Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_P03
(865 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 67 2e-13
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 65 9e-13
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 63 3e-12
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 61 1e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 61 1e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 60 2e-11
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 59 5e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 58 8e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 56 3e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 56 3e-10
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 56 6e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 53 3e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 52 5e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 52 5e-09
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 46 6e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 46 6e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 45 8e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 44 2e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 41 2e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 37 2e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 35 0.001
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 34 0.001
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 30 0.032
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.29
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.8
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 67.3 bits (157), Expect = 2e-13
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 9/176 (5%)
Frame = +3
Query: 93 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESGST 251
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 252 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 425
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 426 VSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQFGSRMHNSDXMDFRD*QKNI 593
+ G V W + + + +P D QTC +FGS ++ +D + +N+
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQIDLKHINQNM 182
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 64.9 bits (151), Expect = 9e-13
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +3
Query: 117 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESGSTVRIQADLQMNW 284
N +++S ++D+LL YD PD V + + +R I E T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 285 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNXGSVSWI 455
+D+RL++ G+ + + R+W+PD N + T R+ G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 456 KRLDISTPISMQLDNWPNDMQTCTFQFGS 542
RL I M L+N+P D Q C QFGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 63.3 bits (147), Expect = 3e-12
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Frame = +3
Query: 111 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESGSTVRIQAD 269
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 270 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNXGS 443
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 444 VSWIKRLDISTPISMQLDNWPNDMQTCTFQFGSRMHNSDXMDFR 575
V W + + ++ +P D QTC +FGS ++ +D R
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLR 180
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 61.3 bits (142), Expect = 1e-11
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Frame = +3
Query: 138 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESGSTVRIQAD---LQMNWIDKRLS 302
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 303 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNXGSVSWIKRLDIST 476
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 477 PISMQLDNWPNDMQTCTFQFGSRMHNSDXMDFR 575
+ ++ +P D QTC +FGS ++ +D R
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVDLR 184
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 61.3 bits (142), Expect = 1e-11
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Frame = +3
Query: 138 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESGSTVRIQADLQMNWIDKR 296
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 297 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNXGSVSWIKR 461
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPP 151
Query: 462 LDISTPISMQLDNWPNDMQTCTFQFGSRMHNSDXMDFR 575
+ + ++ +P D Q+C +FGS +N +D +
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVDLK 189
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 60.5 bits (140), Expect = 2e-11
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 10/174 (5%)
Frame = +3
Query: 84 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESGS 248
+C +A + + D LL+ Y+R P ++ V + L L ++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 249 TVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL--- 416
+ ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIM 122
Query: 417 -RARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQFGSRMHNSDXMDFR 575
+A + + G V W + + ++ +P D QTC +FGS ++ +D R
Sbjct: 123 TKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVDLR 176
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 59.3 bits (137), Expect = 5e-11
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Frame = +3
Query: 189 KIVVNLTL-HLRHANIRESGSTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 362
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 363 PDVVLLNAAATTAGDYALRAR----VSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 530
PD+VL N A G+Y +R + + G V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 531 QFGSRMHNSD 560
+FGS N D
Sbjct: 168 KFGSWTFNGD 177
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.4 bits (135), Expect = 8e-11
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Frame = +3
Query: 138 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESGSTVRIQAD---LQMNWIDKRLS 302
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 303 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNXGSVSWIKRLD 467
W E+G L V S+ +WRPD+VL N A G+Y + +A V G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 468 ISTPISMQLDNWPNDMQTCTFQFGSRMHNSDXMDFR 575
+ S+ ++ +P D+QTC + GS ++ +D R
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVDLR 184
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 58.0 bits (134), Expect = 1e-10
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 228 NIRESGSTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQFGSRMHNSDXMD 569
G Y V++ GS ++ + M + +P D Q C +FGS ++ + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 228 NIRESGSTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQFGSRMHNSDXMD 569
G Y V++ GS ++ + M + +P D Q C +FGS ++ + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 57.2 bits (132), Expect = 2e-10
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Frame = +3
Query: 111 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESGSTVRIQADLQ 275
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 276 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNXGSV 446
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 447 SWIKRLDISTPISMQLDN--WPNDMQTCTFQFGSRMHNSD 560
+ TP+ + D+ WP D+ CT S H S+
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSHGSN 185
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 57.2 bits (132), Expect = 2e-10
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 228 NIRESGSTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 402 GDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQFGSRMHNSDXMD 569
G Y V++ GS ++ + + + +P D Q C +FGS ++ + +D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 57.2 bits (132), Expect = 2e-10
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 228 NIRESGSTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 402 GDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQFGSRMHNSDXMD 569
G Y V++ GS ++ + + + +P D Q C +FGS ++ + +D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 56.8 bits (131), Expect = 2e-10
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 228 NIRESGSTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQFGSRMHNSDXMD 569
G Y V++ GS ++ + + + +P D Q C +FGS ++ + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 56.8 bits (131), Expect = 2e-10
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 228 NIRESGSTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQFGSRMHNSDXMD 569
G Y V++ GS ++ + + + +P D Q C +FGS ++ + +D
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 56.4 bits (130), Expect = 3e-10
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 228 NIRESGSTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQFGSRMHNSDXMD 569
G Y V++ GS ++ + + + +P D Q C +FGS ++ + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 56.4 bits (130), Expect = 3e-10
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 228 NIRESGSTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQFGSRMHNSDXMD 569
G Y V++ GS ++ + + + +P D Q C +FGS ++ + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 55.6 bits (128), Expect = 6e-10
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 8/160 (5%)
Frame = +3
Query: 114 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESGSTVRIQADLQMN 281
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 282 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNXGSVS 449
W D LSW ++ G + V S+ +W PD+ + N+ T G V + GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 450 WIKRLDISTPISMQLDNWPNDMQTCTFQFGSRMHNSDXMD 569
+ + + +WP D C FGS +H+ + ++
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVN 198
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 53.2 bits (122), Expect = 3e-09
Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 7/169 (4%)
Frame = +3
Query: 90 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESGSTV 254
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 255 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 428
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 429 SNXGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQFGSRMHNSDXMDFR 575
N G+ ++ + + + +P D Q C +FGS ++ +D +
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQ 179
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 52.4 bits (120), Expect = 5e-09
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Frame = +3
Query: 126 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESGSTVRIQADLQMNWID 290
++++++++LL Y+ + P + VV + +R + E + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 291 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNXGSVSWIKR 461
RLS+ S + ER+WRPD N + + R+S G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 462 LDISTPISMQLDNWPNDMQTCTFQFGS 542
L I M+L N+P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 52.4 bits (120), Expect = 5e-09
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Frame = +3
Query: 192 IVVNLTLHLRHANIRESGSTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 368
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 369 VVLLNAAATTAGDYALRAR--VSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQFGS 542
+L N A + VS+ G V W+ + + ++ +P D Q C ++ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 45.6 bits (103), Expect = 6e-07
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 12/157 (7%)
Frame = +3
Query: 138 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESGSTVRIQADLQMNWIDKR 296
++D++L YD P D +V + L +R A I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 297 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNXGSVSWIKR 461
L +N G T L + R+W PD+ N + + R+ GSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 462 LDISTPISMQLDNWPNDMQTCTFQFGSRMHNSDXMDF 572
+ ++ M L +P D Q C+ + S +D + F
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVF 190
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 45.6 bits (103), Expect = 6e-07
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Frame = +3
Query: 117 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESGSTVRIQADLQMNW 284
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 285 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNX 437
D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 438 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFQFGS 542
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 45.2 bits (102), Expect = 8e-07
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Frame = +3
Query: 117 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESGSTVRIQADLQMNW 284
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 285 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNX 437
D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 438 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFQFGS 542
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 43.6 bits (98), Expect = 2e-06
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 12/157 (7%)
Frame = +3
Query: 138 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESGSTVRIQADLQMNWIDKR 296
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 297 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNXGSVSWIKR 461
L +N G T L + R+W PD+ N + + R+ GSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 462 LDISTPISMQLDNWPNDMQTCTFQFGSRMHNSDXMDF 572
+ ++ M L +P D Q C+ + S +D + F
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVF 190
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 40.7 bits (91), Expect = 2e-05
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = +3
Query: 231 IRESGSTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 410
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 411 ALR---ARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQFGS 542
R R+S GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.1 bits (82), Expect = 2e-04
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Frame = +3
Query: 282 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 434
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 435 XGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQFGS 542
GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 34.7 bits (76), Expect = 0.001
Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 5/120 (4%)
Frame = +3
Query: 228 NIRESGSTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 401
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 402 GDYALRAR---VSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQFGSRMHNSDXMDF 572
+ ++ + + ++ ++ +L + +M+ +++P+D Q C+ S H + + F
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVF 162
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 34.3 bits (75), Expect = 0.001
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +3
Query: 348 ERLWRPDVVLLNAAATTAGDYALRAR---VSNXGSVSWIKRLDISTPISMQLDNWPNDMQ 518
+ +WRPD NA + T + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 519 TCTFQFGSRMHNSDXMDFR 575
C Q S H +D M F+
Sbjct: 176 ECKLQMESLSHTTDEMIFQ 194
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 29.9 bits (64), Expect = 0.032
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +3
Query: 354 LWRPDVVLLN--AAATTAGDYA-LRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQTC 524
+W P V + N ++A T + + + G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 525 TFQFGSRMHN 554
F S HN
Sbjct: 157 PLIFESWTHN 166
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 26.6 bits (56), Expect = 0.29
Identities = 28/139 (20%), Positives = 55/139 (39%), Gaps = 11/139 (7%)
Frame = +3
Query: 192 IVVNLTLHLRHAN-IRESGSTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 353
++V+ + + N I R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 354 LWRPDVVLLNAAATTAGDYALRARVSN-----XGSVSWIKRLDISTPISMQLDNWPNDMQ 518
LW+PD LNA + AL + S+ +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 519 TCTFQFGSRMHNSDXMDFR 575
C S ++ + R
Sbjct: 129 ICPIYIESFSYHKQKLRLR 147
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.8
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 335 PSAAAPLPCVPTQS 294
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,379
Number of Sequences: 438
Number of extensions: 4517
Number of successful extensions: 87
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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