Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_L04
(851 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 88 1e-17
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 88 1e-17
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 70 4e-12
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 70 4e-12
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 67 2e-11
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 65 1e-10
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 64 2e-10
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 61 2e-09
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 59 9e-09
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 56 6e-08
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 56 8e-08
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 53 4e-07
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 53 4e-07
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 53 4e-07
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 53 4e-07
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 52 1e-06
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 52 1e-06
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 52 1e-06
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 52 1e-06
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 52 1e-06
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 49 7e-06
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 46 5e-05
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 36 0.071
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 34 0.22
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 88.2 bits (209), Expect = 1e-17
Identities = 52/164 (31%), Positives = 82/164 (50%)
Frame = +2
Query: 86 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXX 265
L+ KL +G P L+ I+++FL++R F + ++S+ R L AGVPQG
Sbjct: 622 LLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFT 681
Query: 266 NDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 445
+DIP++ L+LFADD VY + + S I + +QS L +++KW+I INP K+ A+
Sbjct: 682 HDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAI 741
Query: 446 LFQXXXXXXXXXXXXXXNLTPPITLFSQFIPWARKVKYLGVTLE 577
F L P I W ++YLG+ +
Sbjct: 742 FFTKRRKPRYLPDRQLRILDSP-------IQWVDNIRYLGIIFD 778
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 88.2 bits (209), Expect = 1e-17
Identities = 52/164 (31%), Positives = 82/164 (50%)
Frame = +2
Query: 86 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXX 265
L+ KL +G P L+ I+++FL++R F + ++S+ R L AGVPQG
Sbjct: 570 LLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFT 629
Query: 266 NDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 445
+DIP++ L+LFADD VY + + S I + +QS L +++KW+I INP K+ A+
Sbjct: 630 HDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAI 689
Query: 446 LFQXXXXXXXXXXXXXXNLTPPITLFSQFIPWARKVKYLGVTLE 577
F L P I W ++YLG+ +
Sbjct: 690 FFTKRRKPRYLPDRQLRILDSP-------IQWVDNIRYLGIIFD 726
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 70.1 bits (164), Expect = 4e-12
Identities = 48/162 (29%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Frame = +2
Query: 116 PDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTH 295
P L L+++ FL R+F V+G +SS +P+ AGVPQG +D+P P
Sbjct: 608 PPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVT 667
Query: 296 --------LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 451
+A +ADDT V S++ LQ A QW W + IN K V F
Sbjct: 668 EVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTF 727
Query: 452 QXXXXXXXXXXXXXXNLTPPITLFSQFIPWARKVKYLGVTLE 577
P ++L + I + KYLG+TL+
Sbjct: 728 -----------ANRTGSCPGVSLNGRLIRHHQAYKYLGITLD 758
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 70.1 bits (164), Expect = 4e-12
Identities = 48/162 (29%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Frame = +2
Query: 116 PDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTH 295
P L L+++ FL R+F V+G +SS +P+ AGVPQG +D+P P
Sbjct: 410 PPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVT 469
Query: 296 --------LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 451
+A +ADDT V S++ LQ A QW W + IN K V F
Sbjct: 470 EVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTF 529
Query: 452 QXXXXXXXXXXXXXXNLTPPITLFSQFIPWARKVKYLGVTLE 577
P ++L + I + KYLG+TL+
Sbjct: 530 -----------ANRTGSCPGVSLNGRLIRHHQAYKYLGITLD 560
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 67.3 bits (157), Expect = 2e-11
Identities = 47/164 (28%), Positives = 73/164 (44%)
Frame = +2
Query: 86 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXX 265
L+FK+ + +P+S +++ +L +R F R S+ + AGVPQG
Sbjct: 595 LMFKI-KISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYLIYT 653
Query: 266 NDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 445
DIP + ++ FADDT + SR+ +L + + +W WRI +N K V
Sbjct: 654 ADIPTNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNEQKCKHV 713
