Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_L14
         (853 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical pr...    42   7e-04
AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical ...    39   0.004
AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical ...    39   0.005
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    39   0.005
AL137227-6|CAB70236.2|  159|Caenorhabditis elegans Hypothetical ...    29   4.2  

>U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical
           protein F31A9.6 protein.
          Length = 358

 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 41/170 (24%), Positives = 74/170 (43%)
 Frame = +1

Query: 115 FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNITSS 294
           FADDT +Y S  K       LQ A+  +  W +  ++ +N +K              T  
Sbjct: 108 FADDTKLYASTPKTES-ENNLQSALDAVVDWTKGSKLTLNQSK--------------TVH 152

Query: 295 IPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRL 474
           + +  RR +        L G PI   +  + LG  +   + F  H +   + A F L  +
Sbjct: 153 VTVGKRRIDFK----YHLDGYPIERKAITRDLGFLISEKLDFSDHWRKCINLAKFQLANM 208

Query: 475 YPMLCSRSKLPLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQS 624
           +    + +K   +  + LYKT IRP + Y +VV +   ++  K+++ +Q+
Sbjct: 209 FNKYSTSNK---KLMILLYKTFIRPRLEYGTVVSSPTKKSDEKTIESVQN 255


>AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical
           protein K09H9.4 protein.
          Length = 328

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 25/93 (26%), Positives = 46/93 (49%)
 Frame = +1

Query: 346 LFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLPLRNKVT 525
           L G PI   +  + LG  +   + F  H K   + A F L  ++    + +K   +  + 
Sbjct: 136 LDGYPIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSNK---KLMIL 192

Query: 526 LYKTCIRPVMTYASVVFAHAARTHLKSLQVIQS 624
           LYKT IRP + Y +VV +   ++  K+++ +Q+
Sbjct: 193 LYKTFIRPRLEYGTVVSSPTKKSDEKAIESVQN 225


>AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical
           protein C44B12.7 protein.
          Length = 389

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 26/84 (30%), Positives = 41/84 (48%)
 Frame = +1

Query: 358 PIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLPLRNKVTLYKT 537
           PI   +  + LG+  D  +TF+PHIK +    +  L R   +L S   L       L+KT
Sbjct: 188 PISPSNIARDLGILTDSKLTFKPHIKKI---VSLALLRCKQLLKSFKSLCPEFYCNLFKT 244

Query: 538 CIRPVMTYASVVFAHAARTHLKSL 609
            I P++ Y S V++    + L +L
Sbjct: 245 YILPLIEYGSAVYSPKPSSSLSTL 268


>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
            protein F21E9.1 protein.
          Length = 1170

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 43/163 (26%), Positives = 71/163 (43%)
 Frame = +1

Query: 91   SPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRG 270
            +P  +++ FADD  I+++    +++   + I V+    W +   + + PTKSA       
Sbjct: 904  APTINISCFADDVKIFHT--DPTIIQNSIDIIVS----WSKLNELPLAPTKSAL------ 951

Query: 271  RPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDR 450
                    + L +R  N S     ++ G PI   S V+ LG+  D  + F  HI  V   
Sbjct: 952  --------LALGTRNKNQS----YSVDGVPITPSSTVRDLGLITDCKLKFEHHIVKVSCL 999

Query: 451  AAFILGRLYPMLCSRSKLPLRNKVTLYKTCIRPVMTYASVVFA 579
            A     ++     S S    +    LYKT + P+M Y S V+A
Sbjct: 1000 AMLRSKQILKAFSSNSP---KFYAHLYKTYVAPIMNYCSEVYA 1039


>AL137227-6|CAB70236.2|  159|Caenorhabditis elegans Hypothetical
           protein F58D5.5 protein.
          Length = 159

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +3

Query: 492 SKQTAPPQ*GNSLQNLHTPRHDVRKRSVRSRSPHPLEIPSGYSITNS 632
           S QT P   GN  Q    PRH  R+R  +S SP  L   +  S+ +S
Sbjct: 26  SHQTTPKSSGNPRQQQAQPRH--RQRKAQSSSPASLAAFASSSVCSS 70


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,076,922
Number of Sequences: 27780
Number of extensions: 390262
Number of successful extensions: 1120
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)