Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_M02
(883 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431... 253 1e-67
07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609... 250 1e-66
12_02_1265 - 27435096-27437675 29 6.5
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119... 29 6.5
09_06_0103 + 20873310-20873382,20873530-20873735 29 6.5
08_01_0152 - 1190358-1190462,1190648-1190765,1191134-1192691,119... 28 8.6
02_05_0888 - 32517876-32518087,32518320-32518694,32519551-325196... 28 8.6
01_06_0902 + 32853708-32853739,32854787-32855596,32856094-328561... 28 8.6
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 28 8.6
>03_01_0582 -
4318837-4318967,4319219-4319399,4319504-4319701,
4319791-4320053,4320453-4320597
Length = 305
Score = 253 bits (620), Expect = 1e-67
Identities = 119/195 (61%), Positives = 145/195 (74%)
Frame = +3
Query: 51 ISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWE 230
++A G L+ E+DV MLAA HLG +N +FQME YVYKRR+DG ++INL +TWE
Sbjct: 1 MAAVAGGAARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWE 60
Query: 231 KLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAF 410
KL LAAR +VAIENP D+ V S+RP+GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F
Sbjct: 61 KLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 120
Query: 411 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWW 590
EPRLLI+ DP DHQPI E++ NIP IA C+TDSP+R+VDI IP N K +SIG ++W
Sbjct: 121 SEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFW 180
Query: 591 LLAREVLXRRGCASP 635
LLAR VL RG P
Sbjct: 181 LLARMVLQMRGTILP 195
>07_03_1272 -
25360180-25360286,25360454-25360658,25360748-25360945,
25361034-25361296,25361865-25362009
Length = 305
Score = 250 bits (612), Expect = 1e-66
Identities = 116/184 (63%), Positives = 139/184 (75%)
Frame = +3
Query: 84 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 263
L+ E+D+ MLAA HLG +N +FQME YVYKRR DG ++INL +TWEKL LAAR +VA
Sbjct: 12 LSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIVA 71
Query: 264 IENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP 443
IENP D+ V S+RP+GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPRLLI+ DP
Sbjct: 72 IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDP 131
Query: 444 AQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLXRRG 623
DHQPI E++ NIP IA C+TDSP+R+VDI IP N K SIG ++WLLAR VL RG
Sbjct: 132 RTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRG 191
Query: 624 CASP 635
P
Sbjct: 192 TILP 195
>12_02_1265 - 27435096-27437675
Length = 859
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/63 (17%), Positives = 28/63 (44%)
Frame = -1
Query: 670 PNQPTTSPAXVXGEAHPRRXNTSRANNHHIKPIEWEDLVLHGIAMSTNLSGESVLHKAIT 491
P SP+ + + HP + +T+ +N+ W+++ ++ +G +A+
Sbjct: 222 PAMVANSPSQIKNQRHPGQRHTNYHSNNFSTDARWDEVQTQNLSAPAMYTGSGHKSQALA 281
Query: 490 GML 482
G +
Sbjct: 282 GTI 284
>11_06_0458 + 23808402-23808469,23808800-23809684,23810011-23811961,
23812210-23812285,23813064-23813072,23813243-23813335,
23813578-23813581,23813780-23814703,23814926-23815909,
23816073-23816118,23816376-23816951,23817253-23817798,
23817820-23818416
Length = 2252
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 151 TFSAPRWVVAASILVTSSSLRASTSNP 71
TF A RWV+AA V + L AS S+P
Sbjct: 2100 TFHAHRWVLAARSPVLKAKLSASPSSP 2126
>09_06_0103 + 20873310-20873382,20873530-20873735
Length = 92
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +2
Query: 329 VCRAHRCYAYC---GTFHTRCFY*PDPSCIP*TSSLDCI 436
+CR+ RC YC G RC + DPS ++ +C+
Sbjct: 45 LCRSTRCNQYCVSEGATRGRCGFSSDPSATALKNATECL 83
>08_01_0152 -
1190358-1190462,1190648-1190765,1191134-1192691,
1193338-1193530
Length = 657
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -2
Query: 333 QTSVQHADRRAVMR*RTHQRGSRWLRQHEQPEQVFPRYDAS*SHGYHQHVVC 178
+ SV + D+ ++ RT RGS L QPE + PRY+ H VC
Sbjct: 269 KNSVNNDDKPMLVSIRTKGRGSSTLPSIAQPEPL-PRYNKHWRRKAHSMCVC 319
>02_05_0888 - 32517876-32518087,32518320-32518694,32519551-32519638,
32520145-32520384,32521033-32521149,32521213-32521606,
32521752-32521998,32522086-32522315,32522768-32522823,
32522903-32523094,32523274-32523376,32523478-32523544,
32524312-32525154,32525547-32525670,32525965-32526213,
32526354-32526443,32526530-32526649,32526664-32526738,
32527001-32527147,32527255-32527365,32527446-32527667,
32527777-32527896,32527971-32528270,32528355-32528480,
32529246-32529360,32529556-32530019,32530119-32530253,
32530684-32530788,32530876-32531053,32531143-32531864
Length = 2188
Score = 28.3 bits (60), Expect = 8.6
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 10/85 (11%)
Frame = -1
Query: 631 EAHPRRXNTSRANNHHIKPIEWEDLVLH---GIAMSTNLSGESVLH-KA------ITGML 482
EAH + S H+K E LH G++ S NLS ++++ KA + +
Sbjct: 1311 EAHVKTRTRSSKRTAHMKG-EKASTELHCKNGLSCSDNLSTDTLVRGKANCILDGVDQSI 1369
Query: 481 TYEASVMG*WSCAGSNTIKRRGSRN 407
Y S+ G W+C NT+ +N
Sbjct: 1370 DYTCSIFGCWNCLFVNTLNSGSIQN 1394
>01_06_0902 +
32853708-32853739,32854787-32855596,32856094-32856157,
32856375-32856446
Length = 325
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 158 PDGDLCLQTTC*WYPCDQLASYLGKTCSGCSCCRSH 265
P +C+ T C C K CS CSC + H
Sbjct: 265 PQNSVCMVTLCTSEICSGRRYAAKKLCSACSCHKRH 300
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 28.3 bits (60), Expect = 8.6
Identities = 22/78 (28%), Positives = 27/78 (34%)
Frame = +2
Query: 104 CHQNACCNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSCCRSHREPR*C 283
CH C P GR+ P G + CD A+ G TC C H+ P C
Sbjct: 324 CHAGKCGGCPLQGRRT-CPCGKKDYPSL----DCDAEAATCGSTCEKVLGCGRHKCPERC 378
Query: 284 VRHLITALRSACCTEVCR 337
R T+ CR
Sbjct: 379 HRGSCVETCRLVITKSCR 396
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,452,676
Number of Sequences: 37544
Number of extensions: 567098
Number of successful extensions: 1326
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1326
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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