Query: 446 LFQXXXXXXXXXXXXXXNLTPPITLFSQFIPWARKVKYLGVTLE 577
F PP+ L S +P A +V YLGV L+
Sbjct: 714 TFTLNRQD-----------CPPLLLNSIPLPKADEVTYLGVHLD 746
Score = 29.5 bits (63), Expect = 6.1
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 25 YTGALFFDVAKAFDKVW 75
Y A+F DV++AFDKVW
Sbjct: 575 YCTAVFLDVSQAFDKVW 591
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 64.9 bits (151), Expect = 1e-10
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Frame = +2
Query: 134 IIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTH------ 295
+++ +L +R F RV + S PR + AGVPQG D+P H
Sbjct: 613 VLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADPRK 672
Query: 296 --LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXX 469
LA +ADD + YSS + A+ LQ L W ++W + +NP K+ F
Sbjct: 673 ALLATYADDIALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKTINPCFTLKTLS 732
Query: 470 XXXXXXXXXNLTPPITLFSQFIPWARKVKYLGVTLE 577
+T PI L + + KYLG+TL+
Sbjct: 733 P---------VTAPIELEGVILDQPSQAKYLGITLD 759
Score = 30.3 bits (65), Expect = 3.5
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 25 YTGALFFDVAKAFDKVWH 78
Y A+F D+ +AFD+VWH
Sbjct: 578 YCNAVFIDMQQAFDRVWH 595
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 64.1 bits (149), Expect = 2e-10
Identities = 45/153 (29%), Positives = 64/153 (41%), Gaps = 5/153 (3%)
Frame = +2
Query: 134 IIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSP-----PTHL 298
+++ +L R F R S+ + AGVPQG +D+P+ + L
Sbjct: 612 LLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGPLLYCLYSHDMPQPDVSLYGKSML 671
Query: 299 ALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXXX 478
A FADD V Y SR + A +Q A +W R+W I IN +KS V F
Sbjct: 672 ATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGINSSKSNNVCF--------- 722
Query: 479 XXXXXXNLTPPITLFSQFIPWARKVKYLGVTLE 577
PP+ + +P KYLGV L+
Sbjct: 723 --TLKRRTPPPVYIEEVPVPQPNAAKYLGVLLD 753
Score = 31.1 bits (67), Expect = 2.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 25 YTGALFFDVAKAFDKVWH 78
Y +LF D+ +AFD+VWH
Sbjct: 577 YCNSLFLDIREAFDRVWH 594
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 61.3 bits (142), Expect = 2e-09
Identities = 46/164 (28%), Positives = 68/164 (41%)
Frame = +2
Query: 86 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXX 265
L+FK+ + +P + +++ +L NR F R + + S + AGVPQG
Sbjct: 593 LLFKIIKL-LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYT 651
Query: 266 NDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 445
D P + FADDT + S+ L ++ +W WRI IN K V
Sbjct: 652 ADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQV 711
Query: 446 LFQXXXXXXXXXXXXXXNLTPPITLFSQFIPWARKVKYLGVTLE 577
F PP+ L + IP A +V YLGV L+
Sbjct: 712 TF-----------TLNKQTCPPLVLNNICIPQADEVTYLGVHLD 744
Score = 30.3 bits (65), Expect = 3.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 25 YTGALFFDVAKAFDKVWHXWFDFQTIQ 105
Y A+F DVA+AFD+VW F+ I+
Sbjct: 573 YCTAIFLDVAQAFDRVWLDGLLFKIIK 599
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 58.8 bits (136), Expect = 9e-09
Identities = 45/164 (27%), Positives = 67/164 (40%)
Frame = +2
Query: 86 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXX 265
L+FK+ + +P + +++ +L N F R + + S + AGVPQG
Sbjct: 593 LLFKIIKL-LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYT 651
Query: 266 NDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 445
D P + FADDT + S+ L ++ +W WRI IN K V
Sbjct: 652 ADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQV 711
Query: 446 LFQXXXXXXXXXXXXXXNLTPPITLFSQFIPWARKVKYLGVTLE 577
F PP+ L + IP A +V YLGV L+
Sbjct: 712 TF-----------TLNKQTCPPLVLNNICIPQADEVTYLGVHLD 744
Score = 30.3 bits (65), Expect = 3.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 25 YTGALFFDVAKAFDKVWHXWFDFQTIQ 105
Y A+F DVA+AFD+VW F+ I+
Sbjct: 573 YCTAIFLDVAQAFDRVWLDGLLFKIIK 599
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 56.0 bits (129), Expect = 6e-08
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Frame = +2
Query: 86 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXX 262
L+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 642 LLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIF 700
Query: 263 XNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRID 418
+D+P R PT L+ +ADDT V S + + ++ + W KW I
Sbjct: 701 SSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWADKWGIS 760
Query: 419 INPAKSTAVLF 451
+N AK+ V+F
Sbjct: 761 VNAAKTGHVIF 771
Score = 31.9 bits (69), Expect = 1.1
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 25 YTGALFFDVAKAFDKVWH 78
Y A+F D+++AFD+VWH
Sbjct: 622 YCSAVFLDISEAFDRVWH 639
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 55.6 bits (128), Expect = 8e-08
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Frame = +2
Query: 86 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXX 262
L+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 654 LLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIF 712
