Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_N23
(882 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 48 9e-08
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 47 3e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 43 3e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 43 3e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 43 3e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 43 3e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 43 4e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 42 6e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 42 8e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 41 1e-05
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 41 2e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 41 2e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 40 2e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 39 5e-05
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 36 4e-04
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 4e-04
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 36 5e-04
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 35 9e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 35 0.001
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 35 0.001
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 35 0.001
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 32 0.006
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 32 0.006
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 32 0.006
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.17
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 1.2
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 1.2
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 1.2
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 1.2
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 4.9
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 6.5
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 8.6
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 48.4 bits (110), Expect = 9e-08
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPN 500
V S+ +W PD+ + N+ T G V ++GSVS + + + +WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 501 DMQTCTFXFGSRMHXSDEMDFVIDKRIYSM 590
D C FGS +H +E++ +DK+ + M
Sbjct: 179 DTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 46.8 bits (106), Expect = 3e-07
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Frame = +3
Query: 339 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPXSMQLDNWPNDM 506
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 507 QTCTFXFGSRMHXSDEMDFVI--DKRIYSM---FESXAWDV 614
QTC FGS D++ + +K + ++S WD+
Sbjct: 163 QTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDI 203
Score = 25.8 bits (54), Expect = 0.53
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 179 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNA---GGVGLQHL 325
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 45.6 bits (103), Expect = 6e-07
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPNDM 506
V S+ +WRPD+VL N A A +A + + G V W + + ++ +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 507 QTCTFXFGSRMHXSDEMD 560
QTC FGS + ++D
Sbjct: 165 QTCVLKFGSWTYDGFKVD 182
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 309 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 217
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 45.6 bits (103), Expect = 6e-07
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPNDM 506
V S+ +WRPD+VL N A A +A ++ G V W + + ++ +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 507 QTCTFXFGSRMHXSDEMD 560
QTC FGS + ++D
Sbjct: 161 QTCVMKFGSWTYDGFQVD 178
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 43.6 bits (98), Expect = 2e-06
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPNDM 506
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 507 QTCTFXFGSRMHXSDEMDFVI 569
Q C FGS + +++D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 218 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 313
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 43.6 bits (98), Expect = 2e-06
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPNDM 506
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 507 QTCTFXFGSRMHXSDEMDFVI 569
Q C FGS + +++D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 218 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 313
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPNDM 506
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 507 QTCTFXFGSRMHXSDEMDFVI 569
Q C FGS + +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 218 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 313
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 43.2 bits (97), Expect = 3e-06
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 339 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPXSMQLDNWPNDMQ 509
ER+WRPD N + + R+S +G + + RL I M+L N+P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 510 TCTFXFGS 533
+C GS
Sbjct: 175 SCPLILGS 182
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 43.2 bits (97), Expect = 3e-06
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPXSMQLDNWP 497
V S+ +WRPD+VL N A G+Y + +A V +G V W + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 498 NDMQTCTFXFGSRMHXSDEMD 560
D+QTC GS + ++D
Sbjct: 162 YDVQTCVLKLGSWTYDGFKVD 182
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 309 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 217
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 43.2 bits (97), Expect = 3e-06
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +3
Query: 306 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPXSM 479
E+G T L V SE +W PD+VL N A G + +A + G V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 480 QLDNWPNDMQTCTFXFGSRMHXSDEMD 560
+ +P D QTC FGS + ++D
Sbjct: 148 DVRYFPFDQQTCFMKFGSWTYDGIQID 174
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 43.2 bits (97), Expect = 3e-06
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPNDM 506
+ RLW+PDV++ N+A G Y V NNG+ ++ + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 507 QTCTFXFGSRMHXSDEMDFVIDKR----IYSMFESXAWDV 614
Q C FGS + ++D + I S + WD+
Sbjct: 160 QRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 199
Score = 23.8 bits (49), Expect = 2.1
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Frame = +2
Query: 62 RFLLTCAIASAAE--CENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-N 220
R+ L AIA AA + +++ LL TY+ P +V++ L L +
Sbjct: 3 RWTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIID 62
Query: 221 IRESESTVRIQADLQMNWIDKRLSWNAGGVG 313
+ E + L++ W D + WN G
Sbjct: 63 VDEKNQLLITNLWLKLEWNDVNMRWNVSDYG 93
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 42.7 bits (96), Expect = 4e-06
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 312 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPXSM 479
G V SE +W PD+VL N A G+Y + +A + G VSW + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 480 QLDNWPNDMQTCTFXFGSRMHXSDEMD 560
++ +P D Q+C FGS + ++D
Sbjct: 161 NVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 42.3 bits (95), Expect = 6e-06
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPNDM 506
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 507 QTCTFXFGSRMHXSDEMDFVI 569
Q C FGS + +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 218 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 313
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 41.9 bits (94), Expect = 8e-06
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPNDM 506
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 507 QTCTFXFGSRMHXSDEMDFVI 569
Q C FGS + +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 218 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 313
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 41.1 bits (92), Expect = 1e-05
