Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_L09
(861 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0783 - 21166491-21166892,21167139-21167251,21168127-211682... 89 4e-18
03_03_0132 + 14711645-14711839,14712641-14712970,14713689-147137... 86 4e-17
01_05_0726 - 24630080-24630778,24630899-24631011,24631088-246311... 84 1e-16
05_04_0441 - 21271106-21271495,21271608-21271751,21272639-212727... 64 1e-10
08_02_0636 + 19567654-19568859 63 3e-10
11_06_0655 - 25923171-25923185,25923208-25923432,25923865-259243... 56 5e-08
02_05_1022 + 33570664-33570976,33572206-33573440,33573873-335740... 55 8e-08
01_06_0360 - 28729006-28729446,28729810-28730258,28730499-28731480 52 6e-07
12_01_0744 - 6688631-6688660,6689032-6690603,6690697-6691497 50 2e-06
02_03_0193 + 16211395-16212729,16212894-16213401,16213712-16214112 45 7e-05
08_02_0191 + 14041201-14043894,14044354-14044632 45 9e-05
06_01_0410 + 2928382-2930973 44 1e-04
12_01_0655 + 5546293-5546478,5546760-5546877,5550697-5550776,555... 44 2e-04
05_03_0179 - 9257066-9258946 41 0.001
01_06_1468 + 37574124-37574180,37574275-37574346,37574437-375745... 41 0.001
07_01_0605 + 4503507-4503605,4504118-4504249,4504745-4504881,450... 37 0.024
04_04_1056 - 30447791-30447850,30448020-30448085,30448299-304485... 32 0.68
11_01_0268 - 2029007-2029464,2029521-2029615,2030815-2031077,203... 31 0.89
11_06_0490 - 24293218-24293373,24293454-24293521,24293845-242939... 31 1.6
02_01_0500 - 3623837-3624019,3624591-3624778,3625209-3626147,362... 31 1.6
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 30 2.1
10_08_0154 + 15266430-15266953,15267748-15267820,15267893-152679... 30 2.7
01_01_0452 - 3357687-3358332,3358779-3359641 29 3.6
01_06_1096 + 34502668-34503036,34504294-34505317,34505388-34505656 29 6.3
11_06_0232 + 21559467-21559532,21559586-21560200 28 8.3
09_01_0086 - 1225132-1225299,1225530-1225679,1227629-1228006,122... 28 8.3
04_03_0210 + 12691551-12692099 28 8.3
01_06_0956 - 33343503-33344086,33344225-33344384 28 8.3
>08_02_0783 -
21166491-21166892,21167139-21167251,21168127-21168208,
21168298-21168416,21168471-21168528,21168954-21169016,
21169641-21169850,21171549-21171731
Length = 409
Score = 89.0 bits (211), Expect = 4e-18
Identities = 48/136 (35%), Positives = 80/136 (58%), Gaps = 2/136 (1%)
Frame = +2
Query: 212 KLPARPNHILLYTIINPAYPITVDVIHTISTPHGQVQRIVVFKKN-GVQAMVEFESVESA 388
K+ +++LL +I N Y +TVDV+HT+ + G VQ+I +F+KN G+QA++++ + +A
Sbjct: 184 KIKEPESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAMFEKNGGMQALIQYPDITTA 243
Query: 389 TRAKEALHGCDIY-SGCCTLKIEFAKPEKLNVFKNDQESWDYTLSEDLQPVQRSAPLLQS 565
AK+AL G IY G C L + +++ LNV +D+ S DYT+S D ++A
Sbjct: 244 AVAKQALEGHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTVSSDPSAQMQAAAQAPG 303
