Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_I16
(876 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 283 2e-76
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 283 3e-76
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 283 3e-76
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 282 4e-76
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 282 4e-76
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 149 5e-36
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 141 1e-33
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 283 bits (695), Expect = 2e-76
Identities = 132/221 (59%), Positives = 158/221 (71%)
Frame = +1
Query: 19 RLVFQHVAQKIFSTPXMGLWDSIPKRGPXXXXXXXXXXXKTTLANLFI*LLLSGYKAGMT 198
RL ++ + FS P G PK+ K + GYKAGMT
Sbjct: 6 RLKRTDMSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMT 65
Query: 199 HVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDC 378
H+VRE DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+C
Sbjct: 66 HIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEEC 125
Query: 379 RRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQR 558
RRRFYKNWY W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQR
Sbjct: 126 RRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQR 185
Query: 559 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFXQDE 681
QKKAH+MEIQLNGG+IEDKVKWAREHLEKPI V +VF QDE
Sbjct: 186 QKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDE 226
Score = 42.7 bits (96), Expect = 6e-04
Identities = 20/41 (48%), Positives = 21/41 (51%)
Frame = +3
Query: 681 MIDCIXXXXXXXXXXXPSXWHTXKLPR*KXXGLRKXACXGA 803
MIDC+ S WHT KLPR GLRK AC GA
Sbjct: 227 MIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGA 267
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 283 bits (693), Expect = 3e-76
Identities = 130/215 (60%), Positives = 156/215 (72%)
Frame = +1
Query: 37 VAQKIFSTPXMGLWDSIPKRGPXXXXXXXXXXXKTTLANLFI*LLLSGYKAGMTHVVREP 216
++ + FS P G PK+ K + GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 217 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 396
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 397 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 576
NWY W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180
Query: 577 MEIQLNGGTIEDKVKWAREHLEKPIPVDSVFXQDE 681
MEIQLNGG+IEDKVKWAREHLEKPI V +VF QDE
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDE 215
Score = 42.7 bits (96), Expect = 6e-04
Identities = 20/41 (48%), Positives = 21/41 (51%)
Frame = +3
Query: 681 MIDCIXXXXXXXXXXXPSXWHTXKLPR*KXXGLRKXACXGA 803
MIDC+ S WHT KLPR GLRK AC GA
Sbjct: 216 MIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGA 256
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 283 bits (693), Expect = 3e-76
Identities = 130/215 (60%), Positives = 156/215 (72%)
Frame = +1
Query: 37 VAQKIFSTPXMGLWDSIPKRGPXXXXXXXXXXXKTTLANLFI*LLLSGYKAGMTHVVREP 216
++ + FS P G PK+ K + GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 217 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 396
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 397 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 576
NWY W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180
Query: 577 MEIQLNGGTIEDKVKWAREHLEKPIPVDSVFXQDE 681
MEIQLNGG+IEDKVKWAREHLEKPI V +VF QDE
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDE 215
Score = 42.7 bits (96), Expect = 6e-04
Identities = 20/41 (48%), Positives = 21/41 (51%)
Frame = +3
Query: 681 MIDCIXXXXXXXXXXXPSXWHTXKLPR*KXXGLRKXACXGA 803
MIDC+ S WHT KLPR GLRK AC GA
Sbjct: 216 MIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGA 256
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 282 bits (692), Expect = 4e-76
Identities = 123/168 (73%), Positives = 144/168 (85%)
Frame = +1
Query: 178 GYKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWA 357
GYKAGMTH+VRE DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA
Sbjct: 35 GYKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWA 94
Query: 358 EHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQ 537
+H+SE+CRRRFYKNWY W D+LG+KSIE DF+KM+RYC V+RVIAH+Q
Sbjct: 95 QHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQ 154
Query: 538 MKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFXQDE 681
++L+KQRQKKAH+MEIQLNGG+IEDKVKWAREHLEKPI V +VF QDE
Sbjct: 155 IRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDE 202
Score = 71.3 bits (167), Expect = 2e-12
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = +3
Query: 75 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIG 179
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIG
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIG 35
Score = 42.7 bits (96), Expect = 6e-04
Identities = 20/41 (48%), Positives = 21/41 (51%)
Frame = +3
Query: 681 MIDCIXXXXXXXXXXXPSXWHTXKLPR*KXXGLRKXACXGA 803
MIDC+ S WHT KLPR GLRK AC GA
Sbjct: 203 MIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGA 243
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 282 bits (692), Expect = 4e-76
Identities = 123/168 (73%), Positives = 144/168 (85%)
Frame = +1
Query: 178 GYKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWA 357
GYKAGMTH+VRE DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA
Sbjct: 35 GYKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWA 94
Query: 358 EHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQ 537
+H+SE+CRRRFYKNWY W D+LG+KSIE DF+KM+RYC V+RVIAH+Q
Sbjct: 95 QHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQ 154
Query: 538 MKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFXQDE 681
++L+KQRQKKAH+MEIQLNGG+IEDKVKWAREHLEKPI V +VF QDE
Sbjct: 155 IRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDE 202
Score = 71.3 bits (167), Expect = 2e-12
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = +3
Query: 75 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIG 179
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIG
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIG 35
Score = 42.7 bits (96), Expect = 6e-04
Identities = 20/41 (48%), Positives = 21/41 (51%)
Frame = +3
Query: 681 MIDCIXXXXXXXXXXXPSXWHTXKLPR*KXXGLRKXACXGA 803
MIDC+ S WHT KLPR GLRK AC GA
Sbjct: 203 MIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGA 243
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 149 bits (361), Expect = 5e-36
Identities = 69/123 (56%), Positives = 83/123 (67%)
Frame = +1
Query: 37 VAQKIFSTPXMGLWDSIPKRGPXXXXXXXXXXXKTTLANLFI*LLLSGYKAGMTHVVREP 216
++ + FS P G PK+ K + GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 217 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 396
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 397 NWY 405
NWY
Sbjct: 121 NWY 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 141 bits (342), Expect = 1e-33
Identities = 60/74 (81%), Positives = 69/74 (93%)
Frame = +1
Query: 178 GYKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWA 357
GYKAGMTH+VRE DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA
Sbjct: 35 GYKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWA 94
Query: 358 EHMSEDCRRRFYKN 399
+H+SE+CRRRFYKN
Sbjct: 95 QHLSEECRRRFYKN 108
Score = 71.3 bits (167), Expect = 2e-12
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = +3
Query: 75 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIG 179
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIG
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIG 35
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,949,986
Number of Sequences: 53049
Number of extensions: 783342
Number of successful extensions: 1671
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1666
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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