Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_I15
(866 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 31 0.16
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.86
SPAC17G6.02c |||RTA1-like protein|Schizosaccharomyces pombe|chr ... 28 1.5
SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit Pa... 28 1.5
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 1.5
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 2.0
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz... 28 2.0
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 27 2.6
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 2.6
SPAC6G9.11 |syb1||synaptobrevin |Schizosaccharomyces pombe|chr 1... 27 2.6
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 27 3.5
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 3.5
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 27 3.5
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 4.6
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 27 4.6
SPCC74.02c |||mRNA cleavage and polyadenylation specificity fact... 27 4.6
SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual 26 6.0
SPCC1682.08c |||RNA-binding protein Mcp2|Schizosaccharomyces pom... 26 8.0
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 26 8.0
SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyce... 26 8.0
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 31.5 bits (68), Expect = 0.16
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = +2
Query: 539 SPAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLXGVRAGVKASVVIRGSISVSHPLV 718
S IS +ST N FH PT TS S A GV + S+ + + SV+
Sbjct: 801 SRTISTSSTNEYNTSFHAPTVSSTTSSSSTTSLAANKGVNSNSITSLNLESTSSVTSTAY 860
Query: 719 T 721
T
Sbjct: 861 T 861
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 0.86
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 531 SHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPL-SSEAPS 698
S PP+R + P + PP + P PS P P AP PPL +S APS
Sbjct: 1688 STPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP--PPPLPASSAPS 1742
>SPAC17G6.02c |||RTA1-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 324
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 4 WDDLFMEEIVPLXVSAASAIPSLVNAFSSSKPPQTD 111
W D+F + +P+ ++A IPSL A SK P T+
Sbjct: 239 WFDIF--DFIPMIFTSALLIPSLYPALERSKLPFTE 272
>SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit
Par2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 627
Score = 28.3 bits (60), Expect = 1.5
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = +2
Query: 428 TFVGLLLTSQLKESMCWPPLHPLALLSAVSPLCIKPPSPAISATSTRSSNPRFHTPTTPD 607
TF+ ++ TS++K++ +PP +P +VS + P+ +IS+ S S P+ +TP
Sbjct: 106 TFLPVIETSKVKDANHFPPNYPEPKNDSVSSNIDEFPNDSISSASFLSV-PQ----STPP 160
Query: 608 LTSISINPLNAVLXG 652
PLN L G
Sbjct: 161 YLVSQPTPLNKFLAG 175
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 28.3 bits (60), Expect = 1.5
Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = +3
Query: 519 PYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPS 698
P A P L + QP +P + PP PFP P P PP AP
Sbjct: 509 PGAPGMPNLN--MSQPP-MVPPGMALPPGMPAPFPGYPAVPAMPGIPGATAPP---GAPG 562
Query: 699 AYLT--PSSLGMAKGVSPP 749
+Y T S+L GVS P
Sbjct: 563 SYNTSESSNLNAPPGVSMP 581
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.9 bits (59), Expect = 2.0
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 564 PDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAP--SAYLTPSSLGMAKG 737
P P S +PP + P PSIP P +P PP+ S+AP + L P + A
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIP-PP-----SPASAPPIPSKAPPIPSSLPPPAQPAAPV 181
Query: 738 VSPP 749
SPP
Sbjct: 182 KSPP 185
>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 27.9 bits (59), Expect = 2.0
Identities = 25/63 (39%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 313 QSLPNVS--SIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATP 486
QSL N+S S I R N A FPS S +P VDL DV+ E L+TP
Sbjct: 321 QSLGNLSLGSGINQRRQVPRSNSYAGAFPSVVSASLPTKVDLN-HQMDVSDEEQRFLSTP 379
Query: 487 SSS 495
S
Sbjct: 380 LGS 382
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 259 RLYFDLTGTETKSNSVSVQSLPNVSSIIKGYRD-AYLVN 372
R+Y L T ++S + PN S + +GY + A+L+N
Sbjct: 2840 RVYLPLVPTIQANSSADSSNPPNTSFLFRGYHETAWLIN 2878
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.5 bits (58), Expect = 2.6
Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 4/109 (3%)
Frame = +1
Query: 283 TETKSNSVSVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVE 462
T T S + + +S Y + + + S P PVT C T+ V
Sbjct: 482 TSTPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYT 541