Query: 566 PQYTGGRPQPYNPNST 613
P G Q P+++
Sbjct: 304 PSTPGVAWQNTAPSAS 319
>03_03_0132 +
14711645-14711839,14712641-14712970,14713689-14713751,
14713833-14713906,14714004-14714099,14714705-14714759,
14714867-14714971,14715054-14715135,14715450-14715562,
14715717-14716118
Length = 504
Score = 85.8 bits (203), Expect = 4e-17
Identities = 52/142 (36%), Positives = 81/142 (57%), Gaps = 3/142 (2%)
Frame = +2
Query: 209 RKLPARPNHILLYTIINPAYPITVDVIHTISTPHGQVQRIVVFKKN-GVQAMVEFESVES 385
RK+ A N +LL +I N Y +TVDV+HT+ + G VQ+I +F+KN G QA++++ V +
Sbjct: 279 RKVEAEGN-VLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVTT 337
Query: 386 ATRAKEALHGCDIY-SGCCTLKIEFAKPEKLNVFKNDQESWDYTLSED-LQPVQRSAPLL 559
A+ AKEAL G IY G C L + +++ LNV + +S DYT+ + +Q V + +
Sbjct: 338 ASVAKEALEGHCIYDGGYCKLHLSYSRHTDLNVKAHSDKSRDYTIPQGAMQAVPQPPGVP 397
Query: 560 QSPQYTGGRPQPYNPNSTPSQA 625
+ G PQ + P A
Sbjct: 398 TTSAGWQGNPQAGGAYAPPGAA 419
Score = 54.4 bits (125), Expect = 1e-07
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Frame = +2
Query: 233 HILLYTIIN-PAYPITVDVIHTISTPHGQVQRIVVFKK-NGVQAMVEFESVESATRAKEA 406
++LL TI A +T+DVIH + + G V +I F+K G QA++++ +A+ A+EA
Sbjct: 154 NVLLVTIEGVQANDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAATASAAREA 213
Query: 407 LHGCDI-------YSGCCTLKIEFAKPEKLNVFKNDQESWDYTLSEDLQPVQRSA 550
L G I + C L+I F+ + LN+ S DYT PV SA
Sbjct: 214 LDGRSIPRYLLPEHVTSCCLRISFSAHKDLNIKFQSHRSRDYT--NPYLPVNSSA 266
>01_05_0726 -
24630080-24630778,24630899-24631011,24631088-24631169,
24631248-24631337,24631412-24631469,24631661-24631756,
24631835-24631908,24632006-24632068,24634111-24634320,
24634869-24635048
Length = 554
Score = 84.2 bits (199), Expect = 1e-16
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 2/135 (1%)
Frame = +2
Query: 230 NHILLYTIINPAYPITVDVIHTISTPHGQVQRIVVFKKN-GVQAMVEFESVESATRAKEA 406
+++LL ++ N Y +T+DV+H + + G VQ+I +F+KN G QA++++ +++A AKEA
Sbjct: 236 SNVLLASVENMQYVVTIDVLHEVFSAFGFVQKIAIFEKNSGFQALIQYPDIQTAVAAKEA 295
Query: 407 LHGCDIY-SGCCTLKIEFAKPEKLNVFKNDQESWDYTLSEDLQPVQRSAPLLQSPQYTGG 583
L G IY G C L + F++ LNV N++ DYT + + L P Y+G
Sbjct: 296 LEGHSIYEGGYCKLHLTFSRHTDLNVKVNNERGRDYTGGNTAPTSNQPSILGPQPVYSGA 355
Query: 584 RPQPYNPNSTPSQAT 628
N+ PS AT
Sbjct: 356 Y------NNAPSSAT 364
Score = 52.8 bits (121), Expect = 3e-07
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Frame = +2
Query: 272 ITVDVIHTISTPHGQVQRIVVFKK-NGVQAMVEFESVESATRAKEALHGCDIYSGC---- 436
+++DV+H + + G VQ+I F+K +G QA+++F E+A+ AK AL G I S
Sbjct: 123 VSIDVLHLVFSAFGFVQKIATFEKASGYQALIQFCDTETASSAKAALDGRCIPSYLLPEL 182
Query: 437 ---CTLKIEFAKPEKLNVFKNDQESWDYT 514
CTL+I ++ LNV S DYT
Sbjct: 183 DVPCTLRINYSAHTVLNVKFQSHRSRDYT 211
