Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_M13
(914 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 52 6e-07
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 51 1e-06
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 51 1e-06
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 51 1e-06
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 50 2e-06
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 50 2e-06
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 50 2e-06
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 49 5e-06
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 49 5e-06
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 49 5e-06
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 49 5e-06
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 48 7e-06
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 48 7e-06
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 48 9e-06
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 48 1e-05
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 47 2e-05
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 47 2e-05
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 47 2e-05
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 47 2e-05
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 47 2e-05
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 47 2e-05
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 47 2e-05
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 47 2e-05
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 46 3e-05
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 46 3e-05
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 46 4e-05
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 45 7e-05
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 45 7e-05
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 44 1e-04
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 44 1e-04
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 44 2e-04
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 43 4e-04
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 42 5e-04
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 42 6e-04
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 42 6e-04
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 42 8e-04
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 42 8e-04
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 42 8e-04
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 41 0.001
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 41 0.001
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 41 0.001
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 41 0.001
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 41 0.001
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 41 0.001
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 40 0.002
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 40 0.002
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 40 0.002
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 40 0.002
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 40 0.003
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 40 0.003
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 40 0.003
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 40 0.003
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 39 0.004
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 39 0.004
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 39 0.004
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 39 0.006
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 39 0.006
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 39 0.006
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 38 0.008
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 38 0.010
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 38 0.010
Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical pr... 37 0.017
U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic acety... 37 0.017
U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic acety... 37 0.017
AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine... 37 0.017
AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholin... 37 0.017
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 37 0.023
AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ... 37 0.023
Z83120-8|CAE46678.2| 511|Caenorhabditis elegans Hypothetical pr... 36 0.031
Z83120-7|CAB51466.2| 514|Caenorhabditis elegans Hypothetical pr... 36 0.031
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 36 0.031
AY523515-1|AAR98637.1| 553|Caenorhabditis elegans acetylcholine... 36 0.031
Z74044-1|CAA98550.1| 548|Caenorhabditis elegans Hypothetical pr... 36 0.040
Z74039-11|CAA98508.1| 548|Caenorhabditis elegans Hypothetical p... 36 0.040
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 36 0.040
AF077307-1|AAC98095.1| 548|Caenorhabditis elegans acetyl cholin... 36 0.040
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 36 0.053
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 35 0.071
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 35 0.071
U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine r... 35 0.071
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 35 0.071
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 35 0.071
Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical p... 34 0.12
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 34 0.12
AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic ace... 34 0.12
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 33 0.22
AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ... 33 0.22
AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical ... 32 0.50
AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine ... 32 0.50
AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine ... 32 0.50
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 32 0.66
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.87
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 31 0.87
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 31 0.87
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 31 0.87
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81085-2|CAB03114.2| 618|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical ... 31 1.1
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 31 1.5
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 31 1.5
Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 30 2.0
U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 30 2.0
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 30 2.0
Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical pr... 30 2.7
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 30 2.7
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 30 2.7
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 3.5
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 3.5
Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical p... 29 4.6
Z81118-1|CAB03329.1| 478|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical pr... 29 4.6
U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protei... 29 4.6
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 4.6
AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A ... 29 4.6
AJ000537-1|CAA04170.1| 478|Caenorhabditis elegans GluClalpha2B ... 29 4.6
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 4.6
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.1
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 29 6.1
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 29 6.1
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 8.1
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 8.1
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 8.1
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 8.1
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 28 8.1
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 28 8.1
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 28 8.1
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 8.1
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 52.0 bits (119), Expect = 6e-07
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Frame = +2
Query: 131 LSLMIDSLLATYDRDSPP----DSKIVVNLTLHL-RHANIRESESTVRIQADLQMNWIDK 295
+S ++++LL Y++ P + V +L R ++ E + L+M W DK
Sbjct: 29 VSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDEVNQVLTTSLWLEMQWYDK 88
Query: 296 RLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAG-DYALRARVSNNGSGLLE*SAW 469
+L+WN +WG ++ + S+++W PD+VL N A A++ ++G + + +
Sbjct: 89 KLTWNPTDWGGVEYIHIPSDQIWIPDIVLYNNADGEPHITITSLAKIDHHGRVVWQPPS- 147
Query: 470 TLALQFLCS*TIG--PXDMQTCXXKFG 544
+ C I P D QTC KFG
Sbjct: 148 --IYKSFCPINIKYFPYDWQTCEMKFG 172
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 51.2 bits (117), Expect = 1e-06
Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 316
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 317 EWG--CSTWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGS 445
+G TW + +++W PD+++ N A A+R AR+ NG+
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGT 175
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 51.2 bits (117), Expect = 1e-06
Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 316
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 317 EWG--CSTWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGS 445
+G TW + +++W PD+++ N A A+R AR+ NG+
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGT 175
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 51.2 bits (117), Expect = 1e-06
Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 316
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 317 EWG--CSTWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGS 445
+G TW + +++W PD+++ N A A+R AR+ NG+
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGT 175
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 50.0 bits (114), Expect = 2e-06
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 9/144 (6%)
Frame = +2
Query: 140 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 305 WNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAG-DYALRARVSNNGSGLLE*SAWTLA 478
W+ + G + V E +W PD+VL N A + + +A + G E A
Sbjct: 90 WDPVNYGGVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTWEPPA---I 146
Query: 479 LQFLCS*TIG--PXDMQTCXXKFG 544
+ +C + P D Q C KFG
Sbjct: 147 FKSMCQIDVRWFPFDEQQCHLKFG 170
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 50.0 bits (114), Expect = 2e-06
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 9/144 (6%)
Frame = +2
Query: 140 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 305 WNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAG-DYALRARVSNNGSGLLE*SAWTLA 478
W+ + G + V E +W PD+VL N A + + +A + G E A
Sbjct: 90 WDPVNYGGVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTWEPPA---I 146
Query: 479 LQFLCS*TIG--PXDMQTCXXKFG 544
+ +C + P D Q C KFG
Sbjct: 147 FKSMCQIDVRWFPFDEQQCHLKFG 170
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 50.0 bits (114), Expect = 2e-06
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 9/144 (6%)
Frame = +2
Query: 140 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 305 WNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAG-DYALRARVSNNGSGLLE*SAWTLA 478
W+ + G + V E +W PD+VL N A + + +A + G E A
Sbjct: 90 WDPVNYGGVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTWEPPA---I 146
Query: 479 LQFLCS*TIG--PXDMQTCXXKFG 544
+ +C + P D Q C KFG
Sbjct: 147 FKSMCQIDVRWFPFDEQQCHLKFG 170
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 316
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 317 EWG--CSTWLVSSERLWRPDVVLLN 385
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 48.8 bits (111), Expect = 5e-06
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 9/144 (6%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP--DSKIVVNLTLHL---RHANIRESESTVRIQADLQMNWIDKRLS 304
++ L YD P D + VN+ L L + ++ E + + Q W D +L
Sbjct: 28 LLKDLREGYDPVERPVADHRKPVNVKLRLILQQLVDVDERNQVITLVVWNQYTWNDYKLR 87
Query: 305 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGLLE*SAWTLA 478
W+ E+G T L + LW+PD++L N+A + + VS+NG L A
Sbjct: 88 WSPEEYGNITTLQIPHGTLWKPDILLFNSANEHFDASFPVHMVVSSNGDVLF---APPGI 144
Query: 479 LQFLCS*TIG--PXDMQTCXXKFG 544
+ F CS ++ P D Q C KFG
Sbjct: 145 VSFSCSLSMTWFPYDQQVCYLKFG 168
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 316
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 317 EWG--CSTWLVSSERLWRPDVVLLN 385
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 316
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 317 EWG--CSTWLVSSERLWRPDVVLLN 385
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 48.4 bits (110), Expect = 7e-06
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 8/153 (5%)
Frame = +2
Query: 110 ECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NIRESESTVRIQADL 274
E + T + D L+ YD P + +++N++++ + +E T+ ++
Sbjct: 21 EVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVLTLDPAEETINFSSEF 80
Query: 275 QMNWIDKRLSWNAGEWGCSTWLVSSER-LWRPDVVLLNAAATTAGDYALRARVSNNGSGL 451
+ W D+ L WN ++ TWL E LW PD + + T A VS G
Sbjct: 81 ILQWKDEFLFWNKSDYNI-TWLKLKESFLWTPDTTVSTSIDTNYLIDASERYVSVKHDGT 139
Query: 452 LE*SAWTLALQFLCS*TIG--PXDMQTCXXKFG 544
+ S + + LC + P D QTC K G
Sbjct: 140 VRQSIYAVFTN-LCDMNVDKFPYDQQTCMIKMG 171
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 48.4 bits (110), Expect = 7e-06
Identities = 31/148 (20%), Positives = 60/148 (40%), Gaps = 1/148 (0%)
Frame = +2
Query: 101 SAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQM 280
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 281 NWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATT-AGDYALRARVSNNGSGLLE 457
+W D +SW+ +WG S ++W P++V +N +T+ G + +N +
Sbjct: 114 SWNDTMVSWDKEQWGLSWLNFYWIQIWTPNIVQINGGSTSNPGQVTSKVLAANYTGQIYL 173
Query: 458 *SAWTLALQFLCS*TIGPXDMQTCXXKF 541
S ++ F P DMQ KF
Sbjct: 174 WSDFSFTTPFRFQYEDYPNDMQRVCYKF 201
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 48.0 bits (109), Expect = 9e-06
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Frame = +2
Query: 113 CENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQ 277
C+ + + + + LL Y+ P + V + L L+ ++ E V + A L
Sbjct: 20 CDGSVAETKLFTDLLKGYNPLERPVQNSSQPLEVKIKLFLQQILDVDEKNQIVSVNAWLS 79
Query: 278 MNWIDKRLSWNAGEWGCSTWLV---SSERLWRPDVVLLNAAATTAGDYALRARVSNNGSG 448
W D +L W ++G + SS+ +W+PDV+L N+AA D ++ + +G
Sbjct: 80 YTWFDHKLQWEPKKYGGIQDIRFPGSSDHIWKPDVLLYNSAAEDF-DSTFKSNLLTYHTG 138
Query: 449 LLE*SAWTL--ALQFLCS*TIG--PXDMQTCXXKFG 544
+ W L+F+C + P D Q C KFG
Sbjct: 139 TV---VWIPPGVLKFVCQLDVTWFPFDDQVCEMKFG 171
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRI 262
T +A +E +S S + LL +++ SPPD ++ ++ + L H I E +++
Sbjct: 56 TVGVAEFSEQYQGSS-SRLTRHLLEKHNKCSPPDGRVDISHNIELVHIIGINELNQNMQV 114
Query: 263 QADLQMNWIDKRLSWNAGEW-GCS-TWLVSSERLWRPDVVLLN 385
+ W D LSW E+ G TWL +W PD+++ N
Sbjct: 115 LVYIVQQWTDASLSWKVEEFRGIKHTWL-PEHSIWIPDIIVFN 156
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 47.2 bits (107), Expect = 2e-05
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 12/147 (8%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+ + L+A Y++ P S+ +VV L L ++ E + LQ +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 305 WNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSGLLE*SAW 469
W+ E+ G V S+ +W PDVVL N A G+Y + +A+++ NG+ +E A
Sbjct: 90 WDPVEYGGVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGT--VE-WAP 143
Query: 470 TLALQFLCS*TIG--PXDMQTCXXKFG 544
+ +C + P D Q C KFG
Sbjct: 144 PAIYKSMCQIDVEFFPFDRQQCEMKFG 170
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 47.2 bits (107), Expect = 2e-05
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAG 406
++ E + + ++ L +W+D RLSWN E+G T + E LW PD++L N A +
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEMLWLPDIILYNNAHGSPW 103
Query: 407 -DYALRARVSNNGSGLLE*SAWTLALQFLCS*TIG--PXDMQTCXXKFG 544
+ VS G + + C+ I P D+Q C KFG
Sbjct: 104 VSETTQVHVSFEGRVTWQPP---VVYDAFCNIDIEWYPYDLQICELKFG 149
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 47.2 bits (107), Expect = 2e-05
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 12/147 (8%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+ + L+A Y++ P S+ +VV L L ++ E + LQ +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 305 WNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSGLLE*SAW 469
W+ E+ G V S+ +W PDVVL N A G+Y + +A+++ NG+ +E A
Sbjct: 90 WDPVEYGGVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGT--VE-WAP 143
Query: 470 TLALQFLCS*TIG--PXDMQTCXXKFG 544
+ +C + P D Q C KFG
Sbjct: 144 PAIYKSMCQIDVEFFPFDRQQCEMKFG 170
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 46.8 bits (106), Expect = 2e-05
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Frame = +2
Query: 194 IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL---VSSERLW 361
+VV++ ++L+ ++ E + + A ++ W D +L W+ E+G + ++ +W
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYGGIKDIRIPGNANAIW 112
Query: 362 RPDVVLLNAA-ATTAGDYALRARVSNNGSGLLE*SAWTLALQFLCS*TIGPXDMQTCXXK 538
+PDV+L N+A Y + VS G +L+ L L T P D Q C K
Sbjct: 113 KPDVLLYNSADENFDSTYPVNYVVSYTGD-VLQVPPGILKLSCKIDITYFPFDDQICHLK 171
Query: 539 FG 544
FG
Sbjct: 172 FG 173
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 46.8 bits (106), Expect = 2e-05
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 10/163 (6%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESES 250
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYALRAR 427
V + A L W D L W+ E+G T + + ++W+PDV+L N+ T D +
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNF-DSTYQTN 126
Query: 428 VSNNGSGLLE*SAWTLALQFLCS*TIG----PXDMQTCXXKFG 544
+ +GL+ W F S I P D Q C KFG
Sbjct: 127 MIVYSTGLVH---WVPPGIFKISCKIDIQWFPFDEQKCFFKFG 166
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 46.8 bits (106), Expect = 2e-05
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 10/163 (6%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESES 250
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYALRAR 427
V + A L W D L W+ E+G T + + ++W+PDV+L N+ T D +
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNF-DSTYQTN 126
Query: 428 VSNNGSGLLE*SAWTLALQFLCS*TIG----PXDMQTCXXKFG 544
+ +GL+ W F S I P D Q C KFG
Sbjct: 127 MIVYSTGLVH---WVPPGIFKISCKIDIQWFPFDEQKCFFKFG 166
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 46.8 bits (106), Expect = 2e-05
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 10/163 (6%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESES 250
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYALRAR 427
