Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_I04
         (841 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061232-1|AAL28780.1|  382|Drosophila melanogaster LD17530p pro...    77   4e-14
AF145311-1|AAF08392.1|  382|Drosophila melanogaster 26S proteaso...    77   4e-14
AE014297-3373|AAF56174.1|  382|Drosophila melanogaster CG10230-P...    77   4e-14
AE014297-3372|AAF56173.1|  382|Drosophila melanogaster CG10230-P...    77   4e-14

>AY061232-1|AAL28780.1|  382|Drosophila melanogaster LD17530p
           protein.
          Length = 382

 Score = 76.6 bits (180), Expect = 4e-14
 Identities = 33/62 (53%), Positives = 48/62 (77%)
 Frame = +1

Query: 67  TKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYDNFLTTFE 246
           T+K+ +   LAA+W  +EELYN+KLW++LT+KL  FV++ +LQ    L+QLY NFL+TFE
Sbjct: 14  TQKKTTNKELAAEWTLIEELYNEKLWNELTIKLVTFVRHESLQDETALLQLYQNFLSTFE 73

Query: 247 SK 252
           +K
Sbjct: 74  TK 75


>AF145311-1|AAF08392.1|  382|Drosophila melanogaster 26S proteasome
           regulatory complexsubunit p39A protein.
          Length = 382

 Score = 76.6 bits (180), Expect = 4e-14
 Identities = 33/62 (53%), Positives = 48/62 (77%)
 Frame = +1

Query: 67  TKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYDNFLTTFE 246
           T+K+ +   LAA+W  +EELYN+KLW++LT+KL  FV++ +LQ    L+QLY NFL+TFE
Sbjct: 14  TQKKTTNKELAAEWTLIEELYNEKLWNELTIKLVTFVRHESLQDETALLQLYQNFLSTFE 73

Query: 247 SK 252
           +K
Sbjct: 74  TK 75


>AE014297-3373|AAF56174.1|  382|Drosophila melanogaster CG10230-PB,
           isoform B protein.
          Length = 382

 Score = 76.6 bits (180), Expect = 4e-14
 Identities = 33/62 (53%), Positives = 48/62 (77%)
 Frame = +1

Query: 67  TKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYDNFLTTFE 246
           T+K+ +   LAA+W  +EELYN+KLW++LT+KL  FV++ +LQ    L+QLY NFL+TFE
Sbjct: 14  TQKKTTNKELAAEWTLIEELYNEKLWNELTIKLVTFVRHESLQDETALLQLYQNFLSTFE 73

Query: 247 SK 252
           +K
Sbjct: 74  TK 75


>AE014297-3372|AAF56173.1|  382|Drosophila melanogaster CG10230-PA,
           isoform A protein.
          Length = 382

 Score = 76.6 bits (180), Expect = 4e-14
 Identities = 33/62 (53%), Positives = 48/62 (77%)
 Frame = +1

Query: 67  TKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYDNFLTTFE 246
           T+K+ +   LAA+W  +EELYN+KLW++LT+KL  FV++ +LQ    L+QLY NFL+TFE
Sbjct: 14  TQKKTTNKELAAEWTLIEELYNEKLWNELTIKLVTFVRHESLQDETALLQLYQNFLSTFE 73

Query: 247 SK 252
           +K
Sbjct: 74  TK 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,357,025
Number of Sequences: 53049
Number of extensions: 393162
Number of successful extensions: 913
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)