>05_04_0441 -
21271106-21271495,21271608-21271751,21272639-21272746,
21272846-21272859,21273103-21273154,21273592-21273656,
21274447-21274579,21275260-21275341,21275639-21275715,
21276037-21276093
Length = 373
Score = 64.5 bits (150), Expect = 1e-10
Identities = 30/66 (45%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = +2
Query: 221 ARPNHILLYTIINPAYPITVDVIHTISTPHGQVQRIVVFKKN-GVQAMVEFESVESATRA 397
+ PN ILL TI + YPITV+V+H + +G V++IV F+K+ G QA+++++S++ A A
Sbjct: 74 SEPNRILLVTIHHMMYPITVEVLHQVFKAYGYVEKIVTFQKSAGFQALIQYQSLQEAMDA 133
Query: 398 KEALHG 415
ALHG
Sbjct: 134 FGALHG 139
>08_02_0636 + 19567654-19568859
Length = 401
Score = 62.9 bits (146), Expect = 3e-10
Identities = 28/76 (36%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Frame = +2
Query: 236 ILLYTIINPAYPITVDVIHTISTPHGQVQRIVVFKKNGVQ--AMVEFESVESATRAKEAL 409
+L T+ + YP+T +V+ + +P+G + + V+ + +Q A + F + ATRA+EAL
Sbjct: 84 VLHVTMSHVLYPVTAEVLLQVFSPYG-AEEVRVYNQGTIQVEAFILFRLCQDATRAREAL 142
Query: 410 HGCDIYSGCCTLKIEF 457
HGC IY+GCC L +++
Sbjct: 143 HGCCIYNGCCFLDVKY 158
>11_06_0655 -
25923171-25923185,25923208-25923432,25923865-25924324,
25924330-25924985
Length = 451
Score = 55.6 bits (128), Expect = 5e-08
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Frame = +2
Query: 236 ILLYTIINPAYPITVDVIHTISTPHGQVQ-RIVVFKKNGVQAMVEFESVESATRAKEALH 412
+L T+ YP+T +V+H + +G V +++ V+A+V F S A RA+ A H
Sbjct: 42 VLRVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 101
Query: 413 GCDIYSGCCTLKIEFAKPEKLNVFKNDQESWDYTLSEDLQPVQRSA-PLLQSPQYTGGRP 589
G DIY G C L + + + +F D + +T + P +A P+ +S T P
Sbjct: 102 GRDIYDGGCLLDV-----QHVQMFPGDGATATHTTCSTMVPSSATARPVAKS---TAAAP 153
Query: 590 QPYNPNSTPS 619
+ P +T S
Sbjct: 154 ERVFPATTAS 163
>02_05_1022 +
33570664-33570976,33572206-33573440,33573873-33574013,
33574242-33574796,33574914-33575015
Length = 781
Score = 54.8 bits (126), Expect = 8e-08
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Frame = +2
Query: 236 ILLYTIINPAYPITVDVIHTISTPHGQVQ-RIVVFKKNGVQAMVEFESVESATRAKEALH 412
+L T+ YP+T +V+H + +G V +++ V+A+V F S A RA+ A H
Sbjct: 157 VLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 216
Query: 413 GCDIYSGCCTLKIEFAKPEKLNVFKNDQESWDYTLSEDLQPVQRSAPLLQSPQYTGGRPQ 592
G DIY G C + + + + +F D + +T L V SA + + T P+
Sbjct: 217 GRDIYDGGCLMDV-----QHVQMFPGDGATTTHTTC--LTMVPSSATARPAAKSTAATPE 269
Query: 593 PYNPNSTPS 619
P +T S
Sbjct: 270 RVFPATTAS 278
>01_06_0360 - 28729006-28729446,28729810-28730258,28730499-28731480
Length = 623
Score = 52.0 bits (119), Expect = 6e-07
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 266 YPITVDVIHTISTPHGQVQ-RIVVFKKNGVQAMVEFESVESATRAKEALHGCDIYSGCCT 442
YP+T +V+H + +G V +++ GV+A V F S A RA+ +G +IY GCC
