Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_L12
(890 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 52 7e-07
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 52 7e-07
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 48 1e-05
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 48 1e-05
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 48 1e-05
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 48 1e-05
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 48 1e-05
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 46 3e-05
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 46 3e-05
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 46 3e-05
U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of ... 45 6e-05
U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of ... 45 6e-05
U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of ... 45 6e-05
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 45 6e-05
AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gat... 45 6e-05
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 45 6e-05
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 45 6e-05
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 44 1e-04
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 44 1e-04
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 44 1e-04
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 44 2e-04
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 43 3e-04
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 42 4e-04
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 42 4e-04
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 42 4e-04
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 42 4e-04
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 42 4e-04
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 42 6e-04
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 42 6e-04
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 42 6e-04
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 42 6e-04
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 42 8e-04
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 42 8e-04
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 41 0.001
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 40 0.002
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 40 0.002
AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ... 39 0.004
AL110485-27|CAB60369.3| 515|Caenorhabditis elegans Hypothetical... 39 0.006
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical p... 38 0.007
AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic ace... 38 0.007
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 38 0.010
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 38 0.010
Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical pr... 38 0.013
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 38 0.013
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 38 0.013
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 38 0.013
Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 37 0.017
U40948-4|AAA81730.2| 517|Caenorhabditis elegans Hypothetical pr... 37 0.017
AY849796-1|AAW34234.1| 517|Caenorhabditis elegans acetylcholine... 37 0.017
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 37 0.017
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 37 0.022
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 37 0.022
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 37 0.022
AL132862-1|CAB60529.2| 434|Caenorhabditis elegans Hypothetical ... 37 0.022
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 37 0.022
Z82059-5|CAB04879.2| 408|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z68217-3|CAA92466.2| 466|Caenorhabditis elegans Hypothetical pr... 36 0.051
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 35 0.090
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 35 0.090
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 35 0.090
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 35 0.090
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 35 0.090
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 35 0.090
Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 34 0.12
U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 34 0.12
AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ... 34 0.12
AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine ... 34 0.12
AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine ... 34 0.12
Z82262-4|CAE17770.1| 679|Caenorhabditis elegans Hypothetical pr... 33 0.21
U64840-1|AAB04959.2| 484|Caenorhabditis elegans Glutamate-gated... 33 0.21
U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protei... 33 0.21
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 33 0.21
AJ243914-1|CAB51708.1| 484|Caenorhabditis elegans Glutamate-gat... 33 0.21
AC006816-3|AAK85510.3| 508|Caenorhabditis elegans Hypothetical ... 33 0.21
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 33 0.36
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 33 0.36
Z74040-6|CAA98509.2| 457|Caenorhabditis elegans Hypothetical pr... 32 0.48
AF040661-8|AAG24222.1| 327|Caenorhabditis elegans Hypothetical ... 32 0.48
AF022985-15|AAB69969.2| 435|Caenorhabditis elegans Hypothetical... 32 0.48
U97196-15|AAN60541.1| 239|Caenorhabditis elegans Altered averme... 32 0.63
U97196-14|AAK68665.2| 416|Caenorhabditis elegans Altered averme... 32 0.63
U97196-13|AAK68666.1| 430|Caenorhabditis elegans Altered averme... 32 0.63
U41113-1|AAC25482.1| 430|Caenorhabditis elegans inhibitory amin... 32 0.63
U40573-1|AAC25481.1| 416|Caenorhabditis elegans inhibitory amin... 32 0.63
AF003138-1|AAK21371.3| 469|Caenorhabditis elegans Hypothetical ... 32 0.63
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 31 0.84
U42836-1|ABC48243.1| 497|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z49888-6|CAD44128.1| 428|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z49888-5|CAA90065.2| 409|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z47069-5|CAD44131.1| 428|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z47069-4|CAA87339.2| 409|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical pr... 31 1.5
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 31 1.5
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 31 1.5
Z81509-9|CAB04158.3| 503|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81463-12|CAB03855.3| 503|Caenorhabditis elegans Hypothetical p... 30 1.9
Z81050-9|CAB02858.2| 400|Caenorhabditis elegans Hypothetical pr... 30 1.9
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 30 1.9
U28928-2|AAA68335.2| 329|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.4
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 3.4
Z46791-7|CAA86760.2| 473|Caenorhabditis elegans Hypothetical pr... 29 4.5
U40187-1|AAA81158.3| 459|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical ... 29 4.5
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 29 4.5
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 29 4.5
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 29 5.9
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 29 5.9
Z92812-8|CAB07275.1| 337|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 7.8
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 7.8
U59743-1|AAB03402.1| 155|Caenorhabditis elegans glutamate-gated... 28 7.8
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 7.8
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 7.8
AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical ... 28 7.8
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 28 7.8
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 51.6 bits (118), Expect = 7e-07
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 499
V S+R+W PD+VL N A + V ++G V+W+ + + ++ +P D
Sbjct: 137 VPSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTWVPPAMFKSSCRIDVEWFPFDE 196
Query: 500 QTCTFKFGSRMHNSDXM-----DFVIDXRXYXMFXSGXWDVTDL 616
Q CT FGS +NS+ + + + + + SG WDV D+
Sbjct: 197 QCCTLVFGSWTYNSEEVRLHWYNNIQAVQLHDYSYSGIWDVIDV 240
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 51.6 bits (118), Expect = 7e-07
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 499
V S+R+W PD+VL N A + V ++G V+W+ + + ++ +P D
Sbjct: 137 VPSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTWVPPAMFKSSCRIDVEWFPFDE 196
Query: 500 QTCTFKFGSRMHNSDXM-----DFVIDXRXYXMFXSGXWDVTDL 616
Q CT FGS +NS+ + + + + + SG WDV D+
Sbjct: 197 QCCTLVFGSWTYNSEEVRLHWYNNIQAVQLHDYSYSGIWDVIDV 240
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Frame = +2
Query: 338 LWRPDVVLLNAAATTAGD-YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 514
+W+PDV+L N+ + + A V G+V+WI I + ++ + +P D Q CT
Sbjct: 106 IWKPDVLLYNSVDQQFDSTWPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYFPFDTQHCTM 165
Query: 515 KFGSRMHN---SDXMDFVIDXRXYXMFXSGXWDVTDLSS 622
KFGS ++ +D ++ I Y +G W++ L+S
Sbjct: 166 KFGSWTYSGFFTDLINTTISPATYK--PNGEWELLGLTS 202
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 499
VS +++W PD+VL N A + +++ G + W+ + + ++ +P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 500 QTCTFKFGSRMHNSD--XMDFV----IDXRXYXMFXSGXWDVTDLSSAV 628
Q CT FGS +N + ++FV +D Y S WDV D+ +++
Sbjct: 167 QVCTLVFGSWTYNENEIKLEFVQAELVDVSEYS--ASSIWDVIDVPASL 213
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 499
VS +++W PD+VL N A + +++ G + W+ + + ++ +P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 500 QTCTFKFGSRMHNSD--XMDFV----IDXRXYXMFXSGXWDVTDLSSAV 628
Q CT FGS +N + ++FV +D Y S WDV D+ +++
Sbjct: 167 QVCTLVFGSWTYNENEIKLEFVQAELVDVSEYS--ASSIWDVIDVPASL 213
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 499
VS +++W PD+VL N A + +++ G + W+ + + ++ +P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 500 QTCTFKFGSRMHNSD--XMDFV----IDXRXYXMFXSGXWDVTDLSSAV 628
Q CT FGS +N + ++FV +D Y S WDV D+ +++
Sbjct: 167 QVCTLVFGSWTYNENEIKLEFVQAELVDVSEYS--ASSIWDVIDVPASL 213
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Frame = +2
Query: 338 LWRPDVVLLNAAATTAGD-YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 514
+W+PDV+L N+ + + A V G+V+WI I + ++ + +P D Q CT
Sbjct: 106 IWKPDVLLYNSVDQQFDSTWPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYFPFDTQHCTM 165
Query: 515 KFGSRMHN---SDXMDFVIDXRXYXMFXSGXWDVTDLSS 622
KFGS ++ +D ++ I Y +G W++ L+S
Sbjct: 166 KFGSWTYSGFFTDLINTTISPATYK--PNGEWELLGLTS 202
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 46.4 bits (105), Expect = 3e-05
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 499
V+ E++W PD+VL N A + + + G+V W+ + + ++ +P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 500 QTCTFKFGSRMHNSD--XMDFVIDXR--XYXMFXSGXWDVTD 613
Q C+ FGS +N D +DF+ R S WD+ D
Sbjct: 175 QLCSLTFGSWTYNRDEIKLDFLTSDRVDFSEYSTSSIWDMMD 216
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 46.4 bits (105), Expect = 3e-05
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 499
V+ E++W PD+VL N A + + + G+V W+ + + ++ +P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 500 QTCTFKFGSRMHNSD--XMDFVIDXR--XYXMFXSGXWDVTD 613
Q C+ FGS +N D +DF+ R S WD+ D
Sbjct: 175 QLCSLTFGSWTYNRDEIKLDFLTSDRVDFSEYSTSSIWDMMD 216
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 46.4 bits (105), Expect = 3e-05
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 499
V+ E++W PD+VL N A + + + G+V W+ + + ++ +P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 500 QTCTFKFGSRMHNSD--XMDFVIDXR--XYXMFXSGXWDVTD 613
Q C+ FGS +N D +DF+ R S WD+ D
Sbjct: 175 QLCSLTFGSWTYNRDEIKLDFLTSDRVDFSEYSTSSIWDMMD 216
>U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform c protein.
