Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_M04
         (832 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119139-1|AAM50999.1|  615|Drosophila melanogaster RE41430p pro...   111   1e-24
AE014298-1780|AAF48175.2|  615|Drosophila melanogaster CG11138-P...   111   1e-24
AF160911-1|AAD46851.1| 1028|Drosophila melanogaster BcDNA.LD0556...    30   4.5  
AE014296-1819|AAF50157.1| 1028|Drosophila melanogaster CG6539-PA...    30   4.5  
BT021430-1|AAX33578.1|  290|Drosophila melanogaster GM06171p pro...    29   5.9  

>AY119139-1|AAM50999.1|  615|Drosophila melanogaster RE41430p
           protein.
          Length = 615

 Score =  111 bits (267), Expect = 1e-24
 Identities = 46/57 (80%), Positives = 52/57 (91%)
 Frame = +3

Query: 222 MSVMQKRQHCYLCDLPRMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAH 392
           MS+  KRQHCYLCDLPRMPWAM+++FSEAVCRGCVNYEGADRIE VL+ ARQ+KR H
Sbjct: 1   MSLQTKRQHCYLCDLPRMPWAMINDFSEAVCRGCVNYEGADRIEAVLDAARQMKRLH 57


>AE014298-1780|AAF48175.2|  615|Drosophila melanogaster CG11138-PC,
           isoform C protein.
          Length = 615

 Score =  111 bits (267), Expect = 1e-24
 Identities = 46/57 (80%), Positives = 52/57 (91%)
 Frame = +3

Query: 222 MSVMQKRQHCYLCDLPRMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAH 392
           MS+  KRQHCYLCDLPRMPWAM+++FSEAVCRGCVNYEGADRIE VL+ ARQ+KR H
Sbjct: 1   MSLQTKRQHCYLCDLPRMPWAMINDFSEAVCRGCVNYEGADRIEAVLDAARQMKRLH 57


>AF160911-1|AAD46851.1| 1028|Drosophila melanogaster BcDNA.LD05563
           protein.
          Length = 1028

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +3

Query: 441 TPLEAHQNGAETTRGQPAPPAHHTPTVGFTLHHPRPTAS 557
           TPLE  Q  + TT   PAPPA+      + L  P  T+S
Sbjct: 603 TPLELTQEPSPTTVTPPAPPANSINNKTYCLAAPTQTSS 641


>AE014296-1819|AAF50157.1| 1028|Drosophila melanogaster CG6539-PA
           protein.
          Length = 1028

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +3

Query: 441 TPLEAHQNGAETTRGQPAPPAHHTPTVGFTLHHPRPTAS 557
           TPLE  Q  + TT   PAPPA+      + L  P  T+S
Sbjct: 603 TPLELTQEPSPTTVTPPAPPANSINNKTYCLAAPTQTSS 641


>BT021430-1|AAX33578.1|  290|Drosophila melanogaster GM06171p
           protein.
          Length = 290

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
 Frame = +3

Query: 435 HRTPLEAHQNGAETTRGQPAPPAHHTPTVGFTLHHPRPTASAGLLAEYGSRRDE-HEGR 608
           H+ P + H+ G E  RGQ  P   HTP        PR   SA  L   G + +  H  R
Sbjct: 180 HQVPTD-HRGGHEEDRGQQHPGLPHTPA---RQQEPRACRSAQALRHQGGQGERAHPAR 234


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,983,324
Number of Sequences: 53049
Number of extensions: 724517
Number of successful extensions: 2849
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2846
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)