Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_I17
         (892 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    27   0.30 
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    24   2.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.8  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    23   3.7  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   4.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   4.9  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   6.5  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   8.6  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   8.6  

>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 386 IPLPTRRVNTPAPAVRPITMFDQPIPWAPKVKY 484
           +PLP    N P P  RP   F    P+ PK+K+
Sbjct: 21  VPLP----NVPQPGRRPFPTFPGQGPFNPKIKW 49


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 386 IPLPTRRVNTPAPAVRPITMFDQPIPWAPKV 478
           +PLP    N P P  RP   F    P+ PK+
Sbjct: 7   VPLP----NVPQPGRRPFPTFPGQGPFNPKI 33


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 248 ALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLS 385
           A LH  +         W +  +I++NP+ +  V  KR   P+  ++
Sbjct: 825 ATLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIA 870


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 248 ALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLS 385
           A LH  +         W +  +I++NP+ +  V  KR   P+  ++
Sbjct: 821 ATLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIA 866


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +2

Query: 65  SDIESRERVPGPVTSQPESRKAPLSP-RLLFSLYIND 172
           S   S +  PG + +  ES K  LSP  LL S   ND
Sbjct: 889 SQATSVKAEPGSIMAMSESSKKVLSPGELLSSCVSND 925


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 162 ISTIYPGLRRPIWR 203
           + T+YPG+R P +R
Sbjct: 108 LGTLYPGMRAPSFR 121


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 162 ISTIYPGLRRPIWR 203
           + T+YPG+R P +R
Sbjct: 108 LGTLYPGMRAPSFR 121


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +1

Query: 43  DYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPXT 150
           D+L+N +          +P+HV  G PQ   L+  T
Sbjct: 87  DWLANANSPVGSPSAALQPQHVVYGNPQQQQLAAET 122


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 469 GPRYGLVEHRDWANGGG 419
           GPR GL+    W  GGG
Sbjct: 152 GPRNGLLPLLVWIYGGG 168


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 469 GPRYGLVEHRDWANGGG 419
           GPR GL+    W  GGG
Sbjct: 152 GPRNGLLPLLVWIYGGG 168


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 260,684
Number of Sequences: 438
Number of extensions: 6557
Number of successful extensions: 23
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)