Length = 442
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Frame = +2
Query: 335 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIK-RLDISTPISMQLDNWPNDMQ 502
++W P+ ++N+ TT + + + NG+V WI RL + +P ++ L +P D Q
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTV-WINHRLSVKSPCNLDLRQFPFDTQ 171
Query: 503 TCTFKFGSRMHNSDXMD 553
TC F S HNS+ ++
Sbjct: 172 TCILIFESYSHNSEEVE 188
>U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform a protein.
Length = 489
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Frame = +2
Query: 335 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIK-RLDISTPISMQLDNWPNDMQ 502
++W P+ ++N+ TT + + + NG+V WI RL + +P ++ L +P D Q
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTV-WINHRLSVKSPCNLDLRQFPFDTQ 171
Query: 503 TCTFKFGSRMHNSDXMD 553
TC F S HNS+ ++
Sbjct: 172 TCILIFESYSHNSEEVE 188
>U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform b protein.
Length = 475
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Frame = +2
Query: 335 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIK-RLDISTPISMQLDNWPNDMQ 502
++W P+ ++N+ TT + + + NG+V WI RL + +P ++ L +P D Q
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTV-WINHRLSVKSPCNLDLRQFPFDTQ 171
Query: 503 TCTFKFGSRMHNSDXMD 553
TC F S HNS+ ++
Sbjct: 172 TCILIFESYSHNSEEVE 188
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 335 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 511
++WRPD++L N+A+ + V N G V+WI M + +P D Q C
Sbjct: 48 QIWRPDILLYNSASEDFDSSFKSNEVVYNTGEVNWIPPGIFRASCKMDITYFPFDDQVCY 107
Query: 512 FKFGSRMHNSDXMDFVI 562
KFGS ++ +D I
Sbjct: 108 LKFGSWTYHGLALDLSI 124
>AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gated
chloride channel protein.
Length = 489
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Frame = +2
Query: 335 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIK-RLDISTPISMQLDNWPNDMQ 502
++W P+ ++N+ TT + + + NG+V WI RL + +P ++ L +P D Q
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTV-WINHRLSVKSPCNLDLRQFPFDTQ 171
Query: 503 TCTFKFGSRMHNSDXMD 553
TC F S HNS+ ++
Sbjct: 172 TCILIFESYSHNSEEVE 188
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 45.2 bits (102), Expect = 6e-05
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +2
Query: 305 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 472
G V S+ +W PDVVL N A G+Y + +A+++ NG+V W + +
Sbjct: 97 GVEVLYVPSDTIWLPDVVLYNNAD---GNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQI 153
Query: 473 QLDNWPNDMQTCTFKFGS 526
++ +P D Q C KFGS
Sbjct: 154 DVEFFPFDRQQCEMKFGS 171
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 45.2 bits (102), Expect = 6e-05
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +2
Query: 305 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 472
G V S+ +W PDVVL N A G+Y + +A+++ NG+V W + +
Sbjct: 97 GVEVLYVPSDTIWLPDVVLYNNAD---GNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQI 153
Query: 473 QLDNWPNDMQTCTFKFGS 526
++ +P D Q C KFGS
Sbjct: 154 DVEFFPFDRQQCEMKFGS 171
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 44.4 bits (100), Expect = 1e-04
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Frame = +2
Query: 299 EW-GCSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNNG--SVSWIKRLDISTPIS 469
EW G ++ ++W PD + N T ARV +G V + K +D++ P+S
Sbjct: 103 EWNGIERIIIPKSQIWIPDGYIFNTVEETEPLENHNARVRYDGRVEVDFNKLVDLTCPMS 162
Query: 470 MQLDNWPNDMQTCTFKFGSRMHNSDXMDF-VIDXRXYXMFXSGXWDVTDLSS 622
+ ++P D+Q C +FGS + + + F V+D + WD+ ++
Sbjct: 163 VL--SFPFDVQLCALQFGSWSYQAHAISFNVLDTFVPKKSKNSEWDIVSFNA 212
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 44.4 bits (100), Expect = 1e-04
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Frame = +2
Query: 299 EW-GCSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNNG--SVSWIKRLDISTPIS 469
EW G ++ ++W PD + N T ARV +G V + K +D++ P+S
Sbjct: 103 EWNGIERIIIPKSQIWIPDGYIFNTVEETEPLENHNARVRYDGRVEVDFNKLVDLTCPMS 162
Query: 470 MQLDNWPNDMQTCTFKFGSRMHNSDXMDF-VIDXRXYXMFXSGXWDVTDLSS 622
+ ++P D+Q C +FGS + + + F V+D + WD+ ++
Sbjct: 163 VL--SFPFDVQLCALQFGSWSYQAHAISFNVLDTFVPKKSKNSEWDIVSFNA 212
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +2
Query: 326 SSERLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 502
+S +LWRPDV+L N+ + + Y+ R VS+NG V + + +P D Q
Sbjct: 103 ASFKLWRPDVLLFNSVSESFDSTYSSRFIVSSNGDVQQNPPGIFRFVCQIDVTYYPFDKQ 162
Query: 503 TCTFKFGSRMHNSD--XMDFVI 562
TC K GS +N +DF++
Sbjct: 163 TCFLKLGSWTYNGQYINLDFLL 184
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 326 SSERLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 502
SS+ +W+PDV+L N+AA + + G+V WI + + + +P D Q
Sbjct: 105 SSDHIWKPDVLLYNSAAEDFDSTFKSNLLTYHTGTVVWIPPGVLKFVCQLDVTWFPFDDQ 164
Query: 503 TCTFKFGSRMHNSDXMDFVID 565
C KFGS + +D ID
Sbjct: 165 VCEMKFGSWTFHGYAIDLQID 185
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +2
Query: 299 EWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISM 472
E+G T L + LW+PD++L N+A + + VS+NG V + +S S+
Sbjct: 92 EYGNITTLQIPHGTLWKPDILLFNSANEHFDASFPVHMVVSSNGDVLFAPPGIVSFSCSL 151
Query: 473 QLDNWPNDMQTCTFKFGSRMHNSDXMDFVID 565
+ +P D Q C KFGS + +D ID
Sbjct: 152 SMTWFPYDQQVCYLKFGSWTYGK-KLDLQID 181
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 299 EWGCSTWL-VSSERLWRPDVVLLNAAATTAG-DYALRARVSNNGSVSWIKRLDISTPISM 472
+WG ++ + S+++W PD+VL N A A++ ++G V W + +
Sbjct: 96 DWGGVEYIHIPSDQIWIPDIVLYNNADGEPHITITSLAKIDHHGRVVWQPPSIYKSFCPI 155
Query: 473 QLDNWPNDMQTCTFKFGSRMHNSDXMD 553
+ +P D QTC KFG ++ + +D
Sbjct: 156 NIKYFPYDWQTCEMKFGGWSNDGETLD 182
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +2
Query: 299 EWGCSTWLVSSERLWRPDVVLLNAAATT-AGDYALRARVSN-NGSVSWIKRLDISTPISM 472
+WG S ++W P++V +N +T+ G + +N G + +TP
Sbjct: 126 QWGLSWLNFYWIQIWTPNIVQINGGSTSNPGQVTSKVLAANYTGQIYLWSDFSFTTPFRF 185
Query: 473 QLDNWPNDMQTCTFKFGSR 529
Q +++PNDMQ +KF +
Sbjct: 186 QYEDYPNDMQRVCYKFDDK 204
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/79 (18%), Positives = 31/79 (39%)
Frame = +1
Query: 82 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRGSESTVRILADLQM 261
S C+ + + TY + +K+V ++ + + I V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 262 NWIDKRLSWNAGGMGLQHL 318
+W D +SW+ GL L