Query: 463 GVNVLATPSSSRITIGGLALMHQATLPCDLGYI----NPIIKSPIPYTN 597
V +TP ++ ++ + +T Y P+ +P+ TN
Sbjct: 542 STPVTSTPLATTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTN 590
Score = 27.1 bits (57), Expect = 3.5
Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 5/113 (4%)
Frame = +1
Query: 274 LTGTE-TKSNSVSVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTAD 450
LT T T S SV S P S+ + +V + S P P+T C T+
Sbjct: 422 LTTTNCTTSTSVPYTSTPVTSTPLA---TTNCTTSTSVPYTSTPVTSTPLTTTNCTTSTS 478
Query: 451 VTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYI----NPIIKSPIPYTN 597
+ V +TP ++ ++ + +T Y P+ +P+ TN
Sbjct: 479 IPYTSTPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTN 531
>SPAC6G9.11 |syb1||synaptobrevin |Schizosaccharomyces pombe|chr
1|||Manual
Length = 121
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 524 IRARPPIVMREDEGVASTLTPSTVTSAVVQQRSTVTGILR 405
I A P +R AS+ TP+ T+A+ QQ GI+R
Sbjct: 9 IPAEPSAAVRSGNAAASS-TPNMKTAAIQQQIDDTVGIMR 47
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/58 (24%), Positives = 24/58 (41%)
Frame = +2
Query: 506 SAVSPLCIKPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLXGVRAGVKASV 679
S+ + + A+ ++ S F PTT S+SI+P + V+A V
Sbjct: 56 SSTNSTTLPTQEAAVETNASASHETSFALPTTSPAASLSISPTKSAAVSSEPNVEADV 113
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Frame = +2
Query: 536 PSPAISATSTRSSN---PRFHTPTTPD 607
P P+IS T+T SS H PTTPD
Sbjct: 273 PKPSISTTTTGSSYRSAESSHAPTTPD 299
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 27.1 bits (57), Expect = 3.5
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Frame = +2
Query: 479 PPLHPLAL-LSAVSPLCIKPPSPAISATSTR-------SSNPRFHTPTTPDLTSISINPL 634
PP+H A + V+ + + P P++ A+S + S NP T P T + I P+
Sbjct: 139 PPIHQSAYPQNNVAEVLMPPIPPSVEASSGQNFNQGIASQNPAISTSNLPSTTPLYIPPV 198
Query: 635 N 637
N
Sbjct: 199 N 199
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.6 bits (56), Expect = 4.6
Identities = 21/83 (25%), Positives = 29/83 (34%), Gaps = 3/83 (3%)
Frame = +3
Query: 519 PYASSHPPLRSRLHQPDHQIP-DSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAP 695
P H P P H P + + PP P +P P E + PP P
Sbjct: 261 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 320
Query: 696 SAYLTPSSLGMAKG--VSPPYFK 758
++ P + G + PP FK
Sbjct: 321 GEHMPPPPMHHEPGEHMPPPPFK 343
>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1036
Score = 26.6 bits (56), Expect = 4.6
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 340 IKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 429
+K RD YL NLEA FPS+ +KI +T+D
Sbjct: 378 LKTRRDQYLTNLEA--FPSSLFMKI-LTLD 404
>SPCC74.02c |||mRNA cleavage and polyadenylation specificity factor
complex associated protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 710
Score = 26.6 bits (56), Expect = 4.6
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = +2
Query: 395 PPLASKYQSRLTFVGLL--LTSQLKESM--CWPPLHPLALLSAVSPLCIKPPSPAISATS 562
P +++Y + F+ L L L E + +P L P + SPL K S + S
Sbjct: 24 PHTSNEYSGKPEFINLSPDLEENLDEKLMSAFPGLEPHVFQHSQSPLSHKDASLLATMPS 83
Query: 563 TRSSNP 580
SSNP
Sbjct: 84 VASSNP 89
>SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 26.2 bits (55), Expect = 6.0
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +2
Query: 479 PPLHPLALLSAVSPLCIKPP-SPAISATSTRSSNPRFHTP---TTPDLTSIS 622
PP+ P L +A +PP +P S ++T SSN TP TP L+S S
Sbjct: 149 PPIPPPHLPNASGSSVYQPPYTPFRSVSTTSSSNDTSITPFGDQTPILSSSS 200
>SPCC1682.08c |||RNA-binding protein Mcp2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 703
Score = 25.8 bits (54), Expect = 8.0
Identities = 17/76 (22%), Positives = 34/76 (44%)
Frame = +2
Query: 419 SRLTFVGLLLTSQLKESMCWPPLHPLALLSAVSPLCIKPPSPAISATSTRSSNPRFHTPT 598
S L + L ++ +K + P+ A+ + + S + S R+ +P+F
Sbjct: 151 SSLNYSRKLSSNSIKSTNA--PVFGTAVKNVTGENILSASSSEENLNSNRNGDPKFRFSV 208
Query: 599 TPDLTSISINPLNAVL 646
+P ++S + NP A L
Sbjct: 209 SPWISSSNFNPYEASL 224
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 25.8 bits (54), Expect = 8.0
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 509 PIVMREDEGVASTLTPSTVTSAVVQQRSTVTGILRLGAEGKTTAS 375
P ++E + TL +T+T V + + +L++ AEGK TAS
Sbjct: 507 PEEIKERIAIPKTLI-ATITLPDVSPNAKIELVLQIDAEGKLTAS 550
>SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 357
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 100 GVWKKRKH*PRREWPKRQKRXKAQF 26
G WKK + + EW K ++ KA++
Sbjct: 119 GEWKKAREEDKAEWKKAREEDKAEW 143
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,301,214
Number of Sequences: 5004
Number of extensions: 67771
Number of successful extensions: 301
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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