Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_L04
(851 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 67 2e-11
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 42 4e-04
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 38 0.012
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 36 0.037
S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein. 29 3.2
S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein. 29 3.2
AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated... 29 3.2
AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated... 29 3.2
AF016688-9|AAN65322.1| 816|Caenorhabditis elegans Hypothetical ... 29 4.2
AF016688-8|AAB66079.2| 848|Caenorhabditis elegans Hypothetical ... 29 4.2
Z81517-3|CAB04210.1| 802|Caenorhabditis elegans Hypothetical pr... 28 9.7
U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1 dual-specif... 28 9.7
U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specif... 28 9.7
U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1 dual-specif... 28 9.7
AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like phos... 28 9.7
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 66.9 bits (156), Expect = 2e-11
Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Frame = +2
Query: 86 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXX 265
L+ KL ++ +L++ + +FLSNRSFR R+ T SS + T GVPQG
Sbjct: 33 LLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCGVPQGAVLSPLLFGIYV 92
Query: 266 NDIPRSPPTHLAL--FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKST 439
NDI P +A FADDT + Y+S K+ LQSA A+ W + ++ +N +K+
Sbjct: 93 NDISSILPEKVACKQFADDTKL-YASTPKTESENNLQSALDAVVDWTKGSKLTLNQSKTV 151
Query: 440 AV 445
V
Sbjct: 152 HV 153
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/114 (23%), Positives = 48/114 (42%)
Frame = +2
Query: 110 GVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPP 289
G+ + L + ++L R R + S L GVPQG D+P
Sbjct: 497 GIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHTLLGGVPQGSVISPNLFTFYLKDMPTQQD 556
Query: 290 THLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 451
T L +ADD ++ + A+K+Q + ++ ++ + I+ KST +F
Sbjct: 557 TMLISYADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGMSISAEKSTVTVF 610
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 37.5 bits (83), Expect = 0.012
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +2
Query: 86 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXX 262
L+ KL + G+ DFLS+R+F +V + P+++GVP+G
Sbjct: 12 LLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGSVSGPFLFLIF 71
Query: 263 XNDIPRSPPTHL--ALFADDTTVYYSS 337
N + S P + + FADD VY S
Sbjct: 72 INSLLLSVPPSISCSAFADDLKVYSHS 98
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3
Query: 273 ISLTNKLNRRGERTEPCGTPAVRGRGEER 187
ISLTN GERT+PCGTP G E+
Sbjct: 50 ISLTNMPKSTGERTDPCGTPHTAFLGSEK 78
>S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein.
Length = 919
Score = 29.5 bits (63), Expect = 3.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 511 RGCEIPPPNTGGNPC 467
R C +PPP GG PC
Sbjct: 296 RACTVPPPMNGGQPC 310
>S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein.
Length = 947
Score = 29.5 bits (63), Expect = 3.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 511 RGCEIPPPNTGGNPC 467
R C +PPP GG PC
Sbjct: 324 RACTVPPPMNGGQPC 338
>AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated
protein 5, isoform b protein.
Length = 567
Score = 29.5 bits (63), Expect = 3.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 511 RGCEIPPPNTGGNPC 467
R C +PPP GG PC
Sbjct: 296 RACTVPPPMNGGQPC 310
>AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated
protein 5, isoform a protein.
Length = 919
Score = 29.5 bits (63), Expect = 3.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 511 RGCEIPPPNTGGNPC 467
R C +PPP GG PC
Sbjct: 296 RACTVPPPMNGGQPC 310
>AF016688-9|AAN65322.1| 816|Caenorhabditis elegans Hypothetical
protein F18A12.8b protein.
Length = 816
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 266 NDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPA 430
ND+P+ +L L D+ YY KS++ + + L + F K DI+PA
Sbjct: 585 NDLPKLDKQYLGLSISDSDTYYYIMKKSVVWMQSREFQ-KLTKPFDKHEFDISPA 638
>AF016688-8|AAB66079.2| 848|Caenorhabditis elegans Hypothetical
protein F18A12.8a protein.
Length = 848
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 266 NDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPA 430
ND+P+ +L L D+ YY KS++ + + L + F K DI+PA
Sbjct: 585 NDLPKLDKQYLGLSISDSDTYYYIMKKSVVWMQSREFQ-KLTKPFDKHEFDISPA 638
>Z81517-3|CAB04210.1| 802|Caenorhabditis elegans Hypothetical
protein F28B1.3 protein.
Length = 802
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 107 MGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLT 211
+ +PD ++I R+ R V GT+SSP PLT
Sbjct: 405 LDLPDHYLMIFREEAHPIFMRRFVNGTQSSPIPLT 439
>U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform c
protein.
Length = 439
Score = 27.9 bits (59), Expect = 9.7
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = -2
Query: 559 VLDLPGPGYELTKESNRGCEIPPPNTG----GNPCGASPLKEHRSTFRWVDVYAP 407
V +LP P EL++ S G E P+T NPC SP+ S+ R V + P
Sbjct: 289 VAELPSPSTELSRLSFNGPEAIAPSTPILNFTNPCFNSPIIPVASSSREVILTLP 343
>U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform b
protein.
Length = 606
Score = 27.9 bits (59), Expect = 9.7
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = -2
Query: 559 VLDLPGPGYELTKESNRGCEIPPPNTG----GNPCGASPLKEHRSTFRWVDVYAP 407
V +LP P EL++ S G E P+T NPC SP+ S+ R V + P
Sbjct: 393 VAELPSPSTELSRLSFNGPEAIAPSTPILNFTNPCFNSPIIPVASSSREVILTLP 447
>U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform a
protein.
Length = 657
Score = 27.9 bits (59), Expect = 9.7
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = -2
Query: 559 VLDLPGPGYELTKESNRGCEIPPPNTG----GNPCGASPLKEHRSTFRWVDVYAP 407
V +LP P EL++ S G E P+T NPC SP+ S+ R V + P
Sbjct: 444 VAELPSPSTELSRLSFNGPEAIAPSTPILNFTNPCFNSPIIPVASSSREVILTLP 498
>AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like
phosphatase 1 protein.
Length = 657
Score = 27.9 bits (59), Expect = 9.7
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = -2
Query: 559 VLDLPGPGYELTKESNRGCEIPPPNTG----GNPCGASPLKEHRSTFRWVDVYAP 407
V +LP P EL++ S G E P+T NPC SP+ S+ R V + P
Sbjct: 444 VAELPSPSTELSRLSFNGPEAIAPSTPILNFTNPCFNSPIIPVASSSREVILTLP 498
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,189,431
Number of Sequences: 27780
Number of extensions: 453053
Number of successful extensions: 1165
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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