V + A L W D L W+ E+G T + + ++W+PDV+L N+ T D +
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNF-DSTYQTN 126
Query: 428 VSNNGSGLLE*SAWTLALQFLCS*TIG----PXDMQTCXXKFG 544
+ +GL+ W F S I P D Q C KFG
Sbjct: 127 MIVYSTGLVH---WVPPGIFKISCKIDIQWFPFDEQKCFFKFG 166
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 46.8 bits (106), Expect = 2e-05
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 10/163 (6%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESES 250
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYALRAR 427
V + A L W D L W+ E+G T + + ++W+PDV+L N+ T D +
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNF-DSTYQTN 126
Query: 428 VSNNGSGLLE*SAWTLALQFLCS*TIG----PXDMQTCXXKFG 544
+ +GL+ W F S I P D Q C KFG
Sbjct: 127 MIVYSTGLVH---WVPPGIFKISCKIDIQWFPFDEQKCFFKFG 166
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 391
N+ E ++ L M W D +L+WN E+G S V S+R+W PD+VL N A
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNA 153
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 391
N+ E ++ L M W D +L+WN E+G S V S+R+W PD+VL N A
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNA 153
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 46.0 bits (104), Expect = 4e-05
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Frame = +2
Query: 218 LRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAA 394
+R ++ E + L+M W D RL W+ G WG L V +++W PD++L N A
Sbjct: 59 IRIIDVDEVNQVLTTNLWLEMQWFDYRLMWDPGRWGKIRKLHVPVDQIWIPDILLYN-NA 117
Query: 395 TTAGDYALRARVSNNGSGLLE*SAWTLALQFLCS*TIG--PXDMQTCXXKFG 544
+ + +GL+ ++ F CS I P D QTC KFG
Sbjct: 118 DGEPHITIMSDAIVYYNGLVVWKPPSIYKSF-CSIDIEYFPYDTQTCWMKFG 168
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 45.2 bits (102), Expect = 7e-05
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 239 ESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 391
E + ++ L +NW+D RLSWN W + R+W+PD++L+N A
Sbjct: 154 ERNQALTTRSWLNINWMDPRLSWNESLWSEIKAIYIPHARIWKPDIILVNNA 205
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 45.2 bits (102), Expect = 7e-05
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 10/145 (6%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP--DSK--IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+I+ L++ Y R+ P DS +VV+L + L+ N+ E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 305 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYALRARVSNNGSGLLE*SAWTLAL 481
W + T L + LW PD++L N + + D + + + N +G + W
Sbjct: 85 WEPTAYENVTDLRHPPDALWTPDILLYN-SVDSEFDSSYKVNLVNYHTGNIN---WMPPG 140
Query: 482 QFLCS*TIG----PXDMQTCXXKFG 544
F S + P D Q C KFG
Sbjct: 141 IFKVSCKLDIYWFPFDEQVCYFKFG 165
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 44.4 bits (100), Expect = 1e-04
Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Frame = +2
Query: 110 ECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLH-LRHANIRESESTVRIQADL 274
E + T + D L+ YD P + +N++++ + + +E T+ +
Sbjct: 21 EIDGITVSEQLKDVLMEGYDSSIRPVINERDTLFINISINSMSFLTLDPAEETINFSGEF 80
Query: 275 QMNWIDKRLSWNAGEWGCSTWLVSSER-LWRPDVVLLNAAATTAGDYALRARVSNNGSGL 451
+ W D+ L WN ++ TWL E LW PD + + T VS G
Sbjct: 81 ILQWKDEFLFWNKSDYNI-TWLKLKESFLWTPDTTVSTSIDTNYLIETSERYVSVKYDGT 139
Query: 452 LE*SAWTLALQFLCS*TIG--PXDMQTCXXKFG 544
+ + + + LC I P D QTC K G
Sbjct: 140 VRQNIYAVFTN-LCDMNINEFPYDQQTCMIKMG 171
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 164 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL- 340
YD ++P + L +L+ ++E + + + ++ W D RLSWNA W +T +
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTTMIY 122
Query: 341 VSSERLWRPDV 373
+ +++W P +
Sbjct: 123 MKQDKVWSPTI 133
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 44.0 bits (99), Expect = 2e-04
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +2
Query: 200 VNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVV 376
VN+ L + H + E E T + + WID+ + W+A + + +S+ LW+P +
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKLTISAHSLWQPALA 113
Query: 377 LLNAAATTAGDYALRARVSNNGSGLLE*SAWTLALQFLC--S*TIGPXDMQTC 529
L N+A + + A + S S T + C T P D Q+C
Sbjct: 114 LYNSARGNSWHLYMGAMPATVYSTGKVWSTGTFSFYVTCQFDFTNWPFDQQSC 166
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 42.7 bits (96), Expect = 4e-04
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Frame = +2
Query: 194 IVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 367
++V + L L+ ++ E V + A L+ +W+D L W ++G T L +LW P
Sbjct: 51 VMVKMGLVLQQIVDVDEKNQVVDVNAWLKFSWVDYSLKWKPEDYGGVTDLRFRKGQLWTP 110
Query: 368 DVVLLNAAATTAGD-YALRARVSNNG-SGLLE*SAWTLALQFLCS*TIGPXDMQTCXXKF 541
DV++ N+A YA V NG + + L+ + P D+Q C KF
Sbjct: 111 DVLMYNSADPQFDSRYASNLLVYPNGLVNWMPPGLYRLSCKIQV--VWFPFDVQECFLKF 168
Query: 542 G 544
G
Sbjct: 169 G 169
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 42.3 bits (95), Expect = 5e-04
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 200 VNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVV 376
V + L++ H + E E T + L +W D+ L W ST ++S +LW+P +
Sbjct: 54 VAVYLNIAHVEKVDEHEQTALVHGHLMASWTDEYLKWERKATNISTLSIASSKLWQPALQ 113
Query: 377 LLNAA 391
L N+A
Sbjct: 114 LYNSA 118
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 41.9 bits (94), Expect = 6e-04
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Frame = +2
Query: 233 IRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTA-- 403
+ E + V I L++ WID+ L+W+ ++G S V + ++W+PDV++ N A
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNNANMNVEE 128
Query: 404 GDYALRARVSNNGSGLLE*SAWTLALQFLCS*TIG--PXDMQTCXXKF 541
+ A V N G +L S T C+ + P D Q C F
Sbjct: 129 NEMETNAIVDNTGRVMLFRSMIT---DISCNLNLQQFPFDQQICFVTF 173
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 41.9 bits (94), Expect = 6e-04
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Frame = +2
Query: 233 IRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTA-- 403
+ E + V I L++ WID+ L+W+ ++G S V + ++W+PDV++ N A
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNNANMNVEE 128
Query: 404 GDYALRARVSNNGSGLLE*SAWTLALQFLCS*TIG--PXDMQTCXXKF 541
+ A V N G +L S T C+ + P D Q C F
Sbjct: 129 NEMETNAIVDNTGRVMLFRSMIT---DISCNLNLQQFPFDQQICFVTF 173
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 41.5 bits (93), Expect = 8e-04
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 164 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLV 343
YD D+P + L +L+ + E E V + +L W D RLSWNA ++ T +
Sbjct: 65 YDPDAPQRYNYTLFL-YNLKLIQVNEPEEQVSVVLELMEYWYDPRLSWNASDYKNVTAIF 123
Query: 344 S-SERLWRP 367
+ E++W P
Sbjct: 124 TRQEKIWSP 132
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +2
Query: 197 VVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDV 373
+V++ H+ H +I + E T+ + + M W D+ L W+ ++ + V ++W+P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 374 VLLNAAA--TTAGDYALRARV 430
+ N+A+ +A D++ A V
Sbjct: 134 KVSNSASGLGSAFDFSTSAHV 154
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +2
Query: 197 VVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDV 373
+V++ H+ H +I + E T+ + + M W D+ L W+ ++ + V ++W+P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 374 VLLNAAA--TTAGDYALRARV 430
+ N+A+ +A D++ A V
Sbjct: 134 KVSNSASGLGSAFDFSTSAHV 154
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 391
N+ E E + L M W D +L W+ ++ T + V+ E++W PD+VL N A
Sbjct: 77 NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVLFNNA 131
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 391
N+ E E + L M W D +L W+ ++ T + V+ E++W PD+VL N A
Sbjct: 77 NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVLFNNA 131
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 391
N+ E E + L M W D +L W+ ++ T + V+ E++W PD+VL N A
Sbjct: 77 NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVLFNNA 131
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 40.7 bits (91), Expect = 0.001
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG------CSTWLVSSERLWRPDVVLLNAA 391
++ E + I A + +W D +L+W+ +G S +S +LWRPDV+L N+
Sbjct: 59 DVDEKNQVMSILAYMDYHWNDYKLTWDPKLFGGIRDVRFSGDDDASFKLWRPDVLLFNSV 118
Query: 392 ATT-AGDYALRARVSNNGSGLLE*SAWTLALQFLC--S*TIGPXDMQTCXXKFG 544
+ + Y+ R VS+NG +F+C T P D QTC K G
Sbjct: 119 SESFDSTYSSRFIVSSNGDVQQNPPG---IFRFVCQIDVTYYPFDKQTCFLKLG 169
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Frame = +2
Query: 95 IASAAECENATSLSLMIDSLLATYDRD-SPPDSKIVVNLTLH-LRHANIRESESTVRIQA 268
+ + A E + + +L+ TYD D P D +V +T + ++ +++ T++
Sbjct: 17 LTAVAFLETSNTETLLQQLFNQTYDVDMKPSDDLTMVTITPNTFILLSMDQTQETIQYSE 76
Query: 269 DLQMNWIDKRLSWNAGEWGC-STWL-VSSERLWRPDVVLLN 385
+ + W D L WN + W+ +S+ R W PDV+ N
Sbjct: 77 EFLLRWYDPILHWNQSAVSYENDWIKISASRAWIPDVIFTN 117
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Frame = +2
Query: 179 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSER 355
PP +I + L++ ++ + E E D + +W D RLSW+ ++G + V +
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHIYVPRSK 137
Query: 356 LWRPDVVLLNAAATTAGD--YALRARVSNNGS-GLLE*SAWTLALQFLCS*TIGPXDMQT 526
+W P+ +++ + D Y A + +NGS G+ S ++ Q P D T
Sbjct: 138 VWIPETTIVDCSEIKVFDNEYTRYAWLHSNGSIGMYIASVTSVVCQM--DVYKFPMDTHT 195
Query: 527 CXXKF 541
C F
Sbjct: 196 CSVNF 200
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 218 LRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAA 394
+R ++ E + L+M W D +L+W ++G T + S+ +W PD+VL N AA
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAA 131
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 218 LRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAA 394