Sbjct: 69 YPVTSEVLHQVYNTYGAVAVQVLTTSPLGVEAFVWFRSSCDAERARSVTNGRNIYDGCCL 128
Query: 443 LKIEFAKP 466
L ++ P
Sbjct: 129 LDVQHVHP 136
>12_01_0744 - 6688631-6688660,6689032-6690603,6690697-6691497
Length = 800
Score = 50.4 bits (115), Expect = 2e-06
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Frame = +2
Query: 236 ILLYTIINPAYPITVDVIHTISTPHGQVQ-RIVVFKKNGVQAMVEFESVESATRAKEALH 412
+L T+ YP+T +V+H + +G V +++ V+A+V F S A RA+ H
Sbjct: 63 VLCVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSTTH 122
Query: 413 GCDIYSGCCTLKIEFAKPEKLNVFKNDQESWDYTLSEDLQPVQRSA-PLLQSPQYTGGRP 589
G DIY C L + + + +F D + +T + P +A P+ +S T P
Sbjct: 123 GHDIYDEGCLLDM-----QHVQMFPGDGATATHTTCSTMVPSSATARPVAKS---TAAAP 174
Query: 590 QPYNPNSTPS 619
+ P +T S
Sbjct: 175 ERVFPATTAS 184
>02_03_0193 + 16211395-16212729,16212894-16213401,16213712-16214112
Length = 747
Score = 45.2 bits (102), Expect = 7e-05
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 266 YPITVDVIHTISTPHGQVQ-RIVVFKKNGVQAMVEFESVESATRAKEALHGCDIYSGCCT 442
YP+T +V+H + +G V +++ GV+A+V F S A RA+ + +IY GCC
Sbjct: 76 YPVTGEVLHQVYNDYGAVAVQVLATSCWGVEALVWFRSSCDAERARSDTNERNIYDGCCL 135
Query: 443 LKIE 454
L ++
Sbjct: 136 LDVQ 139
>08_02_0191 + 14041201-14043894,14044354-14044632
Length = 990
Score = 44.8 bits (101), Expect = 9e-05
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 266 YPITVDVIHTISTPHGQVQ-RIVVFKKNGVQAMVEFESVESATRAKEALHGCDIYSGCCT 442
YP++ +V+H + P+G V +++V V+A+V F + A A+ LHG +IY G C
Sbjct: 75 YPVSTNVMHQVFNPYGAVAVQMLVVDAWRVEAIVWFRTTCDAEWAQAELHGRNIYDGGCV 134
Query: 443 LKIE 454
L ++
Sbjct: 135 LDVQ 138
>06_01_0410 + 2928382-2930973
Length = 863
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 266 YPITVDVIHTISTPHGQVQ-RIVVFKKNGVQAMVEFESVESATRAKEALHGCDIYSGCCT 442
YP++ +V+H + P+G V +++ V+A+V F + A A++ LHG +IY G C
Sbjct: 78 YPVSTNVMHQVFNPYGAVAVQMLAVDAWRVEAIVWFRTTCDAEWAQDELHGRNIYDGGCV 137
Query: 443 LKIE 454
L ++
Sbjct: 138 LDVQ 141
>12_01_0655 +
5546293-5546478,5546760-5546877,5550697-5550776,
5551329-5552345,5552523-5553344,5553528-5553800
Length = 831
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 266 YPITVDVIHTISTPHGQVQ-RIVVFKKNGVQAMVEFESVESATRAKEALHGCDIYSGCCT 442
YP+T +V+H + +G V +++ GV+A+V F S RA+ + +IY GCC
Sbjct: 203 YPVTSEVLHQVYNGYGAVAVQVLATSCWGVEALVWFRSSCDTERARSDTNEHNIYDGCCL 262
Query: 443 LKIE 454
L ++
Sbjct: 263 LDVQ 266
>05_03_0179 - 9257066-9258946
Length = 626
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 266 YPITVDVIHTISTPHGQVQ-RIVVFKKNGVQAMVEFESVESATRAKEALHGCDIYSGCCT 442
YP+T V++ + +G + I+V V+ +V F + A +A+ A HG +IY G C
Sbjct: 78 YPVTNKVLYQVYDIYGAEELHILVVDAWRVEVLVWFRARGDAKKARGATHGRNIYDGGCL 137
Query: 443 LKIEFAKP 466
L+ + A+P
Sbjct: 138 LEAQHAQP 145
>01_06_1468 +
