Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_J02
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_04_0115 - 16154943-16155335,16155422-16155602,16156188-16156258     31   1.6  
06_02_0203 + 12986685-12988691                                         30   2.8  
06_01_0485 - 3444240-3444398,3444507-3444572,3444644-3444724,344...    30   2.8  
03_05_0476 + 24699911-24699962,24700074-24700290,24701516-247016...    30   2.8  
07_01_0163 + 1149466-1150593,1150733-1150937,1151453-1151485,115...    28   8.6  

>01_04_0115 - 16154943-16155335,16155422-16155602,16156188-16156258
          Length = 214

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = +2

Query: 257 QKVSEYSAYWEQARTLYGPFECTATMKSGNADVYLNEIPGGQY 385
           +KV  +   W++A +LY   EC   + +    +Y N+   G +
Sbjct: 138 KKVGNFCCSWKEANSLYASGECNVDLMAKAQKIYENDFKDGPF 180


>06_02_0203 + 12986685-12988691
          Length = 668

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 174 CPDSPRSPAWALWWLPYRAPPWTLRYRYKR 263
           C  +P + AW LWWL   A PW    R+ R
Sbjct: 42  CCCAPAAAAWVLWWL---AAPWKWVARFGR 68


>06_01_0485 - 3444240-3444398,3444507-3444572,3444644-3444724,
            3444823-3444900,3444980-3445075,3445363-3445405,
            3445498-3445571,3445693-3445781,3445887-3445935,
            3446171-3446227,3446309-3446425,3448633-3448698,
            3449140-3449196,3449271-3449363,3449515-3449662,
            3449753-3449902,3449979-3450181,3450319-3450438,
            3450530-3450694,3450784-3450870,3450951-3451100,
            3451225-3451365,3451399-3451569,3452015-3452091,
            3452175-3452415,3452495-3452758,3452913-3453000,
            3453099-3453481
          Length = 1170

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 25/91 (27%), Positives = 36/91 (39%)
 Frame = +2

Query: 344  NADVYLNEIPGGQYTNLQFQAFSLGLGSQFEEVKKAYREANLLLGDIIKVTPSSKVVGDL 523
            N D+ L  + GG  ++ Q   F  G   Q  E++K +     LL D+      SK+V   
Sbjct: 882  NVDIELG-LQGGMSSSAQ-PGFE-GFFEQVREIEKLHETLTKLLKDLQNSNEESKIVTKA 938

Query: 524  AQFMVQNKLTXXDINAXAXELSFPKSVVEYL 616
            +      K    D+N         KS VE L
Sbjct: 939  SAMKEIKKRMEKDVNEVTKTARLAKSKVEKL 969


>03_05_0476 +
           24699911-24699962,24700074-24700290,24701516-24701682,
           24701786-24701898,24701986-24702206,24702396-24702834
          Length = 402

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = +2

Query: 248 IPLQKVSEYSAYWE--QARTLYGPFECTATMKSGNADVYLNEIPGGQYTNLQFQ 403
           IP+Q+   + A W       L GPF    T  SG   V  N IP G    + +Q
Sbjct: 310 IPMQQ--SWGAVWRLNSGSALQGPFSVRLTFSSGQMFVASNAIPAGWNPGMAYQ 361


>07_01_0163 +
           1149466-1150593,1150733-1150937,1151453-1151485,
           1152244-1153646
          Length = 922

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +2

Query: 458 EANLLLGDIIKVTPSSKVVGDLAQ 529
           E N LLG +I+VT S+ VVG +A+
Sbjct: 680 EENFLLGILIRVTASTNVVGIMAR 703


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,314,586
Number of Sequences: 37544
Number of extensions: 423481
Number of successful extensions: 1106
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)