Sbjct: 114 SWNDTMVSWDKEQWGLSWL 132
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 335 RLWRPDVVLLNAAATTAGD-YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 511
++W+PDV+L N+ T Y V + G V W+ + + +P D Q C
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCF 162
Query: 512 FKFGSRMHNSDXMD 553
FKFGS ++ +D
Sbjct: 163 FKFGSWTYDGYKLD 176
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 335 RLWRPDVVLLNAAATTAGD-YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 511
++W+PDV+L N+ T Y V + G V W+ + + +P D Q C
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCF 162
Query: 512 FKFGSRMHNSDXMD 553
FKFGS ++ +D
Sbjct: 163 FKFGSWTYDGYKLD 176
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 335 RLWRPDVVLLNAAATTAGD-YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 511
++W+PDV+L N+ T Y V + G V W+ + + +P D Q C
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCF 162
Query: 512 FKFGSRMHNSDXMD 553
FKFGS ++ +D
Sbjct: 163 FKFGSWTYDGYKLD 176
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 335 RLWRPDVVLLNAAATTAGD-YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 511
++W+PDV+L N+ T Y V + G V W+ + + +P D Q C
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCF 162
Query: 512 FKFGSRMHNSDXMD 553
FKFGS ++ +D
Sbjct: 163 FKFGSWTYDGYKLD 176
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Frame = +2
Query: 335 RLWRPDVVLLNAAATTAGD-YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 511
+LW PDV++ N+A YA V NG V+W+ +Q+ +P D+Q C
Sbjct: 106 QLWTPDVLMYNSADPQFDSRYASNLLVYPNGLVNWMPPGLYRLSCKIQVVWFPFDVQECF 165
Query: 512 FKFGSRMHNSDXMDFVIDXRXYXM---FXSGXW 601
KFGS + ++ ID + + +G W
Sbjct: 166 LKFGSWTFDGTKLNLEIDDNGFDISNYMQNGEW 198
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 41.9 bits (94), Expect = 6e-04
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Frame = +2
Query: 305 GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLD 481
G T V +++W PD+VL N A + V + G + W+ + + ++
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNADGNYLVSFYSNVVVEHTGDMLWVPPAVYKSSCLIDVE 156
Query: 482 NWPNDMQTCTFKFGSRMHNSD--XMDFVIDXRXYXM---FXSGXWDVTD 613
+P D Q C+ FGS D + ++ R + SG WD+ D
Sbjct: 157 FFPFDEQVCSLTFGSWTFRKDELQLSYLSGKRHVELNDYLPSGVWDLID 205
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 41.9 bits (94), Expect = 6e-04
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +2
Query: 329 SERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIK-RLDISTPISMQLDNWPND 496
SERLW P+V +N+ +T + + NG+V W+ R+ +S P S +L +P D
Sbjct: 112 SERLWTPNVCFVNSKSTQVHKSPASNILLIIYPNGTV-WLNYRVQVSAPCSFELSRFPID 170
Query: 497 MQTCTFKFGSRMHN 538
Q C F S +N
Sbjct: 171 AQECHLVFESYSYN 184
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 41.9 bits (94), Expect = 6e-04
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Frame = +2
Query: 305 GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLD 481
G T V +++W PD+VL N A + V + G + W+ + + ++
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNADGNYLVSFYSNVVVEHTGDMLWVPPAVYKSSCLIDVE 156
Query: 482 NWPNDMQTCTFKFGSRMHNSD--XMDFVIDXRXYXM---FXSGXWDVTD 613
+P D Q C+ FGS D + ++ R + SG WD+ D
Sbjct: 157 FFPFDEQVCSLTFGSWTFRKDELQLSYLSGKRHVELNDYLPSGVWDLID 205
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +2
Query: 317 WL-VSSERLWRPDVVLLNAA-ATTAGDYALR-ARVSNNGSVSWIKRLDISTPISMQLDNW 487
W+ +S+ R W PDV+ N D ++ A + NG + + +S+P +++DN+
Sbjct: 100 WIKISASRAWIPDVIFTNGIDMDPLLDKDMQMADLRYNGEIRTSRPAVVSSPCPLEIDNF 159
Query: 488 PNDMQTCTFKFGS 526
P D+Q C GS
Sbjct: 160 PYDVQKCNISMGS 172
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 41.5 bits (93), Expect = 8e-04
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +2
Query: 296 GEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYALR-ARVSNNGSVSWIKRLDISTPIS 469
G WG L V +++W PD++L N A + A V NG V W + S
Sbjct: 91 GRWGKIRKLHVPVDQIWIPDILLYNNADGEPHITIMSDAIVYYNGLVVWKPPSIYKSFCS 150
Query: 470 MQLDNWPNDMQTCTFKFGSRMHNSDXMD 553
+ ++ +P D QTC KFG +N +D
Sbjct: 151 IDIEYFPYDTQTCWMKFGGWTYNGFLLD 178
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAG-DYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 508
E LW PD++L N A + + VS G V+W + ++ ++ +P D+Q C
Sbjct: 85 EMLWLPDIILYNNAHGSPWVSETTQVHVSFEGRVTWQPPVVYDAFCNIDIEWYPYDLQIC 144
Query: 509 TFKFGSRMHNSDXMDFV 559
KFGS + ++ +
Sbjct: 145 ELKFGSWTYGGSQLNLI 161
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +2
Query: 335 RLWRPDVVLLNAAATT--AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 508
R+W+PD++L+N A A + V+++G+V+W+ + +++ +P D Q C
Sbjct: 193 RIWKPDIILVNNAIREYYASLVSTDVMVTSDGNVTWLFSALFRSSCPIRVRYYPFDDQQC 252
Query: 509 TFKFGSRMHN 538
KF S H+
Sbjct: 253 DLKFASWSHD 262
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 508
+ LW PD++L N+ + Y + + G+++W+ + + +P D Q C
Sbjct: 101 DALWTPDILLYNSVDSEFDSSYKVNLVNYHTGNINWMPPGIFKVSCKLDIYWFPFDEQVC 160
Query: 509 TFKFGSRMHNSDXMDFVIDXRXYXMF-XSGXWDVTD 613
FKFGS + D + + F +G W + D
Sbjct: 161 YFKFGSWTYTRDKIQLEKGDFDFSEFIPNGEWIIID 196
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +1
Query: 121 MIDSLLATYDRESPP--DSK--IVVNLTLHLRHA-NIRGSESTVRILADLQMNWIDKRLS 285
+I+ L++ Y RE P DS +VV+L + L+ N+ E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 286 W 288
W
Sbjct: 85 W 85
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/82 (21%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTAGDYALRARVSNN--GSVSWIKRLDISTPISMQLDNWPND 496
+ S+++W+PD++L N A + V + G++ W ++ + + ++P D
Sbjct: 76 IPSDKIWKPDIILYNNADAQYMKSVMSTDVIVDYLGNIHWPLSAIFTSSCPLDVKHYPFD 135
Query: 497 MQTCTFKFGSRMHNSDXMDFVI 562
QTC K+ S ++ +D ++
Sbjct: 136 RQTCILKYASWAYDGTKIDLLL 157
>AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ion
channel protein 12 protein.
Length = 425
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +2
Query: 299 EW-GCSTWLVSSERLWRPDVVLLNAA--ATTAGDYALRARVSNNGSVSWIKRLDISTPIS 469
EW G + +W PD + N T ++ +R + V + K +D+ P+S
Sbjct: 96 EWDGIEKITIPKSMVWLPDGYIFNTVEETDTLDNHNVRVHYNGKVEVDFNKLIDLICPMS 155
Query: 470 MQLDNWPNDMQTCTFKFGSRMHNSDXMDF 556
+ ++P D+Q C +FGS + S + F
Sbjct: 156 VL--SFPFDVQLCALQFGSWTYQSHALSF 182
>AL110485-27|CAB60369.3| 515|Caenorhabditis elegans Hypothetical
protein Y46G5A.26a protein.