+R ++ E + L+M W D +L+W ++G T + S+ +W PD+VL N AA
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAA 131
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP---DSKIVVNLTLHLRHANIR---ESESTVRIQADLQMNWIDKRL 301
+I L Y ++ P +S N+T+ L I+ E++ + + ++ W D+ L
Sbjct: 27 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 86
Query: 302 SWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNNGSG 448
+WN ++G + V SE +W+PD+++ N A + ++ V +G
Sbjct: 87 TWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTG 136
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP---DSKIVVNLTLHLRHANIR---ESESTVRIQADLQMNWIDKRL 301
+I L Y ++ P +S N+T+ L I+ E++ + + ++ W D+ L
Sbjct: 27 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 86
Query: 302 SWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNNGSG 448
+WN ++G + V SE +W+PD+++ N A + ++ V +G
Sbjct: 87 TWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTG 136
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP---DSKIVVNLTLHLRHANIR---ESESTVRIQADLQMNWIDKRL 301
+I L Y ++ P +S N+T+ L I+ E++ + + ++ W D+ L
Sbjct: 11 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 70
Query: 302 SWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNNGSG 448
+WN ++G + V SE +W+PD+++ N A + ++ V +G
Sbjct: 71 TWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTG 120
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 6/122 (4%)
Frame = +2
Query: 197 VVNLTLHLRHAN---IRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 364
V+N+T+ + N + E ++I +W D L+W+ EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 365 PDVVLLNAAATTAGDYALRARVSNNGSGLLE*SAWTLALQFLCS*TI--GPXDMQTCXXK 538
PD + N T ARV +G ++ + + C ++ P D+Q C +
Sbjct: 120 PDGYIFNTVEETEPLENHNARVRYDGRVEVD---FNKLVDLTCPMSVLSFPFDVQLCALQ 176
Query: 539 FG 544
FG
Sbjct: 177 FG 178
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 6/122 (4%)
Frame = +2
Query: 197 VVNLTLHLRHAN---IRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 364
V+N+T+ + N + E ++I +W D L+W+ EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 365 PDVVLLNAAATTAGDYALRARVSNNGSGLLE*SAWTLALQFLCS*TI--GPXDMQTCXXK 538
PD + N T ARV +G ++ + + C ++ P D+Q C +
Sbjct: 120 PDGYIFNTVEETEPLENHNARVRYDGRVEVD---FNKLVDLTCPMSVLSFPFDVQLCALQ 176
Query: 539 FG 544
FG
Sbjct: 177 FG 178
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 179 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSER 355
PP +++ + + + L+ ++ E E V D W D+RL WN E+ G S V
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHIYVPQRM 109
Query: 356 LWRPDVVLLNA 388
+W P+V + +A
Sbjct: 110 IWLPEVTIADA 120
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 39.5 bits (88), Expect = 0.003
Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Frame = +2
Query: 152 LLATYDRDSPPD--SKIVVNLTLHL---RHANIRESESTVRIQADLQMNWIDKRLSWNAG 316
LL Y+ + P SK +N+T + ++ E + + ++++W+D +L W+
Sbjct: 7 LLYDYNNEVRPSVHSKEPINVTFVFSLTQIIDVDERNQILTTNSWIRLHWVDYKLVWDPR 66
Query: 317 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYALRARVSNNGSGLLE*SAWTLALQFLC 493
+ T + + S+++W+PD++L N A + V + G + W L+ F
Sbjct: 67 LYQNVTRIHIPSDKIWKPDIILYNNADAQYMKSVMSTDVIVDYLGNIH---WPLSAIFTS 123
Query: 494 S*TIG----PXDMQTCXXKF 541
S + P D QTC K+
Sbjct: 124 SCPLDVKHYPFDRQTCILKY 143
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 194 IVVNLTLHL-RHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 367
++V + L L N+ E + + L + W D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 368 DVVLLNAA 391
D+VL N A
Sbjct: 116 DIVLFNNA 123
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 194 IVVNLTLHL-RHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 367
++V + L L N+ E + + L + W D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 368 DVVLLNAA 391
D+VL N A
Sbjct: 116 DIVLFNNA 123
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 194 IVVNLTLHL-RHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 367
++V + L L N+ E + + L + W D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 368 DVVLLNAA 391
D+VL N A
Sbjct: 116 DIVLFNNA 123
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 206 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 367
L +L+ ++E E V + +L W D RLSWN+ + T V E++W P
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNSSLYSNIPTVFVRQEKVWSP 133
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 38.7 bits (86), Expect = 0.006
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 254 VRIQADLQMNWIDKRLSWNAGEWGCSTW-LVSSERLWRPDV 373
+ I L+++W D+RL WN EW L S RLW PD+
Sbjct: 101 MNINGFLKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 38.7 bits (86), Expect = 0.006
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 254 VRIQADLQMNWIDKRLSWNAGEWGCSTW-LVSSERLWRPDV 373
+ I L+++W D+RL WN EW L S RLW PD+
Sbjct: 101 MNINGFLKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 38.3 bits (85), Expect = 0.008
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Frame = +2
Query: 86 TCAIASAAECE-NATSLSLMIDSLLATYDRDS-PPDSKIVVNLTLHLRH-ANIRESESTV 256
T ++ A CE N+ ++ LL YD+ P ++ + V++ L ++ ++I E S+
Sbjct: 20 TESLVDPAHCEYNSNHRKSILTDLLQDYDKTMVPSNNSVQVSVELTVQDISSISEISSSF 79
Query: 257 RIQADLQMNWIDKRLSWNAGEWGCSTWLVS--SERLWRPDVVLLNAAAT 397
W D RL + + L S SERLW P+V +N+ +T
Sbjct: 80 IADVWFSQVWYDPRLEYRNISCKTNLSLDSYVSERLWTPNVCFVNSKST 128
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 37.9 bits (84), Expect = 0.010
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 146 DSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW- 322
+SL+ S P ++ +L L N+ E ++ M W D ++ W+ E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 323 GCSTWLVSSERLWRPDVVLLNAA 391
G T V +++W PD+VL N A
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNA 119
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 37.9 bits (84), Expect = 0.010
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 146 DSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW- 322
+SL+ S P ++ +L L N+ E ++ M W D ++ W+ E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 323 GCSTWLVSSERLWRPDVVLLNAA 391
G T V +++W PD+VL N A
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNA 119
>Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical
protein K03B8.9 protein.
Length = 564
Score = 37.1 bits (82), Expect = 0.017
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 173 DSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSS 349
D K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++
Sbjct: 73 DHKKSLKVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPF 131
Query: 350 ERLWRPDVVLLNA 388
LW PD L N+
Sbjct: 132 HHLWIPDTYLYNS 144
>U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit precursor protein.
Length = 564
Score = 37.1 bits (82), Expect = 0.017
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 173 DSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSS 349
D K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++
Sbjct: 73 DHKKSLKVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPF 131
Query: 350 ERLWRPDVVLLNA 388
LW PD L N+
Sbjct: 132 HHLWIPDTYLYNS 144
>U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 564
Score = 37.1 bits (82), Expect = 0.017
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 173 DSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSS 349
D K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++
Sbjct: 73 DHKKSLKVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPF 131
Query: 350 ERLWRPDVVLLNA 388
LW PD L N+
Sbjct: 132 HHLWIPDTYLYNS 144
>AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine
receptor (62.5 kD)(acr-23) protein.
Length = 545
Score = 37.1 bits (82), Expect = 0.017
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 8/127 (6%)
Frame = +2
Query: 188 SKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVS-SERLW 361
S I V L+L L + E + + + A W+D+ L W+ E+ T +++ + +W
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 362 RPDVVLLNA-----AATTAGDYALRARVSNNGSGLLE*SAWTL-ALQFLCS*TIGPXDMQ 523
PD L N+ +A+ + + N ++E T+ + L + P D Q
Sbjct: 110 LPDTTLYNSLEMDDSASKKLTHVKLTTLGKNQGAMVELLYPTIYKISCLLNLKYFPFDTQ 169
Query: 524 TCXXKFG 544
TC FG
Sbjct: 170 TCRMTFG 176
>AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholine
receptor protein 23 protein.
Length = 545
Score = 37.1 bits (82), Expect = 0.017
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 8/127 (6%)
Frame = +2
Query: 188 SKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVS-SERLW 361
S I V L+L L + E + + + A W+D+ L W+ E+ T +++ + +W
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 362 RPDVVLLNA-----AATTAGDYALRARVSNNGSGLLE*SAWTL-ALQFLCS*TIGPXDMQ 523
PD L N+ +A+ + + N ++E T+ + L + P D Q
Sbjct: 110 LPDTTLYNSLEMDDSASKKLTHVKLTTLGKNQGAMVELLYPTIYKISCLLNLKYFPFDTQ 169
Query: 524 TCXXKFG 544
TC FG
Sbjct: 170 TCRMTFG 176
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 36.7 bits (81), Expect = 0.023
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Frame = +2
Query: 104 AAECENATSL----SLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA-NIRESESTVRI 262
A CEN +L S +++ + YDR P ++VN+T+ L ++E++
Sbjct: 57 ALNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVLGILIELKENQQLAAY 116
Query: 263 QADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 388
W D RLSW+ ++ G +V +W P + + N+
Sbjct: 117 VISHTQRWYDGRLSWDPSKYRGQREVIVPQTMVWIPKLFVYNS 159
>AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ion
channel protein 12 protein.
