Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_L16
         (875 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23172-16|AAC46524.1|  757|Caenorhabditis elegans Hypothetical p...    29   4.4  
AF303255-1|AAG50213.1|  573|Caenorhabditis elegans putative guan...    28   7.6  
AC024817-8|AAU05551.1|  535|Caenorhabditis elegans Hypothetical ...    28   7.6  
AC024817-7|AAK68527.1|  573|Caenorhabditis elegans Hypothetical ...    28   7.6  

>U23172-16|AAC46524.1|  757|Caenorhabditis elegans Hypothetical
           protein F25B5.2 protein.
          Length = 757

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/53 (26%), Positives = 27/53 (50%)
 Frame = +2

Query: 251 VFEHVRSTAKKKHYADQNTSSGTPQERECSIRKSCNNVSVTSMEDLSHEEIVT 409
           +F  + ++A ++    ++   GTP  R   +     N+S  +MED+  EE +T
Sbjct: 208 LFRSLCNSAVRRVPTSKSEGGGTPMRRSMRMSIQKRNLSSKNMEDVPEEEALT 260


>AF303255-1|AAG50213.1|  573|Caenorhabditis elegans putative
           guanylate-binding protein protein.
          Length = 573

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -2

Query: 481 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIF 380
           C ++     M S+V++ N+SQN++ DD    Q+F
Sbjct: 171 CATIFALSTMISSVQIYNLSQNIQEDDLQHLQLF 204


>AC024817-8|AAU05551.1|  535|Caenorhabditis elegans Hypothetical
           protein Y54G2A.2b protein.
          Length = 535

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -2

Query: 481 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIF 380
           C ++     M S+V++ N+SQN++ DD    Q+F
Sbjct: 171 CATIFALSTMISSVQIYNLSQNIQEDDLQHLQLF 204


>AC024817-7|AAK68527.1|  573|Caenorhabditis elegans Hypothetical
           protein Y54G2A.2a protein.
          Length = 573

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -2

Query: 481 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIF 380
           C ++     M S+V++ N+SQN++ DD    Q+F
Sbjct: 171 CATIFALSTMISSVQIYNLSQNIQEDDLQHLQLF 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,663,199
Number of Sequences: 27780
Number of extensions: 344052
Number of successful extensions: 801
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)