALRRPQRAIAVRAIRG 361
+++ ALYGAP W L+ N+ L R+ A+RA G
Sbjct: 689 LIKPTALYGAPAWTSLLSDTNLEKLEIAYRS-ALRACVG 726
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -3
Query: 550 PRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVPGWRP 401
P + GPP PP G P PP PP+ G PG P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +1
Query: 151 GPSTDGDGRLSEPAASKRRGSRSGGAPPLHGGGAVDGTIRGSR 279
G + G S+P R G R GG GGG DG GSR
Sbjct: 70 GQGSGGQSGGSDPYGQSRGGGR-GGFGGSRGGGGYDGGRGGSR 111
>U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical
protein T27A3.4 protein.
Length = 203
Score = 27.9 bits (59), Expect = 10.0
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -1
Query: 696 NTGRNNMAGKNLVSRKVRNPRSRPTQSARTG-RTASTVRRPADGSAKRRD-HASSTDRR 526
++ R ++ G+ SR + RSR R+G R++S R + S++RR H SS+ R
Sbjct: 113 SSSRGSVYGRTGRSRSSKRSRSRSRPRTRSGSRSSSRSRSGSRRSSRRRSRHRSSSKAR 171
>U80023-5|AAG24040.1| 315|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 31 protein.
Length = 315
Score = 27.9 bits (59), Expect = 10.0
Identities = 9/17 (52%), Positives = 16/17 (94%)
Frame = -1
Query: 669 KNLVSRKVRNPRSRPTQ 619
KN+++ KV+NP+S+PT+
Sbjct: 280 KNVITGKVKNPKSKPTK 296
>L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembly
abnormal protein 4 protein.
Length = 808
Score = 27.9 bits (59), Expect = 10.0
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -3
Query: 565 RQAARPRLQ--HGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRL 422
++ +RP L+ G R PR+N T AGAP A+ P I R L
Sbjct: 13 QKPSRPFLRKGQGTARFRMPRNNKTSAGAPPTSELSSASSPSINVPRFSL 62
>AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein
protein.
Length = 808
Score = 27.9 bits (59), Expect = 10.0
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -3
Query: 565 RQAARPRLQ--HGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRL 422
++ +RP L+ G R PR+N T AGAP A+ P I R L
Sbjct: 13 QKPSRPFLRKGQGTARFRMPRNNKTSAGAPPTSELSSASSPSINVPRFSL 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,284,812
Number of Sequences: 27780
Number of extensions: 331580
Number of successful extensions: 1351
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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