37574124-37574180,37574275-37574346,37574437-37574513,
37574897-37574978,37576005-37576069,37576313-37576354,
37576452-37576503,37576631-37576679,37576784-37576797,
37576942-37577049,37577129-37577272,37577421-37577810
Length = 383
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 272 ITVDVIHTISTPHGQVQRIVVFKKNG-VQAMVEFESVESATRAKEALH 412
IT D IH++ HG + +F+ NG QA+V FESVE AT A H
Sbjct: 317 ITEDTIHSLVGEHGTIANSRLFETNGKTQALVLFESVEEATEALVEKH 364
>07_01_0605 +
4503507-4503605,4504118-4504249,4504745-4504881,
4505024-4505156
Length = 166
Score = 36.7 bits (81), Expect = 0.024
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 347 GVQAMVEFESVESATRAKEALHGCDIYSGCCTLKIE 454
GV+A V F S A RA+ +G +IY GCC L ++
Sbjct: 41 GVEASVWFRSTCDAERARSITNGRNIYDGCCLLDVQ 76
>04_04_1056 -
30447791-30447850,30448020-30448085,30448299-30448583,
30448744-30448869,30449068-30449154,30449273-30449695
Length = 348
Score = 31.9 bits (69), Expect = 0.68
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +2
Query: 197 PCRKRKLPARPNHILLYTIINPAYPITVDVIHTISTPHGQVQRIVVFKKNGVQAMVEFES 376
P + PA P+ L PA +T D I G+V + +GV+ +V F
Sbjct: 14 PLGEGAAPA-PSAALYVANCGPAVGLTHDDIRAAFAAFGEVAGVHGADGSGVRVIVRFRE 72
Query: 377 VESATRAKEALHG--CDIYSGCCTLKIEFAKPEK 472
+A A ALHG C +G L I ++ P K
Sbjct: 73 PAAAEAAMSALHGRPCAGLAG-RVLHIRYSVPAK 105
>11_01_0268 -
2029007-2029464,2029521-2029615,2030815-2031077,
2031154-2031279,2031404-2032996
Length = 844
Score = 31.5 bits (68), Expect = 0.89
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1
Query: 211 KATGAAEPHTALHHHQSGISHHCGRNTHNKHPARTSAKDRRLQEEWRAGDG 363
+ G + H + G GR+ + AR + RRL+E RAGDG
Sbjct: 179 RCVGQRKDAAPTHQLRIGAGRDQGRSVRLRRDAREDGRGRRLEEGNRAGDG 229
>11_06_0490 -
24293218-24293373,24293454-24293521,24293845-24293986,
24294079-24294699,24294791-24294871,24295002-24295072,
24296106-24296176,24296568-24296675,24296786-24297024,
24297493-24297657
Length = 573
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 266 YPITVDVIHTISTPHGQVQRIVVFKKNGVQAMVEFESVESATRAKEALHG 415
Y V V+ P G V ++ +Q +EF VES+T+AK +HG
Sbjct: 499 YGNLVKVVIPRPDPSGAPVAGVGRHESALQVFLEFADVESSTKAKNGMHG 548
>02_01_0500 -
3623837-3624019,3624591-3624778,3625209-3626147,
3626311-3626479,3626701-3626871,3626948-3627016,
3627094-3627201,3627844-3627997,3628659-3628738,
3628822-3628914,3628951-3629073,3629165-3629915,
3630123-3630163,3630338-3630385
Length = 1038
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 356 AMVEFESVESATRAKEALHGCDIYSGCCTLKIEFAK 463
A + F SVE AT+A EA +G + L++ +AK
Sbjct: 483 AFIHFHSVEEATKALEATNGITLEKNGQVLRVTYAK 518
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 257 NPAYPITV-DVIHTISTPHGQVQRIVVFKKNGVQAMVEFESVESATRAKEALHG 415
+P + + + D + + GQV+ I V K + F+S+ +A A++ALHG
