Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_L04
         (851 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1101 - 24308433-24308978,24309195-24309364,24309443-243095...    38   0.013
08_02_0137 - 13049872-13050893,13051022-13051175                       30   2.7  
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275...    29   4.7  
06_03_0088 + 16469006-16469189,16469664-16469797                       29   6.2  
01_07_0206 + 41990251-41992032,41992131-41992361                       28   8.2  

>08_02_1101 -
           24308433-24308978,24309195-24309364,24309443-24309542,
           24310337-24310500,24310960-24310996,24311222-24311262,
           24313877-24314093
          Length = 424

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = -2

Query: 640 ENKRGTXHGLILYAGRNVIDAFQGNAQVLDLPGPGYELTKESNRGCEIPPPNTGGN 473
           + KR    G I+++   V+D    N  ++DL G   E+ K   +    PPP++ G+
Sbjct: 209 QTKRSRGFGFIVFSSDQVVDDLLANGNMIDLAGAKVEIKKAEPKKSSNPPPSSHGS 264


>08_02_0137 - 13049872-13050893,13051022-13051175
          Length = 391

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 795 IEXVXXCFRPRVTEHHTRRKS*PALMPSFVKVTLFPKGHFTP 670
           I     C +PR  + H   K  P LM   + +TLFP+G   P
Sbjct: 128 ISGAPICKKPRTNDIH---KPTPRLMHKLIAMTLFPRGDLRP 166


>07_03_1691 -
           28726307-28726323,28726588-28726953,28727483-28727567,
           28728255-28728387,28729793-28730328
          Length = 378

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = -2

Query: 553 DLPGPGYELTKESNRGCEIPP-PNTGGNPCGASP 455
           D P PG       N  C +PP P+ GG   GA P
Sbjct: 9   DQPSPGRSPNPNLNLPCPLPPIPSCGGGGGGAGP 42


>06_03_0088 + 16469006-16469189,16469664-16469797
          Length = 105

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -2

Query: 631 RGTXHGLILYAGRNVIDAFQGNAQVLDLPGPGYELTKESNRGCEIPPPNTGGNP 470
           R   H   L +G  ++   + NA +L  P  G  +T +++  C   PP  GGNP
Sbjct: 22  RPEAHTFHLSSGELMV-TLEDNAIILVHPSRGQAVTSDTS--CGTKPPKLGGNP 72


>01_07_0206 + 41990251-41992032,41992131-41992361
          Length = 670

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +2

Query: 329 YSSRNKSLIAKKLQSAALALGQWFRKWR 412
           Y + +K+ ++K+ + + L LGQW   WR
Sbjct: 272 YVNMDKTWLSKQAEMSTLQLGQWKPSWR 299


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,555,770
Number of Sequences: 37544
Number of extensions: 596546
Number of successful extensions: 1599
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1599
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)