Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_M15
(894 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 32 0.54
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 32 0.71
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 32 0.71
12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232 31 0.94
11_01_0066 - 536281-537196,537397-537452 31 1.2
08_01_0059 - 394001-394708 31 1.6
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 30 2.2
04_04_0087 + 22718930-22719068,22719165-22719484,22721406-22722500 30 2.9
01_07_0286 - 42519269-42519754,42524657-42525253,42525277-42526311 30 2.9
08_02_1291 + 25930056-25930067,25930289-25930334,25930434-259305... 29 3.8
04_03_0904 + 20717005-20718087 29 3.8
10_07_0107 - 12936839-12937030,12937305-12937386,12937476-129375... 29 5.0
09_02_0426 + 9176147-9176297,9177118-9177624,9177985-9178715 29 6.6
04_04_0079 + 22586803-22586923,22592541-22592860,22592991-225936... 29 6.6
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 28 8.7
07_03_0809 - 21669632-21669637,21669871-21670131,21670573-216707... 28 8.7
03_01_0515 - 3864796-3865425 28 8.7
02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198... 28 8.7
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 28 8.7
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 32.3 bits (70), Expect = 0.54
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -1
Query: 315 HQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQM-QGQVDYDFGVGG 151
H P AAA P VP++ P L + GG GL S S + G + D G+GG
Sbjct: 7 HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGG 61
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.9 bits (69), Expect = 0.71
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 668 PPPXTRXLGXXTXX*TPPGQXXPPPDXGTPRXTXXPP 558
PPP R G TPPG PP G P PP
Sbjct: 1185 PPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPP 1221
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 31.9 bits (69), Expect = 0.71
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -1
Query: 690 PPAXDGGXXPPHPVXXXXNXXXNPPRSXXPPPRXG 586
PP GG PP P N PPRS PPP G
Sbjct: 296 PPPPVGGTQPPPPPPPLAN---GPPRSIPPPPMTG 327
>12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232
Length = 1035
Score = 31.5 bits (68), Expect = 0.94
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 621 PPRSXXPPPRXGXPPXYSXAPXXKSHFVT 535
PPR PP R PP Y+ P ++ F+T
Sbjct: 250 PPRPPPPPVRVASPPLYTLVPPAETGFLT 278
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = -2
Query: 713 ARPGKKYGPXPXTXXPPPXTRXLGXXTXX*TPPGQXXPPPDXGTPRXTXXPPXRNPISSX 534
ARP + P P PPP PP PPP TP T P PI +
Sbjct: 204 ARPPR---PLPPASPPPPSIATPPPSPASPPPPSTATPPPPSPTPTTTRASPTPPPIPTA 260
Query: 533 LCIP 522
P
Sbjct: 261 TVRP 264
>08_01_0059 - 394001-394708
Length = 235
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = -2
Query: 689 PXPXTXXPPPXTRXLGXXTXX*TPPGQXXPPPDXGTPRXTXXPPXRNPIS 540
P P PPP PP PP TPR PP +P++
Sbjct: 4 PPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLA 53
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 213 VRVHRADTGRSSNELDRQTTELERRGMGLQHLAGVLGTL 329
V+ H + R S EL+RQ ELER+G L+ G L +
Sbjct: 89 VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127
>04_04_0087 + 22718930-22719068,22719165-22719484,22721406-22722500
Length = 517
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 380 TTLSAPVYLI-TAPVSWDKGAWTLAXQISMXVDN 478
T +APVYL TAP W +GA+T Q+ + + N
Sbjct: 151 TNQAAPVYLAETAPAKW-RGAFTTGFQLFLGIGN 183
>01_07_0286 - 42519269-42519754,42524657-42525253,42525277-42526311
Length = 705
