Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_L04
(851 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3 ... 35 0.43
AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen... 35 0.43
EF629347-1|ABR15764.1| 1998|Homo sapiens Nav1.5 Na+ channel prot... 31 5.3
EF629346-1|ABR15763.1| 2016|Homo sapiens Nav1.5 Na+ channel prot... 31 5.3
EF179185-1|ABN05288.1| 2015|Homo sapiens sodium channel, voltage... 31 5.3
DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein ... 31 5.3
AY148488-1|AAN61120.1| 2015|Homo sapiens cardiac sodium channel ... 31 5.3
AB208866-1|BAD92103.1| 1576|Homo sapiens voltage-gated sodium ch... 31 5.3
AB158470-1|BAD12085.1| 1962|Homo sapiens TTX-resistant sodium ch... 31 5.3
AB158469-1|BAD12084.1| 2016|Homo sapiens TTX-resistant sodium ch... 31 5.3
>X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3
chain protein.
Length = 1670
Score = 34.7 bits (76), Expect = 0.43
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = -2
Query: 616 GLILYAGRNVIDAFQGNAQVLDLPGPGYELTKESNRGCEIPP--PNTGGNPCGASP 455
GL GR +D G V LPGP EL +G + PP P + G+P A P
Sbjct: 557 GLRGQPGRKGLDGIPGTLGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSPGPAGP 612
>AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen
protein.
Length = 1670
Score = 34.7 bits (76), Expect = 0.43
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = -2
Query: 616 GLILYAGRNVIDAFQGNAQVLDLPGPGYELTKESNRGCEIPP--PNTGGNPCGASP 455
GL GR +D G V LPGP EL +G + PP P + G+P A P
Sbjct: 557 GLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSPGPAGP 612
>EF629347-1|ABR15764.1| 1998|Homo sapiens Nav1.5 Na+ channel
protein.
Length = 1998
Score = 31.1 bits (67), Expect = 5.3
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 88 DFQTIQHGRAG*SRAHHTGLLVE-PLFSISSRGNPLLPTTS 207
DF ++ AG S +HHT LLV PL S++G P P TS
Sbjct: 542 DFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP-SPGTS 581
>EF629346-1|ABR15763.1| 2016|Homo sapiens Nav1.5 Na+ channel
protein.
Length = 2016
Score = 31.1 bits (67), Expect = 5.3
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 88 DFQTIQHGRAG*SRAHHTGLLVE-PLFSISSRGNPLLPTTS 207
DF ++ AG S +HHT LLV PL S++G P P TS
Sbjct: 542 DFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP-SPGTS 581
>EF179185-1|ABN05288.1| 2015|Homo sapiens sodium channel,
voltage-gated, type V, alpha (long QT syndrome 3)
protein.
Length = 2015
Score = 31.1 bits (67), Expect = 5.3
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 88 DFQTIQHGRAG*SRAHHTGLLVE-PLFSISSRGNPLLPTTS 207
DF ++ AG S +HHT LLV PL S++G P P TS
Sbjct: 542 DFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP-SPGTS 581
>DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein
type V alpha subunit protein.
Length = 2016
Score = 31.1 bits (67), Expect = 5.3
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 88 DFQTIQHGRAG*SRAHHTGLLVE-PLFSISSRGNPLLPTTS 207
DF ++ AG S +HHT LLV PL S++G P P TS
Sbjct: 542 DFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP-SPGTS 581
>AY148488-1|AAN61120.1| 2015|Homo sapiens cardiac sodium channel
alpha subunit Nav1.5 protein.
Length = 2015
Score = 31.1 bits (67), Expect = 5.3
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 88 DFQTIQHGRAG*SRAHHTGLLVE-PLFSISSRGNPLLPTTS 207
DF ++ AG S +HHT LLV PL S++G P P TS
Sbjct: 542 DFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP-SPGTS 581
>AB208866-1|BAD92103.1| 1576|Homo sapiens voltage-gated sodium
channel type V alpha isoform b variant protein.
Length = 1576
Score = 31.1 bits (67), Expect = 5.3
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 88 DFQTIQHGRAG*SRAHHTGLLVE-PLFSISSRGNPLLPTTS 207
DF ++ AG S +HHT LLV PL S++G P P TS
Sbjct: 121 DFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP-SPGTS 160
>AB158470-1|BAD12085.1| 1962|Homo sapiens TTX-resistant sodium
channel splicing variant protein.
Length = 1962
Score = 31.1 bits (67), Expect = 5.3
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 88 DFQTIQHGRAG*SRAHHTGLLVE-PLFSISSRGNPLLPTTS 207
DF ++ AG S +HHT LLV PL S++G P P TS
Sbjct: 542 DFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP-SPGTS 581
>AB158469-1|BAD12084.1| 2016|Homo sapiens TTX-resistant sodium
channel protein.
Length = 2016
Score = 31.1 bits (67), Expect = 5.3
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 88 DFQTIQHGRAG*SRAHHTGLLVE-PLFSISSRGNPLLPTTS 207
DF ++ AG S +HHT LLV PL S++G P P TS
Sbjct: 542 DFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP-SPGTS 581
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,339,563
Number of Sequences: 237096
Number of extensions: 3267435
Number of successful extensions: 12256
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12250
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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