Length = 515
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Frame = +2
Query: 329 SERLWRPDVVLLNAAATT-----AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 493
S LW PD + NA ++ + + R+ NNGS+ + +RL + M L +P
Sbjct: 154 SNYLWHPDTFVPNAISSKNPRRQSITHRSLLRLRNNGSILYSRRLSLILTCGMDLTLFPF 213
Query: 494 DMQTCTFKFGSRMHNSDXMDFV 559
D Q C F S + +D + ++
Sbjct: 214 DTQLCKMGFESYGYTADKVKYL 235
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 326 SSERLWRPDVVLLNAAATTAGD-YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 502
++ +W+PDV+L N+A Y + VS G V + + + + +P D Q
Sbjct: 107 NANAIWKPDVLLYNSADENFDSTYPVNYVVSYTGDVLQVPPGILKLSCKIDITYFPFDDQ 166
Query: 503 TCTFKFGSRMHNSDXMDFVID 565
C KFGS ++ + +D I+
Sbjct: 167 ICHLKFGSWTYSGNFIDLRIN 187
>Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical
protein T09A5.3 protein.
Length = 538
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGD-----YALRARVSNNGSVSWIKRLDISTPISMQLDNWPND 496
+++W+PD++L N + Y A ++G ++WI M + +P D
Sbjct: 111 DQIWQPDILLYNRYIEDEQESFDITYKTNAVAYSDGVINWIPPGIFKLSCKMDITLFPFD 170
Query: 497 MQTCTFKFGSRMHNSDXMDFVID 565
Q C KFGS ++ +D +D
Sbjct: 171 EQICFMKFGSWTYHGFALDLRLD 193
>AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-7 protein.
Length = 538
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGD-----YALRARVSNNGSVSWIKRLDISTPISMQLDNWPND 496
+++W+PD++L N + Y A ++G ++WI M + +P D
Sbjct: 111 DQIWQPDILLYNRYIEDEQESFDITYKTNAVAYSDGVINWIPPGIFKLSCKMDITLFPFD 170
Query: 497 MQTCTFKFGSRMHNSDXMDFVID 565
Q C KFGS ++ +D +D
Sbjct: 171 EQICFMKFGSWTYHGFALDLRLD 193
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 37.9 bits (84), Expect = 0.010
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 305 GCSTWLVSSERLWRPDVVLLNAAATTAGDYALR-ARVSNNGSVSWIKRLDISTPISMQLD 481
G T + S+ +W PD+VL N AA L A V+ G+V W + + +
Sbjct: 108 GLKTLHIPSDFIWTPDLVLYNNAAGDPDITILTDALVTFEGNVYWQPPAIYKSFCPIDVT 167
Query: 482 NWPNDMQTCTFKFGSRMHNSDXMD 553
+P D Q C KFG+ + +D
Sbjct: 168 WFPYDSQKCEMKFGTWTYTGRYVD 191
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 37.9 bits (84), Expect = 0.010
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 305 GCSTWLVSSERLWRPDVVLLNAAATTAGDYALR-ARVSNNGSVSWIKRLDISTPISMQLD 481
G T + S+ +W PD+VL N AA L A V+ G+V W + + +
Sbjct: 108 GLKTLHIPSDFIWTPDLVLYNNAAGDPDITILTDALVTFEGNVYWQPPAIYKSFCPIDVT 167
Query: 482 NWPNDMQTCTFKFGSRMHNSDXMD 553
+P D Q C KFG+ + +D
Sbjct: 168 WFPYDSQKCEMKFGTWTYTGRYVD 191
>Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical
protein C53D6.3 protein.
Length = 445
Score = 37.5 bits (83), Expect = 0.013
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYALRA---RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 502
+RLW P+ +N+ + R+ + NG+V R+ + P S+ L N+P D+Q
Sbjct: 130 DRLWTPNSCFINSKVAQIHNSPFRSVFLMLFPNGTVMVNYRVRVKGPCSLDLSNFPLDLQ 189
Query: 503 TCTFKFGSRMHNSDXMD 553
C+ + S +N ++
Sbjct: 190 KCSLIYESFNYNRQEVE 206
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 305 GCSTWLVSSERLWRPDVVLLNAAATTAG-DYALRARVSNNGSVSWIKRLDISTPISMQLD 481
G + V E +W PD+VL N A + + +A + G V+W + + +
Sbjct: 97 GVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTWEPPAIFKSMCQIDVR 156
Query: 482 NWPNDMQTCTFKFGS 526
+P D Q C KFGS
Sbjct: 157 WFPFDEQQCHLKFGS 171
Score = 31.5 bits (68), Expect = 0.84
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Frame = +1
Query: 52 YRFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NI 216
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 217 RGSESTVRILADLQMNWIDKRLSW---NAGGMGLQHL 318
+ + L+ WID++LSW N GG+ + ++
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYV 103
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 305 GCSTWLVSSERLWRPDVVLLNAAATTAG-DYALRARVSNNGSVSWIKRLDISTPISMQLD 481
G + V E +W PD+VL N A + + +A + G V+W + + +
Sbjct: 97 GVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTWEPPAIFKSMCQIDVR 156
Query: 482 NWPNDMQTCTFKFGS 526
+P D Q C KFGS
Sbjct: 157 WFPFDEQQCHLKFGS 171
Score = 31.5 bits (68), Expect = 0.84
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Frame = +1
Query: 52 YRFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NI 216
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 217 RGSESTVRILADLQMNWIDKRLSW---NAGGMGLQHL 318
+ + L+ WID++LSW N GG+ + ++
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYV 103
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 305 GCSTWLVSSERLWRPDVVLLNAAATTAG-DYALRARVSNNGSVSWIKRLDISTPISMQLD 481
G + V E +W PD+VL N A + + +A + G V+W + + +
Sbjct: 97 GVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTWEPPAIFKSMCQIDVR 156
Query: 482 NWPNDMQTCTFKFGS 526
+P D Q C KFGS
Sbjct: 157 WFPFDEQQCHLKFGS 171
Score = 31.5 bits (68), Expect = 0.84
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Frame = +1
Query: 52 YRFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NI 216
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 217 RGSESTVRILADLQMNWIDKRLSW---NAGGMGLQHL 318
+ + L+ WID++LSW N GG+ + ++
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYV 103
>Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical
protein ZC482.1 protein.
Length = 550
Score = 37.1 bits (82), Expect = 0.017
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +2
Query: 329 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 499
S+ +W PD L N + + R R++ +G V++ RL + SM L N+P D
Sbjct: 132 SQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRNFPLDS 191
Query: 500 QTCTFKFGS 526
Q CT + S
Sbjct: 192 QNCTVEIES 200
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 37.1 bits (82), Expect = 0.017
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWIKRLDISTPISMQLDNWPND 496
V + ++W+PDV++ N A + + A V N G V + + ++ L +P D
Sbjct: 106 VPAHKIWKPDVLVYNNANMNVEENEMETNAIVDNTGRVMLFRSMITDISCNLNLQQFPFD 165
Query: 497 MQTCTFKFGSRMHNSDXMD 553
Q C F S + +D
Sbjct: 166 QQICFVTFASWSMDGSKLD 184
>U40948-4|AAA81730.2| 517|Caenorhabditis elegans Hypothetical
protein F55D10.5 protein.
Length = 517
Score = 37.1 bits (82), Expect = 0.017
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIK-RLDISTPISMQLDNWPNDM 499
+++W+P+ V +N+ + + + NG+V W+ R+ + P SM +P D
Sbjct: 144 DQIWKPNTVFINSKSANIHKSPFKNVFLMIYPNGTV-WVNYRVQVKGPCSMDFSAFPMDQ 202
Query: 500 QTCTFKFGSRMHNSDXMD 553
Q+C S +N+ +D
Sbjct: 203 QSCHLTLESFSYNNQEVD 220
>AY849796-1|AAW34234.1| 517|Caenorhabditis elegans
acetylcholine-gated chloride channelsubunit ACC-3
protein.