Sbjct: 489 DPDFDLDIKDDVQEECSKFGQVKHIFVDKNTSGFVYLRFDSITAAMSAQKALHG 542
>10_08_0154 +
15266430-15266953,15267748-15267820,15267893-15267949,
15268248-15268303,15269584-15269797,15270497-15270538,
15270661-15270735,15270820-15270903,15271880-15271944,
15272436-15272655,15272820-15272908,15273326-15273440,
15273519-15273554
Length = 549
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 257 NPAYPITV-DVIHTISTPHGQVQRIVVFKKNGVQAMVEFESVESATRAKEALHG 415
+P + + + D + + G V I V K + F+SV +AT A+ ALHG
Sbjct: 472 DPDFDLDIKDDVQDECSKFGAVNHIFVDKNTAGFVYLHFDSVAAATAAQRALHG 525
>01_01_0452 - 3357687-3358332,3358779-3359641
Length = 502
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 650 NLHCSIW-W*PGMVSSLDCKAGVVHLCTAVTAKAGRSSVPAASPRIMCSPSSPGRF*TRS 474
+L +W W + ++ + LC T A SS P+ + ++ +P + F T S
Sbjct: 4 SLPLDVWGWITNLPPFSQWRSNAMSLCICPTPSASESSQPSVNLSVVKTPPTQPSFVTFS 63
Query: 473 IFRALRI 453
IF R+
Sbjct: 64 IFANYRV 70
>01_06_1096 + 34502668-34503036,34504294-34505317,34505388-34505656
Length = 553
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 485 KNDQESW-DYTLSEDLQPVQRSAPLLQSPQYT 577
++D SW YT++ LQP + P LQSP T
Sbjct: 328 ESDPNSWLKYTVAPALQPTELVDPYLQSPAAT 359
>11_06_0232 + 21559467-21559532,21559586-21560200
Length = 226
Score = 28.3 bits (60), Expect = 8.3
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +3
Query: 312 DKCKGSSSSRRMACRRWLSLKAWNQRREQRKXXXXXXXXXXXXHSKLNSQSPK-N*TCSK 488
D +G RR+A RR L+ + RE+ K ++Q+ + +K
Sbjct: 72 DVGEGGPQRRRIASRRHGELRVEARAREREKSRGGAEEEVDGHTCCKSAQAASVHPGGAK 131
Query: 489 TTRRAGTTHYPRTCSRYRGAP 551
AGTT PR +R RGAP
Sbjct: 132 RQAAAGTTVTPRPRARTRGAP 152
>09_01_0086 -
1225132-1225299,1225530-1225679,1227629-1228006,
1229103-1229150
Length = 247
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 680 RTSAGCVDCTNLHCSIWW*PGMVSSLDCK 594
R AG CT+ HC + P + SL CK
Sbjct: 164 RPKAGTPHCTSCHCWLHNAPSLTCSLSCK 192
>04_03_0210 + 12691551-12692099
Length = 182
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 618 PRLPPDAAVKIRAVNTASTRANXPPMIWTMEV 713
P P AA + AVN A +A PP+ W+ V
Sbjct: 32 PLSPAAAAKLVSAVNDARRQAGAPPVAWSATV 63
>01_06_0956 - 33343503-33344086,33344225-33344384
Length = 247
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = -1
Query: 480 TFNFSGFANSILSVQHPEYMSQPCSASFALVADSTLSNSTIACTPFFLKTTILCTCP 310
TF +S + N ++ V +Y + CSA+ + ADS+ S + + TP K +C P
Sbjct: 54 TFKYSSYHN-VVEVTKDDY--EACSATSPVSADSSGSTTIVLTTPG--KRYFICGAP 105
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,008,300
Number of Sequences: 37544
Number of extensions: 632947
Number of successful extensions: 2203
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2184
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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