Query: 263 XNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRID 418
+D+P R PT L+ +ADDT V S + + ++ W KW I
Sbjct: 713 SSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWADKWGIS 772
Query: 419 INPAKSTAVLF 451
+N AK+ V+F
Sbjct: 773 VNAAKTGHVIF 783
Score = 31.9 bits (69), Expect = 1.1
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 25 YTGALFFDVAKAFDKVWH 78
Y A+F D+++AFD+VWH
Sbjct: 634 YCSAVFLDISEAFDRVWH 651
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 53.2 bits (122), Expect = 4e-07
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 17/181 (9%)
Frame = +2
Query: 86 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXX 262
L++KL + +P L ++ ++LSNR+F R++G T S + AGVPQG
Sbjct: 198 LLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIY 256
Query: 263 XNDIP-----------RSPPTH-----LALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 394
+D+P P H LA +ADDT + S+ L Q+ +
Sbjct: 257 SSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCR 316
Query: 395 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQFIPWARKVKYLGVTL 574
W +KW I IN K+ +LF TPP+ + Q K +YLG+ L
Sbjct: 317 WSKKWDIAINAKKTGHILFSLKKEQTNI-------YTPPL-INGQRAAKLNKQRYLGLML 368
Query: 575 E 577
+
Sbjct: 369 D 369
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 53.2 bits (122), Expect = 4e-07
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 17/181 (9%)
Frame = +2
Query: 86 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXX 262
L++KL + +P L ++ ++LSNR+F R++G T S + AGVPQG
Sbjct: 645 LLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIY 703
Query: 263 XNDIP-----------RSPPTH-----LALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 394
+D+P P H LA +ADDT + S+ L Q+ +
Sbjct: 704 SSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCR 763
Query: 395 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQFIPWARKVKYLGVTL 574
W +KW I IN K+ +LF TPP+ + Q K +YLG+ L
Sbjct: 764 WSKKWDIAINAKKTGHILFSLKKEQTNI-------YTPPL-INGQRAAKLNKQRYLGLML 815
Query: 575 E 577
+
Sbjct: 816 D 816
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 53.2 bits (122), Expect = 4e-07
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 17/181 (9%)
Frame = +2
Query: 86 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXX 262
L++KL + +P L ++ ++LSNR+F R++G T S + AGVPQG
Sbjct: 645 LLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIY 703
Query: 263 XNDIP-----------RSPPTH-----LALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 394
+D+P P H LA +ADDT + S+ L Q+ +
Sbjct: 704 SSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCR 763
Query: 395 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQFIPWARKVKYLGVTL 574
W +KW I IN K+ +LF TPP+ + Q K +YLG+ L
Sbjct: 764 WSKKWDIAINAKKTGHILFSLKKEQTNI-------YTPPL-INGQRAAKLNKQRYLGLML 815
Query: 575 E 577
+
Sbjct: 816 D 816
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 53.2 bits (122), Expect = 4e-07
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 17/181 (9%)
Frame = +2
Query: 86 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXX 262
L++KL + +P L ++ ++LSNR+F R++G T S + AGVPQG
Sbjct: 645 LLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIY 703
Query: 263 XNDIP-----------RSPPTH-----LALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 394
+D+P P H LA +ADDT + S+ L Q+ +
Sbjct: 704 SSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCR 763
Query: 395 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQFIPWARKVKYLGVTL 574
W +KW I IN K+ +LF TPP+ + Q K +YLG+ L
Sbjct: 764 WSKKWDIAINAKKTGHILFSLKKEQTNI-------YTPPL-INGQRAAKLNKQRYLGLML 815
Query: 575 E 577
+
Sbjct: 816 D 816
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 51.6 bits (118), Expect = 1e-06
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Frame = +2
Query: 86 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXX 262
L+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 526 LLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIF 584
Query: 263 XNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRID 418
+D+P PT L+ +ADDT V S + + ++ W KW I
Sbjct: 585 SSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGIS 644
Query: 419 INPAKSTAVLF 451
+N AK+ V++
Sbjct: 645 VNAAKTGHVIY 655
Score = 31.9 bits (69), Expect = 1.1
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 25 YTGALFFDVAKAFDKVWH 78
Y A+F D+++AFD+VWH
Sbjct: 506 YCSAVFLDISEAFDRVWH 523
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 51.6 bits (118), Expect = 1e-06
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Frame = +2
Query: 86 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXX 262
L+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 642 LLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIF 700
Query: 263 XNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRID 418
+D+P PT L+ +ADDT V S + + ++ W KW I
Sbjct: 701 SSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGIS 760