Length = 425
Score = 36.7 bits (81), Expect = 0.023
Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 3/107 (2%)
Frame = +2
Query: 233 IRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGD 409
+ E +++ +W D L W+ EW G + +W PD + N T
Sbjct: 68 VNEQNEQIKLLIWFPQSWKDDYLVWDPDEWDGIEKITIPKSMVWLPDGYIFNTVEETDTL 127
Query: 410 YALRARVSNNGSGLLE*SAWTLALQFLCS*TI--GPXDMQTCXXKFG 544
RV NG ++ + + +C ++ P D+Q C +FG
Sbjct: 128 DNHNVRVHYNGKVEVD---FNKLIDLICPMSVLSFPFDVQLCALQFG 171
>Z83120-8|CAE46678.2| 511|Caenorhabditis elegans Hypothetical
protein R06A4.10b protein.
Length = 511
Score = 36.3 bits (80), Expect = 0.031
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 8/127 (6%)
Frame = +2
Query: 188 SKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LW 361
S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++ +W
Sbjct: 5 SPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIW 64
Query: 362 RPDVVLLNAAATTAGD--YALRARVSNNGSG---LLE*SAWTL-ALQFLCS*TIGPXDMQ 523
PD L N+ + L A+V+ G G +E T+ L L + P D+Q
Sbjct: 65 LPDTTLYNSLVMKDDENRRLLHAKVTTLGEGNGAFIELLYPTIYKLSCLLNLRFFPFDVQ 124
Query: 524 TCXXKFG 544
+C FG
Sbjct: 125 SCRLLFG 131
>Z83120-7|CAB51466.2| 514|Caenorhabditis elegans Hypothetical
protein R06A4.10a protein.
Length = 514
Score = 36.3 bits (80), Expect = 0.031
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 8/127 (6%)
Frame = +2
Query: 188 SKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LW 361
S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++ +W
Sbjct: 5 SPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIW 64
Query: 362 RPDVVLLNAAATTAGD--YALRARVSNNGSG---LLE*SAWTL-ALQFLCS*TIGPXDMQ 523
PD L N+ + L A+V+ G G +E T+ L L + P D+Q
Sbjct: 65 LPDTTLYNSLVMKDDENRRLLHAKVTTLGEGNGAFIELLYPTIYKLSCLLNLRFFPFDVQ 124
Query: 524 TCXXKFG 544
+C FG
Sbjct: 125 SCRLLFG 131
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 36.3 bits (80), Expect = 0.031
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +2
Query: 116 ENATSLS-LMIDSLLATYDRDSPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWI 289
E+A L+ L I +A+ + + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 290 DKRLSWNAGEWGCSTWLVSS-ERLWRP 367
D RL WN W + +V S +W P
Sbjct: 93 DDRLMWNQDTWKKNKLVVHSFHHIWVP 119
>AY523515-1|AAR98637.1| 553|Caenorhabditis elegans acetylcholine
receptor 20 (63.9kD) alternative variant a protein.
Length = 553
Score = 36.3 bits (80), Expect = 0.031
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 8/127 (6%)
Frame = +2
Query: 188 SKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LW 361
S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++ +W
Sbjct: 47 SPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIW 106
Query: 362 RPDVVLLNAAATTAGD--YALRARVSNNGSG---LLE*SAWTL-ALQFLCS*TIGPXDMQ 523
PD L N+ + L A+V+ G G +E T+ L L + P D+Q
Sbjct: 107 LPDTTLYNSLVMKDDENRRLLHAKVTTLGEGNGAFIELLYPTIYKLSCLLNLRFFPFDVQ 166
Query: 524 TCXXKFG 544
+C FG
Sbjct: 167 SCRLLFG 173
>Z74044-1|CAA98550.1| 548|Caenorhabditis elegans Hypothetical
protein T26H10.1 protein.
Length = 548
Score = 35.9 bits (79), Expect = 0.040
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHL---RHANIRESES 250
T A A+ T + L+ D LL YD+ + P D+ +N++ + + + E +
Sbjct: 12 TTASLCIADTPVPTQIRLVHD-LLDNYDKKAKPMWDNSKPINVSFSMDLYQILELNEPQQ 70
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNA 388
+ + A + W D+ L WN ++ T L + + +W PD L N+
Sbjct: 71 YILLNAWIIERWFDEFLYWNPDDYENITELRLPYDSIWLPDTTLYNS 117
>Z74039-11|CAA98508.1| 548|Caenorhabditis elegans Hypothetical
protein T26H10.1 protein.
Length = 548
Score = 35.9 bits (79), Expect = 0.040
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHL---RHANIRESES 250
T A A+ T + L+ D LL YD+ + P D+ +N++ + + + E +
Sbjct: 12 TTASLCIADTPVPTQIRLVHD-LLDNYDKKAKPMWDNSKPINVSFSMDLYQILELNEPQQ 70
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNA 388
+ + A + W D+ L WN ++ T L + + +W PD L N+
Sbjct: 71 YILLNAWIIERWFDEFLYWNPDDYENITELRLPYDSIWLPDTTLYNS 117
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 35.9 bits (79), Expect = 0.040
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 206 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 367
L +L+ ++E V + +L W D RLSWN + ST E++W P
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWNISLYSNVSTIFARQEKVWSP 133
>AF077307-1|AAC98095.1| 548|Caenorhabditis elegans acetyl choline
receptor alpha subunitDES-2 protein.
Length = 548
Score = 35.9 bits (79), Expect = 0.040
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHL---RHANIRESES 250
T A A+ T + L+ D LL YD+ + P D+ +N++ + + + E +
Sbjct: 12 TTASLCIADTPVPTQIRLVHD-LLDNYDKKAKPMWDNSKPINVSFSMDLYQILELNEPQQ 70
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNA 388
+ + A + W D+ L WN ++ T L + + +W PD L N+
Sbjct: 71 YILLNAWIIERWFDEFLYWNPDDYENITELRLPYDSIWLPDTTLYNS 117
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 35.5 bits (78), Expect = 0.053
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 2/128 (1%)
Frame = +2
Query: 164 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWL 340
YD D+P + L L+ + E V + ++ W D RLSWNA + T+
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNASLYDDIDTFY 122
Query: 341 VSSERLWRPDVVLLNA-AATTAGDYALRARVSNNGSGLLE*SAWTLALQFLCS*TIGPXD 517
+W P + A D R N+ + + + ++ + P D
Sbjct: 123 TRQSNVWSPTLSAFGADELVDLRDPDFRMVCVNSNGYIYDYISVRVSSSCPMNVYKFPFD 182
Query: 518 MQTCXXKF 541
QTC KF
Sbjct: 183 YQTCQIKF 190
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 35.1 bits (77), Expect = 0.071
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNA 388
+I E + L+M+W D L+W+ E+G + +W+PDV+L N+
Sbjct: 63 DIDEKHQIMNSNVWLRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNS 116
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 35.1 bits (77), Expect = 0.071
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
Frame = +2
Query: 254 VRIQADLQMNWIDKRLSWNAGEWGCST---WLVSSERLWRPDVVLLNAAATTAGDYALRA 424
+ + A L+ W+D RL W+ ++ T + ++WRPD++L N+A+
Sbjct: 12 IEVNAWLKYVWMDYRLQWDPLQYDNITSIRFAGGENQIWRPDILLYNSASEDFDSSFKSN 71
Query: 425 RVSNNGSGLLE*SAWTLALQFLCS*TIGPXDMQTCXXKFG 544
V N + T P D Q C KFG
Sbjct: 72 EVVYNTGEVNWIPPGIFRASCKMDITYFPFDDQVCYLKFG 111
>U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine
receptor protein 5 protein.
Length = 548
Score = 35.1 bits (77), Expect = 0.071
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 200 VNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDV 373
VNL++ L ++ E ++ + + +W D+ L WN ++G + +V ++W PD
Sbjct: 133 VNLSMSLYQILDVDEHMQSIEVNVWMVQHWYDEFLDWNPVDYGMINRTIVPYHQIWIPDT 192
Query: 374 VLLNA 388
L N+
Sbjct: 193 YLYNS 197
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 35.1 bits (77), Expect = 0.071
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNA 388
+I E + L+M+W D L+W+ E+G + +W+PDV+L N+
Sbjct: 63 DIDEKHQIMNSNVWLRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNS 116
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 35.1 bits (77), Expect = 0.071
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 212 LHLRHAN-IRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 364
LH+ H + I++ + +++ W+D+RL WN + G T+ + +WR
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNYSGIRTFSTTRHEMWR 114
>Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical
protein T01H10.7 protein.
Length = 399
Score = 34.3 bits (75), Expect = 0.12
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Frame = +2
Query: 164 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL- 340
Y+ +P V+L +L+ + E E V + ++ W D R++W++ +G L
Sbjct: 64 YNPLAPKRFNYTVSL-YYLKLVEVIEPEEKVSVVLEMAEYWYDPRIAWDSSLYGDIKMLH 122
Query: 341 VSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSGLLE*SAWTLALQFLCS*TIGPX 514
+ +++W P + L +N A V N G S ++L ++ P
Sbjct: 123 MRQDKVWSPTLSLFRINDIADFRDPDFRMVCVENTGHTYTTLSV-KISLNCPLDVSMFPY 181
Query: 515 DMQTCXXKF 541
D QTC +F
Sbjct: 182 DSQTCRIQF 190
>Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical
protein T09A5.3 protein.