Length = 517
Score = 37.1 bits (82), Expect = 0.017
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIK-RLDISTPISMQLDNWPNDM 499
+++W+P+ V +N+ + + + NG+V W+ R+ + P SM +P D
Sbjct: 144 DQIWKPNTVFINSKSANIHKSPFKNVFLMIYPNGTV-WVNYRVQVKGPCSMDFSAFPMDQ 202
Query: 500 QTCTFKFGSRMHNSDXMD 553
Q+C S +N+ +D
Sbjct: 203 QSCHLTLESFSYNNQEVD 220
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 37.1 bits (82), Expect = 0.017
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWIKRLDISTPISMQLDNWPND 496
V + ++W+PDV++ N A + + A V N G V + + ++ L +P D
Sbjct: 106 VPAHKIWKPDVLVYNNANMNVEENEMETNAIVDNTGRVMLFRSMITDISCNLNLQQFPFD 165
Query: 497 MQTCTFKFGSRMHNSDXMD 553
Q C F S + +D
Sbjct: 166 QQICFVTFASWSMDGSKLD 184
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 36.7 bits (81), Expect = 0.022
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWIKRLDISTPISMQLDNWPND 496
V SE +W+PD+++ N A + ++ ++ + G +S + + +Q++ +P D
Sbjct: 101 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 160
Query: 497 MQTCTFKFGS 526
Q C S
Sbjct: 161 QQICFIMLAS 170
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 36.7 bits (81), Expect = 0.022
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWIKRLDISTPISMQLDNWPND 496
V SE +W+PD+++ N A + ++ ++ + G +S + + +Q++ +P D
Sbjct: 101 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 160
Query: 497 MQTCTFKFGS 526
Q C S
Sbjct: 161 QQICFIMLAS 170
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 36.7 bits (81), Expect = 0.022
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWIKRLDISTPISMQLDNWPND 496
V SE +W+PD+++ N A + ++ ++ + G +S + + +Q++ +P D
Sbjct: 85 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 144
Query: 497 MQTCTFKFGS 526
Q C S
Sbjct: 145 QQICFIMLAS 154
>AL132862-1|CAB60529.2| 434|Caenorhabditis elegans Hypothetical
protein Y73F8A.2 protein.
Length = 434
Score = 36.7 bits (81), Expect = 0.022
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = +2
Query: 335 RLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIK-RLDISTPISMQLDNWPNDMQ 502
+LW P+V ++N+ +T D + + NG++ W+ R+ P M L N+P D
Sbjct: 135 KLWSPNVCIVNSKSTKVHDSPKPNILLMIFPNGTI-WLNYRIRSEAPCQMNLRNFPLDSI 193
Query: 503 TCTFKFGSRMHNS 541
C+ F S +N+
Sbjct: 194 RCSLVFESYSYNA 206
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 36.7 bits (81), Expect = 0.022
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = +2
Query: 311 STWLVSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSWIKRLDISTPISMQLD 481
ST ++S +LW+P + L N+A + L A V N G V W R S ++ Q D
Sbjct: 98 STLSIASSKLWQPALQLYNSARGNSWSLYLTGLPAIVYNTGKV-W-SRGTFSFFVTCQFD 155
Query: 482 --NWPNDMQTC 508
NWP D Q+C
Sbjct: 156 FTNWPYDQQSC 166
>Z82059-5|CAB04879.2| 408|Caenorhabditis elegans Hypothetical
protein T27E9.9 protein.
Length = 408
Score = 35.9 bits (79), Expect = 0.039
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 335 RLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 505
++W P +N+ + + ++ +NGS+ R+ ++ P S L +P D Q
Sbjct: 132 KIWNPHACFVNSKLANIHESPFKNIFLQIYSNGSIWHNYRIKLTGPCSSTLRTFPIDQQR 191
Query: 506 CTFKFGSRMHNSD 544
C + S HN+D
Sbjct: 192 CMLFYESFTHNTD 204
>Z68217-3|CAA92466.2| 466|Caenorhabditis elegans Hypothetical
protein F58G6.4 protein.
Length = 466
Score = 35.5 bits (78), Expect = 0.051
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 502
+RLW P+ +N+ + + + V +NG++ R+ ++ P M+L +P D Q
Sbjct: 111 QRLWLPNTCFINSKSAAIHESPFKNVFLMVFSNGTLWTNYRMKLTGPCDMKLKRFPFDKQ 170
Query: 503 TCTFKFGSRMHNS 541
C F S +N+
Sbjct: 171 KCYLTFESFNYNT 183
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 34.7 bits (76), Expect = 0.090
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 121 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRGSESTVRILADLQMNWIDKRLSWNAG 297
+ + LL+ ++ +PPD + V L L H I + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 298 GMG 306
G
Sbjct: 130 LFG 132
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 34.7 bits (76), Expect = 0.090
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 121 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRGSESTVRILADLQMNWIDKRLSWNAG 297
+ + LL+ ++ +PPD + V L L H I + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 298 GMG 306
G
Sbjct: 130 LFG 132
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 314 TWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWIKRLDISTPISMQLDNW 487
TW + +++W PD+++ N A A+R AR+ NG++ + + + ++
Sbjct: 137 TW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTIVASHPAVHTVSCEINIRHF 195
Query: 488 PNDMQTCTFKFGS 526
P D Q C + S
Sbjct: 196 PLDDQRCAIEIAS 208
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 34.7 bits (76), Expect = 0.090
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 121 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRGSESTVRILADLQMNWIDKRLSWNAG 297
+ + LL+ ++ +PPD + V L L H I + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 298 GMG 306
G
Sbjct: 130 LFG 132
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 34.7 bits (76), Expect = 0.090
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 121 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRGSESTVRILADLQMNWIDKRLSWNAG 297
+ + LL+ ++ +PPD + V L L H I + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 298 GMG 306
G
Sbjct: 130 LFG 132
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 314 TWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWIKRLDISTPISMQLDNW 487
TW + +++W PD+++ N A A+R AR+ NG++ + + + ++
Sbjct: 137 TW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTIVASHPAVHTVSCEINIRHF 195
Query: 488 PNDMQTCTFKFGS 526
P D Q C + S
Sbjct: 196 PLDDQRCAIEIAS 208
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 34.7 bits (76), Expect = 0.090
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 121 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRGSESTVRILADLQMNWIDKRLSWNAG 297
+ + LL+ ++ +PPD + V L L H I + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 298 GMG 306
G
Sbjct: 130 LFG 132
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 34.7 bits (76), Expect = 0.090
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 121 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRGSESTVRILADLQMNWIDKRLSWNAG 297
+ + LL+ ++ +PPD + V L L H I + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 298 GMG 306
G
Sbjct: 130 LFG 132
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 314 TWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWIKRLDISTPISMQLDNW 487
TW + +++W PD+++ N A A+R AR+ NG++ + + + ++
Sbjct: 137 TW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTIVASHPAVHTVSCEINIRHF 195
Query: 488 PNDMQTCTFKFGS 526
P D Q C + S
Sbjct: 196 PLDDQRCAIEIAS 208
>Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical
protein F11A5.10 protein.
Length = 461
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +2
Query: 320 LVSSERLWRPDVVLLN---AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWP 490
L ++W PD N A T + R+ N+G+V + R+ + M L +P
Sbjct: 140 LTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYP 199
Query: 491 NDMQTCTFKFGSRMHNSDXMDFV 559
D+Q C+ S + + ++++
Sbjct: 200 MDVQQCSIDLASYAYTTKDIEYL 222
>U14524-1|AAA50785.1| 461|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl alpha protein.
Length = 461
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +2
Query: 320 LVSSERLWRPDVVLLN---AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWP 490
L ++W PD N A T + R+ N+G+V + R+ + M L +P
Sbjct: 140 LTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYP 199
Query: 491 NDMQTCTFKFGSRMHNSDXMDFV 559
D+Q C+ S + + ++++
Sbjct: 200 MDVQQCSIDLASYAYTTKDIEYL 222
>AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ion
channel protein 5 protein.
Length = 340
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 317 WL-VSSERLWRPDVVLLNAAATTA--GDYALRARVSNNGSVSWIKRLDISTPISMQLDNW 487
W+ +S R+W PDV+ + + + A + NG + +ST + + ++
Sbjct: 100 WIKISVSRVWVPDVIFTKRLSVESLLDEDMQMADLRYNGEIRTSLPAVVSTSCPLNIQDF 159
Query: 488 PNDMQTCTFKFGS 526
P+D+Q C GS
Sbjct: 160 PHDVQECNISMGS 172
>AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform b protein.