Query: 419 INPAKSTAVLF 451
+N AK+ V++
Sbjct: 761 VNAAKTGHVIY 771
Score = 31.9 bits (69), Expect = 1.1
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 25 YTGALFFDVAKAFDKVWH 78
Y A+F D+++AFD+VWH
Sbjct: 622 YCSAVFLDISEAFDRVWH 639
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 51.6 bits (118), Expect = 1e-06
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Frame = +2
Query: 86 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXX 262
L+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 642 LLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIF 700
Query: 263 XNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRID 418
+D+P PT L+ +ADDT V S + + ++ W KW I
Sbjct: 701 SSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGIS 760
Query: 419 INPAKSTAVLF 451
+N AK+ V++
Sbjct: 761 VNAAKTGHVIY 771
Score = 31.9 bits (69), Expect = 1.1
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 25 YTGALFFDVAKAFDKVWH 78
Y A+F D+++AFD+VWH
Sbjct: 622 YCSAVFLDISEAFDRVWH 639
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 51.6 bits (118), Expect = 1e-06
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Frame = +2
Query: 86 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXX 262
L+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 604 LLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIF 662
Query: 263 XNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRID 418
+D+P PT L+ +ADDT V S + + ++ W KW I
Sbjct: 663 SSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGIS 722
Query: 419 INPAKSTAVLF 451
+N AK+ V++
Sbjct: 723 VNAAKTGHVIY 733
Score = 31.9 bits (69), Expect = 1.1
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 25 YTGALFFDVAKAFDKVWH 78
Y A+F D+++AFD+VWH
Sbjct: 584 YCSAVFLDISEAFDRVWH 601
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 51.6 bits (118), Expect = 1e-06
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Frame = +2
Query: 86 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXX 262
L+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 642 LLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIF 700
Query: 263 XNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRID 418
+D+P PT L+ +ADDT V S + + ++ W KW I
Sbjct: 701 SSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGIS 760
Query: 419 INPAKSTAVLF 451
+N AK+ V++
Sbjct: 761 VNAAKTGHVIY 771
Score = 31.9 bits (69), Expect = 1.1
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 25 YTGALFFDVAKAFDKVWH 78
Y A+F D+++AFD+VWH
Sbjct: 622 YCSAVFLDISEAFDRVWH 639
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 49.2 bits (112), Expect = 7e-06
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Frame = +2
Query: 86 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXX 265
++ +L G+ L +I+ F++NRSFR R+ S+ L G+PQG
Sbjct: 597 VLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQGSPLSVVLFMIAI 656
Query: 266 NDI----PRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQW 397
DI R +++L+ADD ++ +N + + +K + W
Sbjct: 657 EDINDIVTRHKDIYISLYADDAIIFTKIKNINTVREKFLEILQEINSW 704
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 46.4 bits (105), Expect = 5e-05
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = +2
Query: 86 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXX 265
L+FK+ + +P ++ +++ +L R F R + SS + AGVPQG
Sbjct: 134 LMFKIIQL-LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGPILYTLYT 192
Query: 266 NDIPRSPPTHLALFADDTTVYYSSR 340
DIP + + FADDT + SR
Sbjct: 193 ADIPTNYQLTIFTFADDTAIISRSR 217
Score = 33.1 bits (72), Expect = 0.50
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 25 YTGALFFDVAKAFDKVWHXWFDFQTIQ 105
Y ALF DVA+AFD+VW F+ IQ
Sbjct: 114 YCTALFLDVAQAFDRVWLDGLMFKIIQ 140
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 35.9 bits (79), Expect = 0.071
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 125 LVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQG 229
++ I++F+SNR RV SSP PL G+PQG
Sbjct: 602 IIKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQG 636
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 34.3 bits (75), Expect = 0.22
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 4/119 (3%)
Frame = +2
Query: 104 NMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXN---D 271
N+GVPD + +I ++ +R Y E G RS ++AGVPQG +
Sbjct: 576 NLGVPDYIRGVIGNYFRDRVLWYVTEDGPRS--HQVSAGVPQGSVLGPILWNIMYDGILS 633
Query: 272 IPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 448
I + L FADD + ++ + A A +W K + I K+ VL
Sbjct: 634 ISKPRGVELHCFADDVAITAVAKTIPELQDISNVAITAAIEWLEKVGLKIAAHKTEVVL 692
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,037,926
Number of Sequences: 53049
Number of extensions: 944887
Number of successful extensions: 3004
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2993
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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