Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_M14
(910 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 51 2e-08
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 45 8e-07
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 45 1e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 45 1e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 45 1e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 44 1e-06
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 44 3e-06
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 44 3e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 43 4e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 42 8e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 42 8e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 42 8e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 38 1e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 32 0.006
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 32 0.008
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 31 0.019
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.9
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 50.8 bits (116), Expect = 2e-08
Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Frame = +1
Query: 64 IASAAECENATSLSLMIDSLLATYDRESPPDSE----IVVNLTLHLRHA---NIRESEST 222
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 223 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYALRXRV 399
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 400 SN-XGSVSW 423
+ G V W
Sbjct: 127 LHYTGKVLW 135
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 45.2 bits (102), Expect = 8e-07
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 9/123 (7%)
Frame = +1
Query: 82 CENATSLSLMIDSLLATYDRESPPDSEIVVNLTLHLR-------HANIRESESTVRILAD 240
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 241 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRXRVSNXGS 414
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A + ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 415 VSW 423
V W
Sbjct: 137 VEW 139
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.8 bits (101), Expect = 1e-06
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +1
Query: 142 ESPPDSEIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 318
ES P E+ +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 76 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 133
Query: 319 ERLWRPDVVLLNAA-ATTAGDYALRXRVSNXGS 414
+LW+PD+++ N+A G Y V++ GS
Sbjct: 134 NKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.8 bits (101), Expect = 1e-06
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +1
Query: 142 ESPPDSEIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 318
ES P E+ +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 76 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 133
Query: 319 ERLWRPDVVLLNAA-ATTAGDYALRXRVSNXGS 414
+LW+PD+++ N+A G Y V++ GS
Sbjct: 134 NKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 44.8 bits (101), Expect = 1e-06
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Frame = +1
Query: 55 TCAIASAAECENATSLSLMIDSLLATYDRESPP----DSEIVVNLTLHLRH---ANIRES 213
+C +A + + D LL+ Y+R P + V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 214 ESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 360
T + ++ W D +L WN ++G T V SE +W PD+VL N A
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 113
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +1
Query: 142 ESPPDSEIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 318
ES P E+ +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 8 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65
Query: 319 ERLWRPDVVLLNAA-ATTAGDYALRXRVSNXGS 414
+LW+PD+++ N+A G Y V++ GS
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +1
Query: 142 ESPPDSEIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 318
ES P E+ +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 8 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65
Query: 319 ERLWRPDVVLLNAA-ATTAGDYALRXRVSNXGS 414
+LW+PD+++ N+A G Y V++ GS
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +1
Query: 142 ESPPDSEIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 318
ES P E+ +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 8 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65
Query: 319 ERLWRPDVVLLNAA-ATTAGDYALRXRVSNXGS 414
+LW+PD+++ N+A G Y V++ GS
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +1
Query: 142 ESPPDSEIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 318
ES P E+ +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 8 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65
Query: 319 ERLWRPDVVLLNAA-ATTAGDYALRXRVSNXGS 414
+LW+PD+++ N+A G Y V++ GS
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +1
Query: 142 ESPPDSEIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 318
ES P E+ +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 8 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65
Query: 319 ERLWRPDVVLLNAA-ATTAGDYALRXRVSNXGS 414
+LW+PD+++ N+A G Y V++ GS
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +1
Query: 142 ESPPDSEIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 318
ES P E+ +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 8 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65
Query: 319 ERLWRPDVVLLNAA-ATTAGDYALRXRVSNXGS 414
+LW+PD+++ N+A G Y V++ GS
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHNGS 98
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 44.4 bits (100), Expect = 1e-06
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Frame = +1
Query: 109 MIDSLLATYDRESPPDSEIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 273
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 274 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RXRVSNXGSVSW 423
WN E+G L V SE +W PD+VL N A G+Y + + + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 43.6 bits (98), Expect = 3e-06
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +1
Query: 82 CENATSLSLMIDS---LLATYDRESPPDSEIV--VNLTLHLRHANIRESESTVRILADLQ 246
C++ TS S + L YDR+ P+ + ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 247 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 348
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 43.6 bits (98), Expect = 3e-06
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Frame = +1
Query: 109 MIDSLLATYDRESPP--DSEIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 273
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 274 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRXRVSNXGSVSW 423
W E+G L V S+ +WRPD+VL NA A + + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 42.7 bits (96), Expect = 4e-06
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +1
Query: 88 NATSLSLMIDSLLATYDRESPPD---SEIVVNLTLHLRHAN-IRESESTVRILADLQMNW 255
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 256 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 354
+D+RL++ G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 41.9 bits (94), Expect = 8e-06
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Frame = +1
Query: 109 MIDSLLATYDRESPP--DSEIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 273
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 274 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 360
W E+G L V S+ +WRPD+VL N A
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 41.9 bits (94), Expect = 8e-06
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Frame = +1
Query: 163 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 339
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 340 VVLLNAAATTAGDYALRXR--VSNXGSVSW 423
+L N A + VS+ G V W
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVW 121
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 41.9 bits (94), Expect = 8e-06
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Frame = +1
Query: 61 AIASAAECENATSLSLMIDSLLATYD-RESPPDSE---IVVNLTLHLRHA-NIRESESTV 225
A+A++ + +++ LL TY+ E P +E +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 226 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRXRV 399
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 400 SNXGS 414
N G+
Sbjct: 131 KNNGT 135
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 38.3 bits (85), Expect = 1e-04
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 199 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAG 375
N+ E ++ L+ W D +L W+ ++G + +++W+PD+VL N A G
Sbjct: 65 NVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DG 121
Query: 376 DYALRXR 396
+Y +R +
Sbjct: 122 NYEVRYK 128
Score = 24.6 bits (51), Expect = 1.3
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 479 PTXMQTCTFKFGSXXHTXDQXGI 547
P QTC KFGS DQ +
Sbjct: 159 PFDQQTCIMKFGSWTFNGDQVSL 181
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 32.3 bits (70), Expect = 0.006
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Frame = +1
Query: 97 SLSLMIDSLLATYDRESPPD----SEIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 261
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 262 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 354
RLS+ S + ER+WRPD N
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 31.9 bits (69), Expect = 0.008
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 13/124 (10%)
Frame = +1
Query: 88 NATSLSLMIDSLLATYDRESPPD---SEIVVNLTLH-LRHANIRESESTVRILADLQMNW 255
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 256 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRXRVSNX 408
D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 409 GSVS 420
GS++
Sbjct: 124 GSIT 127
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 30.7 bits (66), Expect = 0.019
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Frame = +1
Query: 88 NATSLSLMIDSLLATYDRESPPD---SEIVVNLTLH-LRHANIRESESTVRILADLQMNW 255
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 256 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRXRVSNX 408
D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 409 GSVS 420
GS++
Sbjct: 124 GSIT 127
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 306 PSAAAPFPCVPTQS 265
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,813
Number of Sequences: 438
Number of extensions: 4022
Number of successful extensions: 62
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -