Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_I04
         (841 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0154 + 5967512-5967658,5968206-5968652,5968766-5968846,596...    80   2e-15
01_05_0085 - 17995800-17995985,17996724-17996823,17996919-179971...    75   7e-14
02_04_0559 + 23869791-23869907,23869993-23872131,23872235-238723...    29   6.1  

>03_02_0154 +
           5967512-5967658,5968206-5968652,5968766-5968846,
           5969058-5969075,5969552-5969748,5969844-5969943,
           5970676-5970861
          Length = 391

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 35/64 (54%), Positives = 47/64 (73%)
 Frame = +1

Query: 61  FLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYDNFLTT 240
           F+  ++ + P LA  +A L +LY +KLWHQLTLKL  F++ PA Q GD LIQLY+NF+T 
Sbjct: 5   FVESQREARPELADPYADLADLYQRKLWHQLTLKLDHFLQLPAAQTGDTLIQLYNNFITD 64

Query: 241 FESK 252
           FE+K
Sbjct: 65  FETK 68


>01_05_0085 -
           17995800-17995985,17996724-17996823,17996919-17997115,
           17997836-17997916,17998046-17998492,17998774-17998920
          Length = 385

 Score = 74.9 bits (176), Expect = 7e-14
 Identities = 32/64 (50%), Positives = 47/64 (73%)
 Frame = +1

Query: 61  FLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYDNFLTT 240
           ++  ++ + P LA  +A L +LY +KLWHQLTLKL  F++ PA Q GD +IQLY+NF++ 
Sbjct: 5   YVEAQRQARPDLADAYADLADLYQRKLWHQLTLKLDHFLQLPAAQTGDTIIQLYNNFISD 64

Query: 241 FESK 252
           FE+K
Sbjct: 65  FETK 68


>02_04_0559 +
           23869791-23869907,23869993-23872131,23872235-23872336,
           23872720-23872773,23872804-23872899
          Length = 835

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +1

Query: 115 LEELY-NKKLWHQLTLKLQEFVKNPALQRGDNLIQLYDNFL 234
           L  LY +++LW    LK Q +      QRG++++  YD F+
Sbjct: 425 LSSLYEHRQLWAPAYLKGQFWAGMSVSQRGESIVSYYDGFV 465


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,180,185
Number of Sequences: 37544
Number of extensions: 236798
Number of successful extensions: 360
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)