Length = 538
Score = 34.3 bits (75), Expect = 0.12
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Frame = +2
Query: 182 PDSKIVVNLTLHLRHANIRESE-STVRIQADLQMNWIDKRLSWNAGEWG--CSTWLVSSE 352
P + V + + ++ + +++ + + A L+ W D RL WN ++ S +
Sbjct: 52 PKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGED 111
Query: 353 RLWRPDVVLLN---AAATTAGDYALRARVSNNGSGLLE-*SAWTLALQFLCS*TIGPXDM 520
++W+PD++L N + D + G++ L T+ P D
Sbjct: 112 QIWQPDILLYNRYIEDEQESFDITYKTNAVAYSDGVINWIPPGIFKLSCKMDITLFPFDE 171
Query: 521 QTCXXKFG 544
Q C KFG
Sbjct: 172 QICFMKFG 179
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 34.3 bits (75), Expect = 0.12
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Frame = +2
Query: 110 ECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRE-SESTVRIQADLQMN- 283
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 284 -WIDKRLSWNAGEWGCSTWL---VSS--ERLWRPDVVLLNAAATT 400
W D RLS+ C+T + VS +++W PD ++N+ +++
Sbjct: 68 IWQDPRLSFKHLN-VCATNITLKVSDFRKKIWTPDTCIINSKSSS 111
>AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-7 protein.
Length = 538
Score = 34.3 bits (75), Expect = 0.12
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Frame = +2
Query: 182 PDSKIVVNLTLHLRHANIRESE-STVRIQADLQMNWIDKRLSWNAGEWG--CSTWLVSSE 352
P + V + + ++ + +++ + + A L+ W D RL WN ++ S +
Sbjct: 52 PKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGED 111
Query: 353 RLWRPDVVLLN---AAATTAGDYALRARVSNNGSGLLE-*SAWTLALQFLCS*TIGPXDM 520
++W+PD++L N + D + G++ L T+ P D
Sbjct: 112 QIWQPDILLYNRYIEDEQESFDITYKTNAVAYSDGVINWIPPGIFKLSCKMDITLFPFDE 171
Query: 521 QTCXXKFG 544
Q C KFG
Sbjct: 172 QICFMKFG 179
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 33.5 bits (73), Expect = 0.22
Identities = 23/89 (25%), Positives = 23/89 (25%)
Frame = -2
Query: 895 TXXXTXTSAXXXGGXXXPAXXXXXGXGXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXX 716
T SA GG G G G GG P P PG PG
Sbjct: 76 TARQAYASAGGAGGGGGYGAGGGGGGGGGEAAGGGGGCTGCCNPGPPGPGGRPGKPGTPG 135
Query: 715 XXXXPXQAGXPPXHXXXPXAPXXPXPXHP 629
P G P P P P P
Sbjct: 136 KPGAPGNPGASGKGAAAPCEPSTPPPCQP 164
>AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ion
channel protein 5 protein.
Length = 340
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +2
Query: 161 TYDRD-SPPDSKIVVNLTLH-LRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCS- 331
TYD + P D+ V +T + ++ +++ T+ + + W D L WN + +
Sbjct: 39 TYDVNVKPSDTLTTVTITPNTFLLLSMDQTQETILFSQEFLLKWYDPILHWNRTLFDYNR 98
Query: 332 TWL-VSSERLWRPDVV 376
W+ +S R+W PDV+
Sbjct: 99 EWIKISVSRVWVPDVI 114
>AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical
protein C04C3.2 protein.
Length = 464
Score = 32.3 bits (70), Expect = 0.50
Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSK----IVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLS 304
+I+++ YD+ P ++ ++V++T+ L +RE++ W D +L+
Sbjct: 44 LIETIQRRYDKRVRPFAESNRPVIVHMTIVLGILTEVRENQQVASFVISHVQKWRDPKLA 103
Query: 305 WNAGEWGCSTWLVSSERL-WRPDVVLLNAAAT 397
WN + T +V L W P + + N+ T
Sbjct: 104 WNPADHSGLTQVVMPRSLVWVPKLFIYNSMDT 135
>AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform b protein.
Length = 513
Score = 32.3 bits (70), Expect = 0.50
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 10/103 (9%)
Frame = +2
Query: 110 ECENATSLSLMIDSLL----ATYDRDSPP-----DSKIVVNLTLHLRH-ANIRESESTVR 259
E + + + +D+LL YD SPP + VV L +++ ++ R +
Sbjct: 19 EASRSEPVPIYLDNLLNAGRQVYDNQSPPVQHDKEEVTVVELAMYIEGMSSFRTQTMDFQ 78
Query: 260 IQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNA 388
+ Q W D RL+ N ++W+PDV NA
Sbjct: 79 LDVYFQQFWRDPRLAHNETRRVLVKDKAVLHKMWKPDVYFANA 121
>AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform a protein.
Length = 546
Score = 32.3 bits (70), Expect = 0.50
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 10/103 (9%)
Frame = +2
Query: 110 ECENATSLSLMIDSLL----ATYDRDSPP-----DSKIVVNLTLHLRH-ANIRESESTVR 259
E + + + +D+LL YD SPP + VV L +++ ++ R +
Sbjct: 19 EASRSEPVPIYLDNLLNAGRQVYDNQSPPVQHDKEEVTVVELAMYIEGMSSFRTQTMDFQ 78
Query: 260 IQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNA 388
+ Q W D RL+ N ++W+PDV NA
Sbjct: 79 LDVYFQQFWRDPRLAHNETRRVLVKDKAVLHKMWKPDVYFANA 121
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 31.9 bits (69), Expect = 0.66
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -2
Query: 790 GGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXPXHPHG 623
GG GP P P P PG P Q P A P P P G
Sbjct: 205 GGEGPAGPPGPPGPAGNPGTDGAPGNPGAPGQVTETPGTPGPAGAAGPPGPPGPAG 260
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 31.5 bits (68), Expect = 0.87
Identities = 26/80 (32%), Positives = 27/80 (33%), Gaps = 2/80 (2%)
Frame = -2
Query: 802 PGXXGGRGPXAXPX-PXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPX-PXHP 629
PG G G P P PG PGA P +A PP P P P P P
Sbjct: 112 PGPGGSPGKPGKPGKPGAPGA-PGAAGKGASA--PCEAKTPPPCQPCPAGPPGPPGPDGP 168
Query: 628 HGXXXXDXXXXSCVXPRNPG 569
G D S P PG
Sbjct: 169 AGPAGPDGEAGSPAAPSPPG 188
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 31.5 bits (68), Expect = 0.87
Identities = 26/80 (32%), Positives = 27/80 (33%), Gaps = 2/80 (2%)
Frame = -2
Query: 802 PGXXGGRGPXAXPX-PXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPX-PXHP 629
PG G G P P PG PGA P +A PP P P P P P
Sbjct: 111 PGVAGNPGKPGKPGKPGAPGN-PGA--PGKGAAVPCEAKTPPPCKPCPAGPPGPPGPDGP 167
Query: 628 HGXXXXDXXXXSCVXPRNPG 569
G D S P PG
Sbjct: 168 AGPAGPDGEAGSPAAPSPPG 187
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/60 (30%), Positives = 20/60 (33%)
Frame = -2
Query: 802 PGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXPXHPHG 623
PG G +GP P P G R P + G P P A P P P G
Sbjct: 146 PGRPGPKGPSGLPGSAGPAGGNGRRGPPGPVGGPGEQG-PQGDAGRPGAAGRPGPAGPRG 204
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/60 (30%), Positives = 20/60 (33%)
Frame = -2
Query: 802 PGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXPXHPHG 623
PG G +GP P P G R P + G P P A P P P G
Sbjct: 140 PGCPGPKGPSGLPGSAGPAGGNGRRGPPGPVGGPGEQG-PQGDAGRPGAAGRPGPAGPRG 198
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 31.5 bits (68), Expect = 0.87
Identities = 25/81 (30%), Positives = 25/81 (30%), Gaps = 3/81 (3%)
Frame = -2
Query: 802 PGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXP--PXHXXXPXAPXXPXPXHP 629
PG G GP P P P PGA P G P P P P P P
Sbjct: 252 PGTPGPAGPPGPPGPIGPPGQPGA----PGSSQPGPQGPPGDPGIDGAPGNPGSPGEPGP 307
Query: 628 HGXXXXDXXXXSCVXPRN-PG 569
G C PR PG
Sbjct: 308 PGQPGAGGGCDHCPPPRTAPG 328
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXP 638
G PG GG P P P PGA P G P P P P
Sbjct: 204 GEPGAPGTPGGNALPGPPGPPGPQGPPGA---DGLPGNPGAPGVPGQVIEVPGTPGPAGP 260
Query: 637 XHPHG 623
P G
Sbjct: 261 PGPPG 265
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXP 638
G PG G P P P PGA P Q G P AP P
Sbjct: 168 GDAGAPGQAGQGSGAGAPGPAGPKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGP 227
Query: 637 XHPHG 623
P G
Sbjct: 228 QGPPG 232
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXP 638
G PG G P P P PGA P Q G P AP P
Sbjct: 168 GDAGAPGQAGQGSGAGAPGPAGPKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGP 227
Query: 637 XHPHG 623
P G
Sbjct: 228 QGPPG 232
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXP 638
G PG G P P P PGA P Q G P AP P
Sbjct: 168 GDAGAPGQAGQGSGAGAPGPAGPKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGP 227
Query: 637 XHPHG 623
P G
Sbjct: 228 QGPPG 232
>Z81085-2|CAB03114.2| 618|Caenorhabditis elegans Hypothetical
protein F46F3.2 protein.
