Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_N01
         (873 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr...    43   6e-04
AE014297-4148|AAF56725.2| 1497|Drosophila melanogaster CG5586-PB...    29   6.3  

>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
           protein.
          Length = 1053

 Score = 42.7 bits (96), Expect = 6e-04
 Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +1

Query: 307 NTSSGTPQERECSIRKSCNNVS--VTSMEDMSHEEIVTSYVLAHVAQFDCRRHHMAFTNG 480
           N  +  P   EC    +   V+   T   +M  EEI  + VLAH+A  D R   + FT+ 
Sbjct: 111 NLLNSRPTAAECYAVYASRLVTQLTTKWRNMEIEEIAVTTVLAHMANIDSRLQRVLFTSN 170

Query: 481 NTTRNKLLQEIKA 519
             TR+KL  E+KA
Sbjct: 171 VRTRSKLQAELKA 183


>AE014297-4148|AAF56725.2| 1497|Drosophila melanogaster CG5586-PB
            protein.
          Length = 1497

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 268  STAKKKKKHYADQNTSSGTPQERECSIRKSCNNVSV 375
            STAK+++  Y D+ T S TP     S++++   VS+
Sbjct: 974  STAKRREMLYIDEETQSPTPTPSSSSMKRTPTVVSI 1009


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,707,778
Number of Sequences: 53049
Number of extensions: 689176
Number of successful extensions: 1452
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4229643912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)