Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_O09
(876 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.22
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.28
SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein Did4... 31 0.28
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.66
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 1.1
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 1.1
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 1.1
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 2.7
SPCC1020.10 |oca2||serine/threonine protein kinase Oca2 |Schizos... 27 2.7
SPAC56E4.02c |alg13||N-acetylglucosaminyldiphosphodolichol N-ace... 27 3.5
SPAC1F7.09c |||allantoicase |Schizosaccharomyces pombe|chr 1|||M... 27 4.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.6
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 6.1
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 26 6.1
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 6.1
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.1 bits (67), Expect = 0.22
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +3
Query: 699 GGXXFPXGGSPXXGPPXXXFXGXXXXPXXGXGFRGXXXXGXGXGGF--SPGXXXGGXGG 869
GG GGS P F G G G G G GGF PG GG GG
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Score = 27.1 bits (57), Expect = 3.5
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +2
Query: 707 PXSPGGLPXXXXXXGGLXRPXXXTPGXXGFSGGXXXGXGGGGFF--AXXXXGGXXGGF 874
P PGG GG G GF GG GG G F GG GGF
Sbjct: 201 PPGPGGF----GGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGF 254
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.7 bits (66), Expect = 0.28
Identities = 21/73 (28%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Frame = -3
Query: 859 PPXXXPGEKPPXPXPXXXXPRKPXPXXGXXXXPXKXXXGGPXXGEPPXGXXXP-PAXXCX 683
PP P PP P P P P P G P K G P P P P+
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP-KPAAGVPPVPPPSEAPPVPKPSVGVP 1208
Query: 682 XAXFPEXXPDXXT 644
P P T
Sbjct: 1209 PVPPPSTAPPVPT 1221
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = -3
Query: 871 PPPXPPXXXPGEKPPXPXPXXXXPRKPXPXXGXXXXPXKXXXGGPXXGEP 722
P PP P PP P P P P P P G P +P
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAP--PVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 26.6 bits (56), Expect = 4.6
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -3
Query: 859 PPXXXPGEKPPXPXPXXXXPRKPXPXXGXXXXPXKXXXGGPXXGEPPXGXXXPP 698
PP P PP P P P P P G P K P P G P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAP-SGAPPVP-KPSVAAPPVPAPSSGIPPVP 1182
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 868 PPXPPXXXPGEKPPXPXPXXXXPRKPXP 785
PP PP P PP P P P P P
Sbjct: 1208 PPVPP---PSTAPPVPTPSAGLPPVPVP 1232
>SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein
Did4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 30.7 bits (66), Expect = 0.28
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 207 VRVHRADTGRSSNELDRQTTELERRGMGL-QHLAG 308
+R H+ GR+ ELDR+ T+L++R L Q + G
Sbjct: 18 LRAHQRSLGRAERELDRERTKLDQRERALIQEIKG 52
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 0.66
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 871 PPPXPPXXXPGEKPPXPXP 815
PPP PP P +PP P P
Sbjct: 11 PPPPPPGFEPPSQPPPPPP 29
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 871 PPPXPPXXXPGEKPPXPXPXXXXPRK 794
PPP P P + PP P P RK
Sbjct: 12 PPPPPGFEPPSQPPPPPPPGYVKKRK 37
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 870 PPXXPPXKXXAKNPPPPXPXXXPPENPXXP 781
PP PP PPPP P PP P P
Sbjct: 5 PPGNPP-------PPPPPPGFEPPSQPPPP 27
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.7 bits (61), Expect = 1.1
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = -1
Query: 870 PPXXPPXKXXAKNPPPPXPXXXPPENPXXPGVXXXGRXXPPXXXXXQGSPPGEXGXRXPA 691
