Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_I12
(868 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 35 0.44
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 35 0.44
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 35 0.44
AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens ... 32 2.4
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 4.1
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 4.1
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 4.1
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 4.1
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 4.1
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 4.1
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 4.1
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 4.1
U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase prot... 31 5.4
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 31 5.4
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 31 5.4
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 31 5.4
BC110648-1|AAI10649.1| 661|Homo sapiens CHD3 protein protein. 31 5.4
AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein. 31 5.4
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 34.7 bits (76), Expect = 0.44
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPG-----LKPPLSLKAPSA 700
P+PA+S TST SS P T TT TS++ TP ++ P P +S+ P+
Sbjct: 266 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAP 324
Query: 701 YLTPSSLV 724
TP V
Sbjct: 325 TATPVQTV 332
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 34.7 bits (76), Expect = 0.44
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPG-----LKPPLSLKAPSA 700
P+PA+S TST SS P T TT TS++ TP ++ P P +S+ P+
Sbjct: 266 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAR 324
Query: 701 YLTPSSLV 724
TP V
Sbjct: 325 TATPVQTV 332
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/73 (28%), Positives = 32/73 (43%)
Frame = +2
Query: 539 SPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSLKAPSAYLTPSS 718
+PA +AT ++ P+ H T P S+ T F P + PP + P +
Sbjct: 321 TPARTATPVQTV-PQPHPQTLPPAVPHSVPQPTTAIPAFPPVMVPPFRVPLPGMPIPLPG 379
Query: 719 LVMAKGVSPPYFK 757
+ M + VS PY K
Sbjct: 380 VAMMQIVSCPYVK 392
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 34.7 bits (76), Expect = 0.44
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPG-----LKPPLSLKAPSA 700
P+PA+S TST SS P T TT TS++ TP ++ P P +S+ P+
Sbjct: 270 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAP 328
Query: 701 YLTPSSLV 724
TP V
Sbjct: 329 TATPVQTV 336
>AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45600 fis, clone BRTHA3020369. ).
Length = 130
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +3
Query: 465 SQCAGHPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQ 605
S C G PF S+ S P++S HP + +H Q P + QPPQ
Sbjct: 85 SNCIG-PFS-SYLTSVSLPHSSIHPSIHPSIHPSFIQTPSGLSQPPQ 129
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase protein.
Length = 2000
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 527 IKPPSPAISATSTRSSNPRFHTPTTPDLTS----ISINPLTPY*KEFAPGLKPPL 679
+ P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL
Sbjct: 1517 LMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPL 1571
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +2
Query: 536 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSLKAPSA 700
PSP + T+T + +P TP TP ++ ++ P T P PP + +P
Sbjct: 977 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 1036
Query: 701 YLTPSSLVMAKGVSPP 748
TPS + PP
Sbjct: 1037 TTTPSPPITTTTTPPP 1052
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPL--TPY*KEFAPGLKPPLSLKAPSAYL 706
PP+ S+ T + +P T TTP T+ +P+ T PP ++ PS
Sbjct: 1051 PPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTT 1110
Query: 707 TPSSLVMAKGVSPP 748
TPS PP
Sbjct: 1111 TPSPPTTTMTTLPP 1124
Score = 30.7 bits (66), Expect = 7.2
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +2
Query: 536 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSLKAPSA 700
PSP + T+T + +P TP TP ++ ++ P T P PP + +P
Sbjct: 898 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 957
Query: 701 YLTPSSLVMAKGVSPP 748
TPS + PP
Sbjct: 958 TTTPSPPTITTTTPPP 973
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSLKAPSAYLTP 712
PP+ S +T + +P T TTP T+ +P+T P P ++ PS TP
Sbjct: 1027 PPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITT-----TPS-PPTTTMTTPSPTTTP 1080
Query: 713 SS 718
SS
Sbjct: 1081 SS 1082
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +2
Query: 536 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSLKAPSA 700
PSP + T+T + +P TP TP ++ ++ P T P PP + +P
Sbjct: 260 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 319
Query: 701 YLTPSSLVMAKGVSPP 748
TPS + PP
Sbjct: 320 TTTPSPPITTTTTPPP 335
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPL--TPY*KEFAPGLKPPLSLKAPSAYL 706
PP+ S+ T + +P T TTP T+ +P+ T PP ++ PS
Sbjct: 334 PPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTT 393
Query: 707 TPSSLVMAKGVSPP 748
TPS PP
Sbjct: 394 TPSPPTTTMTTLPP 407
Score = 30.7 bits (66), Expect = 7.2
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +2
Query: 536 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSLKAPSA 700
PSP + T+T + +P TP TP ++ ++ P T P PP + +P
Sbjct: 181 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 240
Query: 701 YLTPSSLVMAKGVSPP 748
TPS + PP
Sbjct: 241 TTTPSPPTITTTTPPP 256
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSLKAPSAYLTP 712
PP+ S +T + +P T TTP T+ +P+T P P ++ PS TP
Sbjct: 310 PPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITT-----TPS-PPTTTMTTPSPTTTP 363
Query: 713 SS 718
SS
Sbjct: 364 SS 365
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +2
Query: 536 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSLKAPSA 700
PSP + T+T + +P TP TP ++ ++ P T P PP + +P
Sbjct: 1602 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 1661
Query: 701 YLTPSSLVMAKGVSPP 748
TPS + PP
Sbjct: 1662 TTTPSPPITTTTTPPP 1677
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPL--TPY*KEFAPGLKPPLSLKAPSAYL 706
PP+ S+ T + +P T TTP T+ +P+ T PP ++ PS
Sbjct: 1676 PPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTT 1735
Query: 707 TPSSLVMAKGVSPP 748
TPS PP
Sbjct: 1736 TPSPPTTTMTTLPP 1749
Score = 30.7 bits (66), Expect = 7.2
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +2
Query: 536 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PY*KEFAPGLKPPLSLKAPSA 700
PSP + T+T + +P TP TP ++ ++ P T P PP + +P
Sbjct: 1523 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 1582
Query: 701 YLTPSSLVMAKGVSPP 748
TPS + PP
Sbjct: 1583 TTTPSPPTITTTTPPP 1598
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSLKAPSAYLTP 712
PP+ S +T + +P T TTP T+ +P+T P P ++ PS TP
Sbjct: 1652 PPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITT-----TPS-PPTTTMTTPSPTTTP 1705
Query: 713 SS 718
SS
Sbjct: 1706 SS 1707
>BC110648-1|AAI10649.1| 661|Homo sapiens CHD3 protein protein.
Length = 661
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 527 IKPPSPAISATSTRSSNPRFHTPTTPDLTS----ISINPLTPY*KEFAPGLKPPL 679
+ P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL
Sbjct: 178 LMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPL 232
>AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein.
Length = 1944
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 527 IKPPSPAISATSTRSSNPRFHTPTTPDLTS----ISINPLTPY*KEFAPGLKPPL 679
+ P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL
Sbjct: 1517 LMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPL 1571
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,191,404
Number of Sequences: 237096
Number of extensions: 2623310
Number of successful extensions: 6628
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6597
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -