Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_I18
(871 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 29 0.14
09_02_0327 - 7284829-7284889,7284946-7286126 26 0.55
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533... 25 1.4
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 25 1.9
02_05_0686 - 30900748-30902167,30903442-30904742 29 1.9
08_02_1204 - 25267546-25268219,25268319-25268452,25269567-252696... 24 2.6
01_03_0005 + 11568545-11569119,11569179-11569191 30 2.8
02_05_0173 + 26475074-26476108 29 4.8
04_04_1182 + 31531426-31531702,31533741-31533997,31534672-315348... 28 8.5
04_01_0034 - 401208-402923 28 8.5
01_06_1765 + 39735629-39736240 28 8.5
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 28.7 bits (61), Expect(2) = 0.14
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 828 KKKKXXXXXPPPPPPP 781
KKK+ PPPPPPP
Sbjct: 102 KKKRHHHHHPPPPPPP 117
Score = 26.6 bits (56), Expect(2) = 1.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 826 KKKKXXXXXXPPPPPP 779
KKKK PPPPPP
Sbjct: 101 KKKKRHHHHHPPPPPP 116
Score = 24.2 bits (50), Expect(2) = 0.14
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 801 PPPPPPPXXXXXG 763
PPPPPPP G
Sbjct: 126 PPPPPPPPPPFKG 138
Score = 22.6 bits (46), Expect(2) = 1.5
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1
Query: 796 PPPPPPXXXXGE 761
PPPPPP G+
Sbjct: 128 PPPPPPPPFKGD 139
>09_02_0327 - 7284829-7284889,7284946-7286126
Length = 413
Score = 25.8 bits (54), Expect(2) = 0.55
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 801 PPPPPPPXXXXXGKK 757
PPPPPPP G++
Sbjct: 57 PPPPPPPPPPPRGRR 71
Score = 25.0 bits (52), Expect(2) = 0.55
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 843 PPXXXKKKKXXXXXPPPPPPP 781
P K++ PPPPPPP
Sbjct: 39 PASSYKERIIFGAHPPPPPPP 59
>07_03_1147 +
24349811-24350161,24351031-24351366,24353260-24353376,
24353585-24353647,24354066-24354139,24354216-24354306,
24354791-24354850,24355270-24355462,24356242-24356522,
24357435-24357536,24357664-24357774,24358410-24358475,
24358562-24358660,24358757-24358788,24359171-24359274,
24359380-24359507,24359625-24359756,24360051-24360359,
24360887-24361071,24361161-24361263,24361407-24361552,
24361748-24361827,24361901-24362103
Length = 1121
Score = 25.0 bits (52), Expect(2) = 1.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 801 PPPPPPPXXXXXGKK 757
PPPPPPP G K
Sbjct: 64 PPPPPPPPQPPVGFK 78
Score = 24.2 bits (50), Expect(2) = 1.4
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = -2
Query: 843 PPXXXKKKKXXXXXPPPPPPP 781
PP PPPPPPP
Sbjct: 49 PPQPTLPPPPPRTLPPPPPPP 69
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 24.6 bits (51), Expect(2) = 1.9
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = -2
Query: 843 PPXXXKKKKXXXXXPPPPPPP 781
PP PPPPPPP
Sbjct: 698 PPANRTNGPGVPSAPPPPPPP 718
Score = 24.2 bits (50), Expect(2) = 1.9
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 801 PPPPPPPXXXXXG 763
PPPPPPP G
Sbjct: 714 PPPPPPPANRSNG 726
Score = 23.8 bits (49), Expect(2) = 6.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 801 PPPPPPP 781
PPPPPPP
Sbjct: 666 PPPPPPP 672
Score = 23.8 bits (49), Expect(2) = 5.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 801 PPPPPPP 781
PPPPPPP
Sbjct: 689 PPPPPPP 695
Score = 23.4 bits (48), Expect(2) = 5.2
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -2
Query: 843 PPXXXKKKKXXXXXPPPPPP 784
PP K PPPPPP
Sbjct: 653 PPAPGIGNKFPAPPPPPPPP 672
Score = 23.0 bits (47), Expect(2) = 6.7
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -2
Query: 843 PPXXXKKKKXXXXXPPPPPP 784
PP + PPPPPP
Sbjct: 607 PPPPILPNRSVPPPPPPPPP 626
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/74 (28%), Positives = 21/74 (28%)
Frame = +3
Query: 396 PPXXXXXXXRGAPPPXXXXXGGEXXFPPXKXKXPPXPXGGGXXXXXXXXXXXXXXXXGGG 575
PP APPP PP K PP P G GG
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPP-PPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGG 372
Query: 576 GXXXXXXPPPPPXK 617
PPPPP K
Sbjct: 373 ---KKGGPPPPPPK 383
Score = 24.6 bits (51), Expect(2) = 1.9
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = -2
Query: 843 PPXXXKKKKXXXXXPPPPPPP 781
PP PPPPPPP
Sbjct: 339 PPPKGPPPPPPAKGPPPPPPP 359
Score = 24.2 bits (50), Expect(2) = 1.9
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 801 PPPPPPPXXXXXG 763
PPPPPPP G
Sbjct: 364 PPPPPPPGGKKGG 376
>08_02_1204 -
25267546-25268219,25268319-25268452,25269567-25269661,
25270289-25270304,25270635-25270684,25270960-25271331
Length = 446
Score = 24.2 bits (50), Expect(2) = 2.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 828 KKKKXXXXXPPPPPPP 781
K K PPPPPPP
Sbjct: 86 KGKGVAAAAPPPPPPP 101
Score = 24.2 bits (50), Expect(2) = 2.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 801 PPPPPPPXXXXXG 763
PPPPPPP G
Sbjct: 96 PPPPPPPRCQVEG 108
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = -1
Query: 517 PPPXGXGGXFXXXGGXXXSPPXXXXXGGGAPLXXXXXXXGGXFPQKKXXXP 365
PP G GG GG PP GGG GG +P P
Sbjct: 95 PPYSGGGGGSSTGGGGIYYPPPTGGGGGGGGGWQQGGGGGGAYPTPPPPNP 145
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = -1
Query: 610 GGGGGXXXXXXPPPP-XXXXXXXXXXXXXXXXPPPXGXGG 494
GGGGG PPPP PPP G GG
Sbjct: 82 GGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGG 121
>02_05_0173 + 26475074-26476108
Length = 344
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 801 PPPPPPPXXXXXGKKK 754
PPPPPPP GK+K
Sbjct: 226 PPPPPPPTTSTHGKRK 241
>04_04_1182 +
31531426-31531702,31533741-31533997,31534672-31534818,
31535974-31536111
Length = 272
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 566 GGGGGXXXXXXPPPPXXKXKXK 631
GGGGG PPPP K + K
Sbjct: 55 GGGGGMGIPPRPPPPEIKVRVK 76
>04_01_0034 - 401208-402923
Length = 571
Score = 28.3 bits (60), Expect = 8.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 843 PPXXXKKKKXXXXXPPPPPPP 781
PP ++++ PPPPPPP
Sbjct: 308 PPPPPQQQRAKPSRPPPPPPP 328
>01_06_1765 + 39735629-39736240
Length = 203
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 843 PPXXXKKKKXXXXXPPPPPPP 781
P KKK PPPPPPP
Sbjct: 84 PVICSKKKPEPCSAPPPPPPP 104
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,621,115
Number of Sequences: 37544
Number of extensions: 638921
Number of successful extensions: 14073
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9276
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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