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPNDM 506
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 507 QTCTFXFGSRMHXSDEMDFVI 569
Q C FGS + +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 218 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 313
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 40.7 bits (91), Expect = 2e-05
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPNDM 506
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 507 QTCTFXFGSRMHXSDEMDFVI 569
Q C FGS + +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 218 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 313
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 40.7 bits (91), Expect = 2e-05
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPNDM 506
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 507 QTCTFXFGSRMHXSDEMDFVI 569
Q C FGS + +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 218 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 313
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 40.3 bits (90), Expect = 2e-05
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +3
Query: 312 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPXSM 479
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 480 QLDNWPNDMQTCTFXFGS 533
++ +P D QTC FGS
Sbjct: 148 DVEYFPFDEQTCFMKFGS 165
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 39.1 bits (87), Expect = 5e-05
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +3
Query: 342 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPNDMQT 512
R+W+PD N + T R+ +G V + RL I M L+N+P D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 513 CTFXFGS 533
C FGS
Sbjct: 144 CPLQFGS 150
Score = 34.3 bits (75), Expect = 0.002
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 107 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 274
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 275 IDKRLSWNAG 304
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 36.3 bits (80), Expect = 4e-04
Identities = 16/77 (20%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 345 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPXSMQLDNWPNDMQTC 515
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 516 TFXFGSRMHXSDEMDFV 566
+ S H + ++ F+
Sbjct: 147 SMMIESLSHTTQDLVFI 163
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 36.3 bits (80), Expect = 4e-04
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 101 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 265
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 266 MNWIDKRLSWNA 301
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
Score = 30.7 bits (66), Expect = 0.019
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSWIKRLDISTPXSMQLDNWPN 500
V S +W PD+V+ ++ + D ++ V N+G++ + + WP
Sbjct: 110 VKSYEIWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPY 168
Query: 501 DMQTCTFXFGSRMHXSDEM 557
D+ CT S H S+E+
Sbjct: 169 DILNCTIHIASWSHGSNEI 187
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 35.9 bits (79), Expect = 5e-04
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPXSMQLDNWPND 503
V R+WRPD +L N A + VS+ G V W+ + + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 504 MQTCTFXFGS 533
Q C + S
Sbjct: 142 EQRCVLKWAS 151
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 35.1 bits (77), Expect = 9e-04
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +3
Query: 336 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPXSMQLDNWPNDM 506
+E++W PD N + D R R+S +GSV++ R + M L +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 507 QTCT 518
Q CT
Sbjct: 173 QNCT 176
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 34.7 bits (76), Expect = 0.001
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +3
Query: 339 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPXSMQLDNWPNDMQ 509
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 510 TCTFXFGSRMHXSDEMDFVID 572
C S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.7 bits (76), Expect = 0.001
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +3
Query: 327 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPXSMQLDNWP 497
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 498 NDMQTCTFXFGSRMHXSDEMDFV 566
D Q C+ S +D++ F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
Score = 27.9 bits (59), Expect = 0.13
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +2
Query: 128 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 286
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 287 LSWNAGGVGLQHL 325
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.7 bits (76), Expect = 0.001
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +3
Query: 327 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPXSMQLDNWP 497
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 498 NDMQTCTFXFGSRMHXSDEMDFV 566
D Q C+ S +D++ F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
Score = 30.7 bits (66), Expect = 0.019
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +2
Query: 128 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 286
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 287 LSWNAGGVGLQHL 325
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.3 bits (70), Expect = 0.006
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +3
Query: 312 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 464
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 465 TPXSMQLDNWPNDMQTC 515
M L +P D Q C
Sbjct: 136 ASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.3 bits (70), Expect = 0.006
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +3
Query: 312 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 464
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 465 TPXSMQLDNWPNDMQTC 515
M L +P D Q C
Sbjct: 136 ASCPMNLQYFPMDRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 32.3 bits (70), Expect = 0.006
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +3
Query: 312 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 464
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 18 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 74
Query: 465 TPXSMQLDNWPNDMQTC 515
M L +P D Q C
Sbjct: 75 ASCPMNLQYFPMDRQLC 91
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.5 bits (58), Expect = 0.17
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +3
Query: 339 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPXSMQLDNWPND 503
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 504 MQTC 515
+Q C
Sbjct: 127 IQIC 130
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 414 RVSNNGSVSWIKRLDISTPXSMQLDNWPNDMQTCTFXFGSRMHXSDEMDFV 566
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 414 RVSNNGSVSWIKRLDISTPXSMQLDNWPNDMQTCTFXFGSRMHXSDEMDFV 566
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 414 RVSNNGSVSWIKRLDISTPXSMQLDNWPNDMQTCTFXFGSRMHXSDEMDFV 566
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 414 RVSNNGSVSWIKRLDISTPXSMQLDNWPNDMQTCTFXFGSRMHXSDEMDFV 566
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.6 bits (46), Expect = 4.9
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +2
Query: 179 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVGLQHLAGVL----GTL 346
+ ++N L + + + ++ + D + N + + S AGGV + AG++ GTL
Sbjct: 239 RAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMCQPVGTL 298
Query: 347 V 349
+
Sbjct: 299 I 299
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +1
Query: 700 RPRHTPWRAXPGSRGXSXXXLRGCL 774
RP+ TP P G S GCL
Sbjct: 254 RPKMTPQSLLPSQTGLSPYLRFGCL 278
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 124 GQ*CCVFAFCRTSYSTSEEKPVTR 53
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,955
Number of Sequences: 438
Number of extensions: 4897
Number of successful extensions: 81
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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