Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_O08
         (1095 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL355338-1|CAH70366.2|  663|Homo sapiens Zic family member 5 (od...    32   4.2  
AF378304-1|AAK55418.1|  639|Homo sapiens zinc family member 5 pr...    32   4.2  

>AL355338-1|CAH70366.2|  663|Homo sapiens Zic family member 5
            (odd-paired homolog, Drosophila) protein.
          Length = 663

 Score = 31.9 bits (69), Expect = 4.2
 Identities = 18/61 (29%), Positives = 21/61 (34%)
 Frame = -1

Query: 1071 PPXPSSPXXXXRXAPSXRLLNRGXXIXSXXXAGXGXAPXXQXPXXPPXXPTPXPXDXXPP 892
            P  P +P    R A    + + G           G  P    P  PP  PTP P    PP
Sbjct: 112  PAHPEAPAAAARAAAL--VAHPGAGSYPCGGGSSGAQPSAPPPPAPPLPPTPSPPPPPPP 169

Query: 891  P 889
            P
Sbjct: 170  P 170


>AF378304-1|AAK55418.1|  639|Homo sapiens zinc family member 5 protein
            protein.
          Length = 639

 Score = 31.9 bits (69), Expect = 4.2
 Identities = 18/61 (29%), Positives = 21/61 (34%)
 Frame = -1

Query: 1071 PPXPSSPXXXXRXAPSXRLLNRGXXIXSXXXAGXGXAPXXQXPXXPPXXPTPXPXDXXPP 892
            P  P +P    R A    + + G           G  P    P  PP  PTP P    PP
Sbjct: 88   PAHPEAPAAAARAAAL--VAHPGAGSYPCGGGSSGAQPSAPPPPAPPLPPTPSPPPPPPP 145

Query: 891  P 889
            P
Sbjct: 146  P 146


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,512,327
Number of Sequences: 237096
Number of extensions: 657516
Number of successful extensions: 4662
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3959
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 15092347998
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)