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 800 PXRGGXXGGGVXLXLXXGXXXSPPXGGGG 886
P R G GGG + + G SP GGGG
Sbjct: 394 PLRYGRAGGGYTMFVKTGGAASPALGGGG 422
>08_02_1291 +
25930056-25930067,25930289-25930334,25930434-25930546,
25930645-25930930,25931357-25931421,25931642-25931693,
25931774-25931883,25932611-25932641,25932853-25933004,
25934622-25934840
Length = 361
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 228 HGGLGLTNVSMSQMQGQVDYDFGVGGRLPI 139
+GG L ++Q G Y +G GGRLP+
Sbjct: 100 YGGPALPRYGIAQFPGGSGYPYGYGGRLPM 129
>04_03_0904 + 20717005-20718087
Length = 360
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = -1
Query: 660 PHPVXXXXNXXXNPPRSXXPPPRXGXPPXYSXAP 559
P P NPP + P P+ PP Y AP
Sbjct: 213 PTPPSYKPQPKPNPPPTYKPQPKPNPPPTYKPAP 246
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = -2
Query: 695 YGPXPXTXXPPPXTRXLGXXTXX*TP-PGQXXPPPDXGTPRXTXXPPXRNP 546
Y P P PPP + T TP Q P P TP+ T PP P
Sbjct: 290 YTPTPKPN-PPPTYKPQPKPTPTPTPYKPQPKPTPSPYTPKPTPTPPTYTP 339
>10_07_0107 -
12936839-12937030,12937305-12937386,12937476-12937586,
12937667-12937918,12938004-12940237,12940328-12940525
Length = 1022
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = -2
Query: 689 PXPXTXXPPPXTRXLGXXTXX*TPPGQXXPPPDXG--TPRXTXXPPXRNPIS 540
P P + PP R L +PP Q PPP P T P +P S
Sbjct: 568 PAPPSPPEPPSPRHLPSPPPLRSPPRQPTPPPSPSQQPPLPTPQPVQASPTS 619
>09_02_0426 + 9176147-9176297,9177118-9177624,9177985-9178715
Length = 462
Score = 28.7 bits (61), Expect = 6.6
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +3
Query: 192 ETC*HS*VRVHRADTGRSSNELDRQTTELERRGMGLQHLAGVLGTLVEA*RGTAKRGCNH 371
E C + V V + D RS L T++ ++ G H A L T +E G R C H
Sbjct: 57 EKCKNVEVNVQQEDQQRSIPLLLYLTSQSDKNGSTPLHFAASLKTSIE---GFTSRLCEH 113
Query: 372 RRGLRSP 392
R +SP
Sbjct: 114 FRPKQSP 120
>04_04_0079 +
22586803-22586923,22592541-22592860,22592991-22593623,
22593717-22594166
Length = 507
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 380 TTLSAPVYLI-TAPVSWDKGAWTLAXQISMXV 472
TT +AP+YL TAP W +GA+T A I + +
Sbjct: 145 TTQAAPLYLAETAPARW-RGAFTAAYHIFLVI 175
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 620 PPGQXXPPPDXGTPRXTXXPPXR 552
PPG PPP G P PP R
Sbjct: 620 PPGAPPPPPPPGKPGGPPPPPPR 642
>07_03_0809 -
21669632-21669637,21669871-21670131,21670573-21670752,
21671458-21672819
Length = 602
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 100 SLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMN 255
+L +D L+ YD+ PPDS+ V HA + +R+L + +N
Sbjct: 160 NLWTQVDILILRYDK--PPDSRFVQEALAAHAHATEGSETTAIRLLEVISLN 209
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = -1
Query: 690 PPAXDGGXXPPHPVXXXXNXXXNPPRSXXPPPRXGXPPXYSXAPXXKS 547
PPA PP P + PP PPP PP +P S
Sbjct: 63 PPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPS 110
>02_01_0296 +
1978565-1981197,1981216-1981639,1982280-1982771,
1982950-1983087
Length = 1228
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 397 GRGERSPRRWLQPRLAVPRQASTSVPRTP 311
GRG RS R L+P LA+ A + +P P
Sbjct: 442 GRGPRSTLRILRPGLAISEMARSMLPAEP 470
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -1
Query: 342 VRPPQAFRGHQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQMQGQV 175
++PP H + AP P +P+ S P++ + PH S +QM Q+
Sbjct: 551 LQPPAHMLPHAQGSRAPLPQLPSMSGPPPVNPPLPPMPHPMAMQVQGSSNQMMPQM 606
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,239,494
Number of Sequences: 37544
Number of extensions: 610913
Number of successful extensions: 2070
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1967
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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