Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_L05
         (870 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    25   0.91 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   1.6  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   2.1  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = +1

Query: 361  LLEDTPSSSTNGTETLVPEDNLYALMPPFE-TF-LNVDKTARLRHFFDNVKTGEL 519
            +L   P S   GT  ++P+DN    +P  E  F LNV+        ++ + T +L
Sbjct: 1047 ILNLRPLSMEKGTRPMIPDDNTSLALPKNEGPFRLNVETAKTNEEMWELIDTEKL 1101


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
 Frame = -2

Query: 638  PTGKKALTLMSATYLEVGPAVQRTLSIIPDAVLLITAPT----ISSPVFTLSKKCLNLAV 471
            PTG+  L  ++ T L   P +    +I PD+  L+T       ++  V  +S   L  A 
Sbjct: 722  PTGQLLLDYLTDTVLAYKPKILGKPTISPDSRHLVTLDKQETGVTLVVQEISSDGLKFAF 781

Query: 470  -LSTFRNVSNGGINAYKLSSGTRVSVPLVDDEGV 372
             + T  N+S+  +   + + G  +    +D E +
Sbjct: 782  DVKTTLNISDIALYPSQTTHGYDIYASSIDKENI 815



 Score = 22.2 bits (45), Expect = 6.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 718 EVIPXTDQNGCGMXGV 765
           +VIP T ++ CG+ G+
Sbjct: 532 DVIPGTQEHVCGVKGI 547


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 385 STNGTETLVPEDNLYALMPPFETFLNVDKTARLRH 489
           S    ET++  ++ Y L PP E   +  +T R R+
Sbjct: 109 SRQDIETIIRRNSRYPLRPPQEVISHYRRTRRDRY 143


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,705
Number of Sequences: 438
Number of extensions: 4661
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)