Length = 513
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +2
Query: 335 RLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 505
++W+PDV NA + + +GS+ + R+ + ++ L+ WP D Q
Sbjct: 110 KMWKPDVYFANARIAEFHEVTQPNFLVWIQPDGSILYDTRISMVVVCTLNLEKWPLDSQR 169
Query: 506 CTFKFGSRMHNSDXM 550
C + S + ++ +
Sbjct: 170 CHLRILSYAYTTEQL 184
>AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform a protein.
Length = 546
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +2
Query: 335 RLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 505
++W+PDV NA + + +GS+ + R+ + ++ L+ WP D Q
Sbjct: 110 KMWKPDVYFANARIAEFHEVTQPNFLVWIQPDGSILYDTRISMVVVCTLNLEKWPLDSQR 169
Query: 506 CTFKFGSRMHNSDXM 550
C + S + ++ +
Sbjct: 170 CHLRILSYAYTTEQL 184
>Z82262-4|CAE17770.1| 679|Caenorhabditis elegans Hypothetical
protein C43F9.9 protein.
Length = 679
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 502
E++WRPD ++N+ + + +R R++ G V++ R+ M +P+D Q
Sbjct: 397 EQIWRPDPYIVNSKHSYFHYVSFPNIRMRITPEGLVTYTVRVSSVCSCFMSFCLYPHDRQ 456
Query: 503 TCTFKFGSRMHNSDXMDF 556
C + S +++ + F
Sbjct: 457 ECDLRISSIAYSNQYVKF 474
>U64840-1|AAB04959.2| 484|Caenorhabditis elegans Glutamate-gated
chloride channelprotein 3 protein.
Length = 484
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +2
Query: 320 LVSSERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDISTPISMQLDNWP 490
L + +++W PD N D + R+ +G + + R+ + M L +P
Sbjct: 110 LTAGQQIWMPDSFFQNEKQAHKHDIDKPNVLIRIHRDGRILYSVRISMVLSCPMHLQYYP 169
Query: 491 NDMQTCTFKFGSRMHNSDXMDF 556
D+QTC S + + +++
Sbjct: 170 MDVQTCLIDLASYAYTENDIEY 191
>U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protein
175 protein.
Length = 287
Score = 33.5 bits (73), Expect = 0.21
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = -2
Query: 820 PXXGGVLVGRXXKAAXGXPXXRXXPGGTXXPAPQGRXPGXGXPGKXXXEHGHG 662
P GG R G P PG T P PQGR G PG+ H G
Sbjct: 162 PGNGGRPGQRGTPGEAGTPGPVGEPGETGGPGPQGRPGQRGEPGQPGTVHTPG 214
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 145 YDRESPPDSKIVVNLTLHLRHANIRGSESTVRILADLQMNWIDKRLSWNA 294
YD E+P + L +L+ ++ + + ++ ++ W D RLSWNA
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNA 112
>AJ243914-1|CAB51708.1| 484|Caenorhabditis elegans Glutamate-gated
chloride channelsubunit protein.
Length = 484
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +2
Query: 320 LVSSERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDISTPISMQLDNWP 490
L + +++W PD N D + R+ +G + + R+ + M L +P
Sbjct: 110 LTAGQQIWMPDSFFQNEKQAHKHDIDKPNVLIRIHRDGRILYSVRISMVLSCPMHLQYYP 169
Query: 491 NDMQTCTFKFGSRMHNSDXMDF 556
D+QTC S + + +++
Sbjct: 170 MDVQTCLIDLASYAYTENDIEY 191
>AC006816-3|AAK85510.3| 508|Caenorhabditis elegans Hypothetical
protein Y71D11A.5 protein.
Length = 508
Score = 33.5 bits (73), Expect = 0.21
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 502
E+LW P+ +N+ + + NG+V RL + P M L +P D
Sbjct: 143 EKLWTPNSCFINSKTADIHKSPFPNIFLMIYANGTVWTNYRLKLQGPCIMDLTKFPFDNV 202
Query: 503 TCTFKFGSRMHNSD 544
TC+ F S +N+D
Sbjct: 203 TCSLTFESFNYNTD 216
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 493
+S+ LW+P + L N+A + A+ A V + G V NWP
Sbjct: 102 ISAHSLWQPALALYNSARGNSWHLYMGAMPATVYSTGKVWSTGTFSFYVTCQFDFTNWPF 161
Query: 494 DMQTCTFKFGSRMHN 538
D Q+C ++N
Sbjct: 162 DQQSCPIVIADWVYN 176
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 32.7 bits (71), Expect = 0.36
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = +1
Query: 124 IDSLLATYDRESP----PDSKIVVNLTL---HLRHANIRGSESTVRILADLQMNWIDKRL 282
+ + A +D P PD+ N TL +L+ + E V ++ +L W D RL
Sbjct: 50 VSPVYAWFDTSKPLGYDPDAPQRYNYTLFLYNLKLIQVNEPEEQVSVVLELMEYWYDPRL 109
Query: 283 SWNA 294
SWNA
Sbjct: 110 SWNA 113
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 502
+++W PD ++N+ +++ + NG V RL++ TP S+ L +P D
Sbjct: 95 KKIWTPDTCIINSKSSSIHSSPSENTFVILYENGLVWSNFRLNVKTPCSVNLKMFPFDSL 154
Query: 503 TCTFKFGSRMHNSD 544
+C S N+D
Sbjct: 155 SCEIVLESYSFNTD 168
Score = 31.9 bits (69), Expect = 0.63
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +1
Query: 91 ECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRG-SESTVRILADLQMN- 264
E + +L +ID+LL YD P+++ VN+T+ L + G SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 265 -WIDKRLSW 288
W D RLS+
Sbjct: 68 IWQDPRLSF 76
>Z74040-6|CAA98509.2| 457|Caenorhabditis elegans Hypothetical
protein K10D6.1 protein.
Length = 457
Score = 32.3 bits (70), Expect = 0.48
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIK-RLDISTPISMQLDNWPNDM 499
E+LW P+ +N+ D + + NG+V W+ R+++ P + L+ +P D+
Sbjct: 134 EQLWTPNSCFVNSKFAEIHDSPFKNVFLMIYPNGTV-WVNYRVNVKGPCDLSLELFPLDI 192
Query: 500 QTCTFKFGSRMHNS 541
Q C + S +N+
Sbjct: 193 QECHLIYESFNYNN 206
>AF040661-8|AAG24222.1| 327|Caenorhabditis elegans Hypothetical
protein W10G11.16 protein.
Length = 327
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 502
E++WRPD NA + R+ +G V + R+ I ++ L +P+D Q
Sbjct: 35 EKIWRPDPFFANAKEAEFHEVTFLNFLMRIFPDGLVLYETRVKIKPSCNLILCKYPHDKQ 94
Query: 503 TC 508
TC
Sbjct: 95 TC 96
>AF022985-15|AAB69969.2| 435|Caenorhabditis elegans Hypothetical
protein T15B7.16 protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.48
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIK-RLDISTPISMQLDNWPNDM 499
E+LW P+V +N+ T ++ + + NG+V W+ RL + +P + L +P D+
Sbjct: 113 EKLWTPNVCFVNSKKTEIHSSPTPNIFLMIYPNGTV-WVNYRLQVQSPCMVDLVLFPMDI 171
Query: 500 QTCTFKFGSRMHNS 541
C S +N+
Sbjct: 172 MNCELIIESYAYNA 185
>U97196-15|AAN60541.1| 239|Caenorhabditis elegans Altered
avermectin sensitivityprotein 14, isoform c protein.
Length = 239
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = +2
Query: 329 SERLWRPDVVLLN---AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 499
S+++W PD N A + R+ NG + + RL + M L+ +P D
Sbjct: 122 SQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLEFYPLDR 181
Query: 500 QTCTFKFGSRMHNSDXMDF 556
Q C S + + + +
Sbjct: 182 QNCLIDLASYAYTTQDIKY 200
>U97196-14|AAK68665.2| 416|Caenorhabditis elegans Altered
avermectin sensitivityprotein 14, isoform a protein.
Length = 416
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = +2
Query: 329 SERLWRPDVVLLN---AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 499
S+++W PD N A + R+ NG + + RL + M L+ +P D
Sbjct: 122 SQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLEFYPLDR 181
Query: 500 QTCTFKFGSRMHNSDXMDF 556
Q C S + + + +
Sbjct: 182 QNCLIDLASYAYTTQDIKY 200
>U97196-13|AAK68666.1| 430|Caenorhabditis elegans Altered
avermectin sensitivityprotein 14, isoform b protein.
