Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_M07
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0281 + 21881382-21881538,21882162-21882394,21882783-218828...    31   1.6  
03_05_0145 + 21254448-21255488                                         29   5.0  

>11_06_0281 +
           21881382-21881538,21882162-21882394,21882783-21882869,
           21882920-21883396
          Length = 317

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
 Frame = +1

Query: 136 EREPEKRLPHP-------RKGSRRANYPLPARGGSDEK*RYGTLTRPR 258
           +R   +R PHP       R+G R A +P   RGG D + R    TR R
Sbjct: 177 DRRRARRRPHPLDAHPRRRRGHRTAGFPAAPRGGGDFRVRMTGYTRAR 224


>03_05_0145 + 21254448-21255488
          Length = 346

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = +1

Query: 106 GNGESGXRFREREPEKRLPHPRKGSRRANYPLPA 207
           G  E G R R R PE+R P    G+ RA  P PA
Sbjct: 113 GGMEKG-RARRRTPEQRRPKEAAGNGRARSPSPA 145


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,719,588
Number of Sequences: 37544
Number of extensions: 454467
Number of successful extensions: 956
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)