Length = 618
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = +2
Query: 164 YDRDSPP----DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGEWGC 328
YD PP D + V + + ++ +N S + A ++M+WID RL +
Sbjct: 259 YDARQPPSLHVDDTVTVKVGIAVQSMSNFELSTMDYDLDAWVRMSWIDPRLRHDLSRPIL 318
Query: 329 STWLVSSERLWRPDVVLLNAAATT 400
+ +WRPD + N+ +T
Sbjct: 319 VNDYTFLKMIWRPDPIFTNSKYST 342
>AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical
protein F09G2.5 protein.
Length = 563
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNA 388
L M W D+RL+ N T + ++R+W PD+ +N+
Sbjct: 175 LAMGWFDRRLAHNCTHPILVTSKLIADRIWYPDLYFVNS 213
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/75 (30%), Positives = 23/75 (30%), Gaps = 5/75 (6%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXP----XQAGXP-PXHXXXPXAP 653
G PG G GP P P P PGA P Q G P P P
Sbjct: 187 GPAGQPGRNGPDGPNGEPGPKGPPGQPGADGQPGMPGEPGKDAPQEGSPVPGDPGPPGDS 246
Query: 652 XXPXPXHPHGXXXXD 608
P P P G D
Sbjct: 247 GIPGPPGPPGMAGPD 261
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXP 638
G PG G G A P P P PG G P P AP P
Sbjct: 223 GPSGAPGAPGQSGGSALPGPPGPAGSPGRSGQPGSNGNVGAPGAPGQVVDVPGAPGPAGP 282
Query: 637 XHPHG 623
P G
Sbjct: 283 PGPPG 287
>Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical
protein F11A5.10 protein.
Length = 461
Score = 30.3 bits (65), Expect = 2.0
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Frame = +2
Query: 125 TSLSLMIDSLLAT-YD-RDSPPDSK---IVVNLTLHLRH-ANIRESESTVRIQADLQMNW 286
TS S ++ L + YD R PP +VV++ + LR + I Q L+ +W
Sbjct: 61 TSDSKILAHLFTSGYDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESW 120
Query: 287 IDKRLSWNAGEWGCSTWLVSS--ERLWRPDVVLLN---AAATTAGDYALRARVSNNGSGL 451
IDKRLS+ G +++ + ++W PD N A T + R+ N+G+ L
Sbjct: 121 IDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVL 180
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/67 (26%), Positives = 18/67 (26%)
Frame = -2
Query: 823 GXGXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXP 644
G G PG G RGP P G A PP P P P
Sbjct: 161 GPGELGGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQPGQPGEPGSP 220
Query: 643 XPXHPHG 623
P G
Sbjct: 221 GEPGPDG 227
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/67 (26%), Positives = 18/67 (26%)
Frame = -2
Query: 823 GXGXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXP 644
G G PG G RGP P G A PP P P P
Sbjct: 161 GPGELGGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQPGQPGEPGSP 220
Query: 643 XPXHPHG 623
P G
Sbjct: 221 GEPGPDG 227
>U14524-1|AAA50785.1| 461|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl alpha protein.
Length = 461
Score = 30.3 bits (65), Expect = 2.0
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Frame = +2
Query: 125 TSLSLMIDSLLAT-YD-RDSPPDSK---IVVNLTLHLRH-ANIRESESTVRIQADLQMNW 286
TS S ++ L + YD R PP +VV++ + LR + I Q L+ +W
Sbjct: 61 TSDSKILAHLFTSGYDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESW 120
Query: 287 IDKRLSWNAGEWGCSTWLVSS--ERLWRPDVVLLN---AAATTAGDYALRARVSNNGSGL 451
IDKRLS+ G +++ + ++W PD N A T + R+ N+G+ L
Sbjct: 121 IDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVL 180
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/83 (27%), Positives = 23/83 (27%), Gaps = 7/83 (8%)
Frame = -2
Query: 817 GXXXXPGXXGGR-----GPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXP--PXHXXXPX 659
G PG G R GP P P P PG P Q G P P H
Sbjct: 195 GSPGNPGRGGQRSRGLPGPSGRPGPQGPAGGPGQPGQSGGSGTPGQPGAPGAPGHPGQAG 254
Query: 658 APXXPXPXHPHGXXXXDXXXXSC 590
P P G D C
Sbjct: 255 TPGTPGAPGNSGAPGGDAAYCPC 277
>Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical
protein B0491.4 protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 233 IRESESTVRIQADLQMNWIDKRLSWN-AGEWGC--STWLVSSERLWRPDVV 376
++ S + D+ +NW D+R+ W+ GE+ ++ +S +W P V+
Sbjct: 83 VKGSSYQFNVFGDIYLNWKDERMKWDKKGEFENYEHLYIFNSSAIWTPHVI 133
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 29.9 bits (64), Expect = 2.7
Identities = 26/86 (30%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAP---XX 647
G PG GG G A P P G PG P QAG P P P
Sbjct: 176 GKPGAPGVGGGSG--APGAPGPKGA-PGGPGQPGRDGQPGQAGQPGSSSSEPGQPGPNGQ 232
Query: 646 PXPXHPHGXXXXDXXXXSCVXPRNPG 569
P P P G P PG
Sbjct: 233 PGPRGPPGQAGSPGGNGQPGGPGQPG 258
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/83 (25%), Positives = 23/83 (27%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXP 638
G PG GG P P P PG+ P P P P P
Sbjct: 171 GTNGAPGAPGGDAPPGEAGPKGPPGPPGSPGAPGEPGRP--GDDAPSEPLIPGEPGPQGP 228
Query: 637 XHPHGXXXXDXXXXSCVXPRNPG 569
P G D + P PG
Sbjct: 229 PGPPGQAGPDGQPGAPGGPGTPG 251
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXP 638
G P GG+GP P P PG P Q+G P P P
Sbjct: 155 GNPGAPAHGGGQGPPGPPGPAGDAGSPGQAGAPGNPGRPGQSG--QRSRGLPGPSGRPGP 212
Query: 637 XHPHG 623
P G
Sbjct: 213 QGPPG 217
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 823 GXGXXXXPGXXGGRGPXAXPXPXPPGXXPGAR 728
G G PG GG GP P P P P R
Sbjct: 624 GGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGR 655
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 823 GXGXXXXPGXXGGRGPXAXPXPXPPGXXPGAR 728
G G PG GG GP P P P P R
Sbjct: 624 GGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGR 655
>Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical
protein R11G10.1a protein.
Length = 657
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 194 IVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLV--SSERLWR 364
+VV++ + LR + I +Q + +W+DKRLS+ +L+ + + +W
Sbjct: 281 VVVSVNMLLRSISKIDNVNMEYSVQLTFRESWVDKRLSFGVKGDAQPDFLILTAGQEIWM 340
Query: 365 PDVVLLN 385
PD N
Sbjct: 341 PDSFFQN 347
>Z81118-1|CAB03329.1| 478|Caenorhabditis elegans Hypothetical
protein R11G10.1b protein.
Length = 478
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 194 IVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLV--SSERLWR 364
+VV++ + LR + I +Q + +W+DKRLS+ +L+ + + +W
Sbjct: 102 VVVSVNMLLRSISKIDNVNMEYSVQLTFRESWVDKRLSFGVKGDAQPDFLILTAGQEIWM 161
Query: 365 PDVVLLN 385
PD N
Sbjct: 162 PDSFFQN 168
>Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical
protein R11G10.1a protein.
Length = 657
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 194 IVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLV--SSERLWR 364
+VV++ + LR + I +Q + +W+DKRLS+ +L+ + + +W
Sbjct: 281 VVVSVNMLLRSISKIDNVNMEYSVQLTFRESWVDKRLSFGVKGDAQPDFLILTAGQEIWM 340
Query: 365 PDVVLLN 385
PD N
Sbjct: 341 PDSFFQN 347
>U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protein
173 protein.