Length = 430
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = +2
Query: 329 SERLWRPDVVLLN---AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 499
S+++W PD N A + R+ NG + + RL + M L+ +P D
Sbjct: 122 SQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLEFYPLDR 181
Query: 500 QTCTFKFGSRMHNSDXMDF 556
Q C S + + + +
Sbjct: 182 QNCLIDLASYAYTTQDIKY 200
>U41113-1|AAC25482.1| 430|Caenorhabditis elegans inhibitory amino
acid receptorsubunit gbr-2B protein.
Length = 430
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = +2
Query: 329 SERLWRPDVVLLN---AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 499
S+++W PD N A + R+ NG + + RL + M L+ +P D
Sbjct: 122 SQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLEFYPLDR 181
Query: 500 QTCTFKFGSRMHNSDXMDF 556
Q C S + + + +
Sbjct: 182 QNCLIDLASYAYTTQDIKY 200
>U40573-1|AAC25481.1| 416|Caenorhabditis elegans inhibitory amino
acid receptorsubunit gbr-2A protein.
Length = 416
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = +2
Query: 329 SERLWRPDVVLLN---AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 499
S+++W PD N A + R+ NG + + RL + M L+ +P D
Sbjct: 122 SQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLEFYPLDR 181
Query: 500 QTCTFKFGSRMHNSDXMDF 556
Q C S + + + +
Sbjct: 182 QNCLIDLASYAYTTQDIKY 200
>AF003138-1|AAK21371.3| 469|Caenorhabditis elegans Hypothetical
protein F12B6.3 protein.
Length = 469
Score = 31.9 bits (69), Expect = 0.63
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +2
Query: 338 LWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIK-RLDISTPISMQLDNWPNDMQT 505
+W P+V ++N + + + + NG++ W+ R+ + +P SM L +P D Q
Sbjct: 110 IWSPNVCIVNTKSAHVHRSPKPNVLLMLLPNGTI-WLNYRIRVQSPCSMDLARFPIDTQY 168
Query: 506 CTFKFGSRMHNS 541
C F S +N+
Sbjct: 169 CQLVFESYSYNT 180
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 31.5 bits (68), Expect = 0.84
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 784 KAAXGXPXXRXXPGGTXXPAPQGRXPGXGXPG 689
K G P R PG P PQGR G PG
Sbjct: 144 KCPAGPPGPRGAPGSVGEPGPQGRDGMGGRPG 175
>U42836-1|ABC48243.1| 497|Caenorhabditis elegans Hypothetical
protein T21F2.1a protein.
Length = 497
Score = 31.5 bits (68), Expect = 0.84
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 338 LWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIK-RLDISTPISMQLDNWPNDMQT 505
+W P+V +N+ + + + NG+V W+ R+ ++ P + L +P D Q+
Sbjct: 166 MWSPNVCFVNSKKVEIHASPSQNILLLIFPNGTV-WLNFRVSLTGPCKLDLTYFPMDRQS 224
Query: 506 CTFKFGSRMHNS 541
C F S +N+
Sbjct: 225 CNLVFESYSYNT 236
>Z49888-6|CAD44128.1| 428|Caenorhabditis elegans Hypothetical
protein F47A4.1b protein.
Length = 428
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +2
Query: 317 WLVSSERLWRPDVVLLNA--AATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNW 487
W V + +W P+ +N+ A + + + V NGSV R+ + P M L +
Sbjct: 134 WAVM-QNIWTPNTCFINSKKAQLHSSPFTNVFLMVFPNGSVWSNWRIKSTGPCVMDLTKF 192
Query: 488 PNDMQTCTFKFGSRMHNSD 544
P D CT F S +N D
Sbjct: 193 PMDSIECTLTFESFNYNKD 211
>Z49888-5|CAA90065.2| 409|Caenorhabditis elegans Hypothetical
protein F47A4.1a protein.
Length = 409
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +2
Query: 317 WLVSSERLWRPDVVLLNA--AATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNW 487
W V + +W P+ +N+ A + + + V NGSV R+ + P M L +
Sbjct: 115 WAVM-QNIWTPNTCFINSKKAQLHSSPFTNVFLMVFPNGSVWSNWRIKSTGPCVMDLTKF 173
Query: 488 PNDMQTCTFKFGSRMHNSD 544
P D CT F S +N D
Sbjct: 174 PMDSIECTLTFESFNYNKD 192
>Z47069-5|CAD44131.1| 428|Caenorhabditis elegans Hypothetical
protein F47A4.1b protein.
Length = 428
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +2
Query: 317 WLVSSERLWRPDVVLLNA--AATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNW 487
W V + +W P+ +N+ A + + + V NGSV R+ + P M L +
Sbjct: 134 WAVM-QNIWTPNTCFINSKKAQLHSSPFTNVFLMVFPNGSVWSNWRIKSTGPCVMDLTKF 192
Query: 488 PNDMQTCTFKFGSRMHNSD 544
P D CT F S +N D
Sbjct: 193 PMDSIECTLTFESFNYNKD 211
>Z47069-4|CAA87339.2| 409|Caenorhabditis elegans Hypothetical
protein F47A4.1a protein.
Length = 409
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +2
Query: 317 WLVSSERLWRPDVVLLNA--AATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNW 487
W V + +W P+ +N+ A + + + V NGSV R+ + P M L +
Sbjct: 115 WAVM-QNIWTPNTCFINSKKAQLHSSPFTNVFLMVFPNGSVWSNWRIKSTGPCVMDLTKF 173
Query: 488 PNDMQTCTFKFGSRMHNSD 544
P D CT F S +N D
Sbjct: 174 PMDSIECTLTFESFNYNKD 192
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 187 LTLHLRHANIRGSESTVRILADLQMNWIDKRLSWNA 294
L +L+ ++ E V ++ +L W D RLSWN+
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical
protein B0491.4 protein.
Length = 454
Score = 30.7 bits (66), Expect = 1.5
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +1
Query: 214 IRGSESTVRILADLQMNWIDKRLSWNAGG 300
++GS + D+ +NW D+R+ W+ G
Sbjct: 83 VKGSSYQFNVFGDIYLNWKDERMKWDKKG 111
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 178 VVNLTLHLRHANIRGSESTVRILADLQMNWIDKRLSWN 291
+V++ H+ H +I E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 178 VVNLTLHLRHANIRGSESTVRILADLQMNWIDKRLSWN 291
+V++ H+ H +I E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>Z81509-9|CAB04158.3| 503|Caenorhabditis elegans Hypothetical
protein F21A3.7 protein.
Length = 503
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = +2
Query: 305 GCSTWLVSSERLWRPDVVL---LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQ 475
G +SS +W P+ L LN RV+ G V + + +
Sbjct: 26 GAEEIFLSSSDIWIPEFSLYYSLNFNDAVKLQSNNDVRVNYTGQVRYYIPFSSESLCKLD 85
Query: 476 LDNWPNDMQTCTFKFGSRMHNSDXMDF 556
+ +P D+Q C+ FGS H++D + +
Sbjct: 86 VKFFPFDVQQCSLLFGSWAHSNDSIKY 112
>Z81463-12|CAB03855.3| 503|Caenorhabditis elegans Hypothetical
protein F21A3.7 protein.
Length = 503
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = +2
Query: 305 GCSTWLVSSERLWRPDVVL---LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQ 475
G +SS +W P+ L LN RV+ G V + + +
Sbjct: 26 GAEEIFLSSSDIWIPEFSLYYSLNFNDAVKLQSNNDVRVNYTGQVRYYIPFSSESLCKLD 85
Query: 476 LDNWPNDMQTCTFKFGSRMHNSDXMDF 556
+ +P D+Q C+ FGS H++D + +
Sbjct: 86 VKFFPFDVQQCSLLFGSWAHSNDSIKY 112
>Z81050-9|CAB02858.2| 400|Caenorhabditis elegans Hypothetical
protein C50B6.11 protein.