PP PP A + P P P P GR PP S P P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNP----PAPPP 393
Query: 690 XVPGR 676
+PGR
Sbjct: 394 AIPGR 398
Score = 26.2 bits (55), Expect = 6.1
Identities = 19/78 (24%), Positives = 22/78 (28%), Gaps = 1/78 (1%)
Frame = -1
Query: 870 PPXXPPXKXXAKN-PPPPXPXXXPPENPXXPGVXXXGRXXPPXXXXXQGSPPGEXGXRXP 694
PP PP + PPP NP P GR P S P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 693 AXVPGRXFRKXXRTXPPS 640
+P + PPS
Sbjct: 421 PSLPPSAPPSLPPSAPPS 438
Score = 25.8 bits (54), Expect = 8.1
Identities = 16/63 (25%), Positives = 19/63 (30%)
Frame = -1
Query: 870 PPXXPPXKXXAKNPPPPXPXXXPPENPXXPGVXXXGRXXPPXXXXXQGSPPGEXGXRXPA 691
PP PP + PP P P P P + PP +PP P
Sbjct: 420 PPSLPPSAPPSL--PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Query: 690 XVP 682
P
Sbjct: 478 PAP 480
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.7 bits (61), Expect = 1.1
Identities = 22/68 (32%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Frame = +2
Query: 677 RPGTXAGXRXPXSPGGLPXXXXXXGGLXRPXXXTPGXXGFSGGXXXGXGGG--GFFAXXX 850
+P T G + P P GG + G GF G G GGG G F
Sbjct: 118 KPKT-VGPKKPKGARNGPAGRGGRGGFRGGRGGSRG--GFGGNSRGGFGGGSRGGFGGGS 174
Query: 851 XGGXXGGF 874
GG GGF
Sbjct: 175 RGGSRGGF 182
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.7 bits (61), Expect = 1.1
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Frame = -1
Query: 876 ENPPXXPPX---KXXAKNP---PPPXPXXX-PPENPXXPGVXXXGRXXPP 748
++PP PP A P PPP P PP P PGV G PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 871 PPPXPPXXXPGEKPPXPXP 815
PPP PP G PP P P
Sbjct: 762 PPPPPPPGVAGAGPPPPPP 780
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 870 PPXXPPXKXXAKNPPPPXP 814
PP PP A PPPP P
Sbjct: 763 PPPPPPGVAGAGPPPPPPP 781
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = -3
Query: 871 PPPXPPXXXPGEKPPXPXPXXXXPRKPXP 785
PPP P P PP P P P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = -3
Query: 868 PPXPPXXXPGEKPPXPXPXXXXPRKPXPXXGXXXXPXKXXXGGPXXGEPPXGXXXPP 698
PP P PGE P P P P + P P + P EP PP
Sbjct: 286 PPPPMHHEPGEHMP-PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPCC1020.10 |oca2||serine/threonine protein kinase Oca2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 385 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHN 522
RA +++ + +KR DI + DNW ND+ C + G +H+
Sbjct: 588 RAVIAHMLELDPVKRYDIHRVFA---DNWINDISMCHMENGKVIHS 630
>SPAC56E4.02c |alg13||N-acetylglucosaminyldiphosphodolichol
N-acetylglucosaminyltransferase Alg13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 162
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 131 YVARSESIMRDSDVAFSHSAALAIAQVRRNGNK 33
Y ES + D+ + SH+ A +I Q R+G +
Sbjct: 63 YAPEIESYIHDASIVISHAGAGSILQTLRSGKR 95
>SPAC1F7.09c |||allantoicase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 342
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 285 FPCVPTQSFVDPIHLKICQYPHGGL 211
F +P Q+F H+++C YP GG+
Sbjct: 150 FKEIPQQNFT---HVRLCMYPDGGI 171
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -2
Query: 872 TPPXXPXXXPXRKTPXPPPPXXXPPKTP 789
+P P P + P P PP PP P
Sbjct: 220 SPEIPPTYTPKQADPLPAPPPPPPPTLP 247
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Frame = -3
Query: 871 PPPXPPXXX-PGEKPPXPXPXXXXPRKPXP 785
PP PP P PP P P P P P
Sbjct: 1717 PPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = -3
Query: 844 PGEKPPXPXPXXXXPRKPXPXXGXXXXPXKXXXGGP 737
P K P P P PRKP P P P
Sbjct: 44 PVSKKPLPPPTRRLPRKPLPFRSTSLQPPSSQPPAP 79
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = -3
Query: 871 PPPXPPXXXPGEKPPXPXPXXXXPRKPXP 785
PPP PP P PP P P P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,261,551
Number of Sequences: 5004
Number of extensions: 63935
Number of successful extensions: 301
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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