Length = 325
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/65 (26%), Positives = 18/65 (27%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXP 638
G PG G GP P P P G P + PP P P
Sbjct: 205 GEDAGPGRQGMPGPTGPPGPRGPPGETGDEGEGGPDGIPMEKKSPPGPRGPPGPAGPDGP 264
Query: 637 XHPHG 623
P G
Sbjct: 265 QGPEG 269
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/55 (29%), Positives = 18/55 (32%)
Frame = -2
Query: 790 GGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXPXHPH 626
GG P P PPG P + P PP P P P HP+
Sbjct: 691 GGPPPPGQPY-GPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPPPPQPGHPY 744
>AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A
protein protein.
Length = 657
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 194 IVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLV--SSERLWR 364
+VV++ + LR + I +Q + +W+DKRLS+ +L+ + + +W
Sbjct: 281 VVVSVNMLLRSISKIDNVNMEYSVQLTFRESWVDKRLSFGVKGDAQPDFLILTAGQEIWM 340
Query: 365 PDVVLLN 385
PD N
Sbjct: 341 PDSFFQN 347
>AJ000537-1|CAA04170.1| 478|Caenorhabditis elegans GluClalpha2B
protein protein.
Length = 478
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 194 IVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLV--SSERLWR 364
+VV++ + LR + I +Q + +W+DKRLS+ +L+ + + +W
Sbjct: 102 VVVSVNMLLRSISKIDNVNMEYSVQLTFRESWVDKRLSFGVKGDAQPDFLILTAGQEIWM 161
Query: 365 PDVVLLN 385
PD N
Sbjct: 162 PDSFFQN 168
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/55 (29%), Positives = 18/55 (32%)
Frame = -2
Query: 790 GGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXPXHPH 626
GG P P PPG P + P PP P P P HP+
Sbjct: 691 GGPPPPGQPY-GPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPPPPQPGHPY 744
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 4/69 (5%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXP----PGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPX 650
G PG GG GP P P PG PG Q G P P
Sbjct: 128 GMPGNPGK-GGSGPCHPVVPTPCKPCPGGRPGPPGPPGRPGSDGQPGRPATGGGAAPRPG 186
Query: 649 XPXPXHPHG 623
P P P G
Sbjct: 187 PPGPKGPRG 195
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAG 689
G PG G G P P P PGA P QAG
Sbjct: 228 GQPGAPGQPGHDGQPGAPGPKGPNGNPGAPGADGNPGAPGQAG 270
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/67 (26%), Positives = 19/67 (28%)
Frame = -2
Query: 823 GXGXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXP 644
G G G G G P P P PGA + P P AP
Sbjct: 154 GAGEPGRDGLAGRPGARGSPGPRGPSGNPGADGPAGQLGPQGGSNVAPSPAGEPGAPGAQ 213
Query: 643 XPXHPHG 623
P P G
Sbjct: 214 GPKGPPG 220
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/67 (26%), Positives = 19/67 (28%)
Frame = -2
Query: 823 GXGXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXP 644
G G G G G P P P PGA + P P AP
Sbjct: 207 GAGEPGRDGLAGRPGARGSPGPRGPSGNPGADGPAGQLGPQGGSNVAPSPAGEPGAPGAQ 266
Query: 643 XPXHPHG 623
P P G
Sbjct: 267 GPKGPPG 273
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 164 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWL 340
+D D+P + L L+ + E + V + ++ W D RL+WN ++ ++
Sbjct: 65 HDPDAPGRWNYTL-LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWNKEDYDDIASIY 123
Query: 341 VSSERLWRP 367
+W P
Sbjct: 124 TRQANVWSP 132
>Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical
protein C15A7.1 protein.
Length = 403
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Frame = +2
Query: 146 DSLLATYDRDSPPDSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGEW 322
+ +L D P + + + L L H + + E + + ++ W D+RL W+ +
Sbjct: 39 EDVLGPLDGSMPSELPVFIGAQLKLDHISRVDEKTGFLTLALTVKFMWSDERLQWDPSHY 98
Query: 323 GCST---------WLVSSERLWRPDVVLLN 385
T WL ++W+P + + N
Sbjct: 99 SGFTRTRLEFVDFWLY---QIWKPRIYMTN 125
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAG 689
G PG G G P P P PGA P QAG
Sbjct: 228 GPPGAPGQPGHDGQPGAPGPKGPNGNPGAPGADGNPGAPGQAG 270
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAG 689
G PG G G P P P PGA P QAG
Sbjct: 228 GPPGAPGQPGHDGQPGAPGPKGPNGNPGAPGADGNPGAPGQAG 270
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAG 689
G PG G G P P P PGA P QAG
Sbjct: 228 GPPGAPGQPGHDGQPGAPGPKGPNGNPGAPGADGNPGAPGQAG 270
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAG 689
G PG G G P P P PGA P QAG
Sbjct: 228 GPPGAPGQPGHDGQPGAPGPKGPNGNPGAPGADGNPGAPGQAG 270
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXP 638
G PG GG GP P P P PGA P P P P P
Sbjct: 128 GDAGSPGEAGGAGP---PGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGP--PGP 182
Query: 637 XHPHG 623
P G
Sbjct: 183 PGPDG 187
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXP 683
G PG G GP P P PG+ P Q G P
Sbjct: 184 GPDGAPGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGGPGQDGAP 228
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/65 (26%), Positives = 18/65 (27%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXP 638
G PG G G + P P P PG G P P P P
Sbjct: 189 GPSGAPGAPGQSGGASLPGPPGPAGPPGPSGQPGSNGNAGAPGAPGQVVDVPGTPGPAGP 248
Query: 637 XHPHG 623
P G
Sbjct: 249 PGPPG 253
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/65 (26%), Positives = 18/65 (27%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXP 638
G PG G G + P P P PG G P P P P
Sbjct: 185 GPSGAPGVPGQTGGASLPGPPGPAGPPGPSGQPGSNGNAGAPGAPGQVVDVPGTPGPAGP 244
Query: 637 XHPHG 623
P G
Sbjct: 245 PGPPG 249
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXP 638
G PG GG GP P P P PGA P P P P P
Sbjct: 128 GDAGSPGEAGGAGP---PGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGP--PGP 182
Query: 637 XHPHG 623
P G
Sbjct: 183 PGPDG 187
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXP 683
G PG G GP P P PG+ P Q G P
Sbjct: 184 GPDGAPGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGGPGQDGAP 228
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = -2
Query: 799 GXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXPXHP 629
G GG P P PG PG P G P P P P P
Sbjct: 93 GGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQP 149
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = -2
Query: 799 GXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXPXHP 629
G GG P P PG PG P G P P P P P
Sbjct: 93 GGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQP 149
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = -2
Query: 799 GXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXPXHP 629
G GG P P PG PG P G P P P P P
Sbjct: 93 GGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQP 149
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = -2
Query: 799 GXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXPXHP 629
G GG P P PG PG P G P P P P P
Sbjct: 93 GGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQP 149
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/53 (30%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = -2
Query: 778 PXAXPXPXP-PGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXPXHPHG 623
P P P P PG P + P G P P P P P P+G
Sbjct: 932 PNPIPKPNPGPGPGPPSPNGPSDPNKPSPNGPSPNGPNGPSDPNKPGPSGPNG 984
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/65 (27%), Positives = 19/65 (29%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXP 638
G PG G G P P P GA P + G P AP P
Sbjct: 173 GNAGAPGQPGHGGGSGAPGPAGPKGQRGAPGHPGQAGSPGRPGVDAQSQSNPGAPGQAGP 232
Query: 637 XHPHG 623
P G
Sbjct: 233 QGPPG 237
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/65 (26%), Positives = 18/65 (27%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXPPXHXXXPXAPXXPXP 638
G PG G G + P P P PG G P P P P
Sbjct: 186 GPSGAPGQPGRSGGASLPGPPGPAGPPGPSGQPGSNGNAGAPGAPGHVVDVPGTPGPAGP 245
Query: 637 XHPHG 623
P G
Sbjct: 246 PGPAG 250
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 1/66 (1%)
Frame = -2
Query: 817 GXXXXPGXXGGRGPXAXPXPXPPGXXPGARXXXXXXXXPXQAGXP-PXHXXXPXAPXXPX 641
G PG G G P P P PG P Q G P +P P
Sbjct: 193 GPAGAPGVPGPDGDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPG 252
Query: 640 PXHPHG 623
P P G
Sbjct: 253 PAGPPG 258
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,343,064
Number of Sequences: 27780
Number of extensions: 386567
Number of successful extensions: 2139
Number of sequences better than 10.0: 146
Number of HSP's better than 10.0 without gapping: 1392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1973
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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