Length = 400
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +2
Query: 335 RLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIK-RLDISTPISMQLDNWPNDMQ 502
+LW P+ +N+ + + + + +NG+V W+ R+ + +M L ++P D Q
Sbjct: 152 KLWTPNTCFVNSKFAEIYESSFQNVFLTLFDNGTV-WVNYRVRVKGACNMDLVDFPMDTQ 210
Query: 503 TCTFKFGSRMHNSD 544
+C + S +N++
Sbjct: 211 SCRLNYQSFTYNNE 224
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 160 PPDSKIVVNLTLHLRHANIRGSESTVRILADLQMNWIDKRLSWNAGGM-GLQHL 318
PP +I + L++ ++ + E L D + +W D RLSW+ G+ H+
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHI 131
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTAGD--YALRARVSNNGSVSWIKRLDISTPISMQLDNWPND 496
V ++W P+ +++ + D Y A + +NGS+ S M + +P D
Sbjct: 133 VPRSKVWIPETTIVDCSEIKVFDNEYTRYAWLHSNGSIGMYIASVTSVVCQMDVYKFPMD 192
Query: 497 MQTCTFKF 520
TC+ F
Sbjct: 193 THTCSVNF 200
>U28928-2|AAA68335.2| 329|Caenorhabditis elegans Hypothetical
protein C44B7.4 protein.
Length = 329
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 28 VDDLYYSCYRFLLTCAIASAAECENATSLS 117
+D YY CYR C I+ A C+N+T L+
Sbjct: 124 LDGGYYRCYRSHEFCLISDAILCKNSTILN 153
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +3
Query: 672 CSXMXFPGXPXPGXRPWGAGXXVPPGXSLXXGS--PXAALXXRPTKTPP 812
C+ PG P PG RP G PG G+ AA P+ PP
Sbjct: 113 CTGCCNPGPPGPGGRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPP 161
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = -2
Query: 778 AXGXPXXRXXPGGTXXPAPQGRXPGXGXPGKXXXEHGHGG 659
A G P + PGG P G+ G PG E G G
Sbjct: 189 APGAPGPKGAPGGPGQPGRDGQPGQAGQPGSSSSEPGQPG 228
>Z46791-7|CAA86760.2| 473|Caenorhabditis elegans Hypothetical
protein C09G5.1 protein.
Length = 473
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +2
Query: 338 LWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 508
LW PD+ NA + D + NG+V + R+ ++ L +P D Q C
Sbjct: 121 LWHPDLYFANARTASFHDVTQPNFLVWIYPNGTVWYDCRISLTVLCMQDLARYPLDSQNC 180
Query: 509 TFKFGSRMHNSDXM 550
+ S ++ + +
Sbjct: 181 GLRILSYAYDEEQL 194
>U40187-1|AAA81158.3| 459|Caenorhabditis elegans Hypothetical
protein F11H8.2 protein.
Length = 459
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +2
Query: 338 LWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 508
+W PD N + A + R+ N+G+V RL ++ M L +P D Q C
Sbjct: 131 IWTPDTFFPNEKKSFFHEATSHNSFLRIDNHGNVLRSIRLTVTANCPMSLHTFPLDRQEC 190
Query: 509 TFKFGS 526
+ S
Sbjct: 191 ALEVES 196
>AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical
protein F09G2.5 protein.
Length = 563
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +2
Query: 329 SERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 499
++R+W PD+ +N+ + L V +G + RLD++ M L +P D
Sbjct: 200 ADRIWYPDLYFVNSKYAYLQEVTTPNLMVIVYPDGLIFKTMRLDVTLSCMMDLKLFPLDY 259
Query: 500 QTC 508
Q C
Sbjct: 260 QEC 262
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 320 LVSSERLWRPDVVLLNA-AATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLD--NWP 490
L S RLW PD+ + + D+ + +N + + RL+ Q+D +P
Sbjct: 130 LKSMGRLWSPDINSDKLQTGSQSTDFVNYHDIQSNYNGNVTARLEFRMKAQCQIDYTEYP 189
Query: 491 NDMQTCTFKFGSRMH 535
ND + C F S ++
Sbjct: 190 NDRKHCCFNLQSNLY 204
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 320 LVSSERLWRPDVVLLNA-AATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLD--NWP 490
L S RLW PD+ + + D+ + +N + + RL+ Q+D +P
Sbjct: 130 LKSMGRLWSPDINSDKLQTGSQSTDFVNYHDIQSNYNGNVTARLEFRMKAQCQIDYTEYP 189
Query: 491 NDMQTCTFKFGSRMH 535
ND + C F S ++
Sbjct: 190 NDRKHCCFNLQSNLY 204
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/83 (20%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = +1
Query: 58 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRG 222
F L + + E + T + D L+ YD P + +++N++++ +
Sbjct: 10 FYLAISWCNLLEVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVLTLDP 69
Query: 223 SESTVRILADLQMNWIDKRLSWN 291
+E T+ ++ + W D+ L WN
Sbjct: 70 AEETINFSSEFILQWKDEFLFWN 92
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 410 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 514
+S++G V R+ ++ P ++PND + CTF
Sbjct: 146 ISSSGMVRTSARMMLTIPCRTGFGSYPNDYKNCTF 180
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 160 PPDSKIVVNLTLHLRHANIRGSESTVRILADLQMNWIDKRLSWN 291
PP +++ + + + L+ ++ E V L D W D+RL WN
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWN 93
>Z92812-8|CAB07275.1| 337|Caenorhabditis elegans Hypothetical
protein T03E6.7 protein.
Length = 337
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = -1
Query: 272 SIQFI*RSASIRTVDSDPRMLACLKCRVRLTTILESGGDSRSYVARSESIMRDSDVAFSH 93
+ ++I + + T +S P +KC T+ G D + YV E +A +
Sbjct: 192 AFEYIRDNHGVDTEESYPYKGRDMKCHFNKKTV---GADDKGYVDTPEGDEEQLKIAVAT 248
Query: 92 SAALAIAQVRRNR*QE*YKSSTFYD 18
++IA +R + YK +YD
Sbjct: 249 QGPISIAIDAGHRSFQLYKKGVYYD 273
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = -2
Query: 796 GRXXKAAXGXPXXRXXPGGTXXPAPQGRXPGXGXPGK 686
G G R PG + P PQG G G PG+
Sbjct: 185 GHPGAPGQGGQRSRGTPGPSGAPGPQGPAGGPGQPGQ 221
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +3
Query: 672 CSXMXFPGXPXPGXRPWGAGXXVPPGXSLXXGSP--XAALXXRPTKTPP 812
C PG P PG P G PG G+P A+ P PP
Sbjct: 98 CDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPP 146
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +3
Query: 672 CSXMXFPGXPXPGXRPWGAGXXVPPGXSLXXGSP--XAALXXRPTKTPP 812
C PG P PG P G PG G+P A+ P PP
Sbjct: 98 CDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPP 146
>U59743-1|AAB03402.1| 155|Caenorhabditis elegans glutamate-gated
chloride channel protein.
Length = 155
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = +2
Query: 407 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDF 556
R+ NG + + RL + M L+ +P D Q C S + + + +
Sbjct: 27 RIHKNGQILYSVRLSLVLSCPMSLEFYPLDRQNCLIDLASYAYTTQDIKY 76
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +3
Query: 672 CSXMXFPGXPXPGXRPWGAGXXVPPGXSLXXGSP--XAALXXRPTKTPP 812
C PG P PG P G PG G+P A+ P PP
Sbjct: 98 CDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPP 146
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +3
Query: 672 CSXMXFPGXPXPGXRPWGAGXXVPPGXSLXXGSP--XAALXXRPTKTPP 812
C PG P PG P G PG G+P A+ P PP
Sbjct: 98 CDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPP 146
>AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical
protein C04C3.2 protein.
Length = 464
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Frame = +2
Query: 338 LWRPDVVLLNAAATT--AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 511
+W P + + N+ T D R+ + G V +ST + +D +P D Q C
Sbjct: 122 VWVPKLFIYNSMDTKDMLTDDRYDVRIQHTGHVKVNSPQFVSTLCRINIDLFPFDTQFCA 181
Query: 512 FKFGSRMHNSDXMDFVIDXRXYXMFXSG--XWDVTDLS 619
S + + + MD + SG W V +++
Sbjct: 182 IALASPLLSVEEMDVNATQPPVDSYFSGNAEWQVMNVT 219
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = -2
Query: 796 GRXXKAAXGXPXXRXXPGGTXXPAPQGRXPGXGXPGK 686
G G R PG + P PQG G G PG+
Sbjct: 195 GSPGNPGRGGQRSRGLPGPSGRPGPQGPAGGPGQPGQ 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,795,548
Number of Sequences: 27780
Number of extensions: 390544
Number of successful extensions: 1933
Number of sequences better than 10.0: 124
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1860
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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