Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_H22
(907 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 64 1e-12
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 59 5e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 56 6e-10
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 55 8e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 55 8e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 55 1e-09
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 54 2e-09
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 53 3e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 53 3e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 52 5e-09
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 52 5e-09
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 51 1e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 51 2e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 50 3e-08
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 50 3e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 50 4e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 49 5e-08
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 49 7e-08
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 49 7e-08
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 48 9e-08
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 48 1e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 48 2e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 46 4e-07
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 43 4e-06
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 34 0.002
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 31 0.014
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 29 0.077
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 5.1
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 6.7
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 64.5 bits (150), Expect = 1e-12
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 10/163 (6%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQTDLQMNW 286
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 287 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 457
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 458 KRLDISTPISMQLDNWPNDMQTCTVQVRVLGCT---IVTKWIS 577
RL I M L+N+P D Q C +Q G T ++ KW S
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGSFGYTKRDVIYKWNS 164
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 59.3 bits (137), Expect = 5e-11
Identities = 46/153 (30%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Frame = +2
Query: 95 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 253
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 254 VRIQTDLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 427
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 428 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
+ G V W + + + +P D QTC
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTC 159
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 55.6 bits (128), Expect = 6e-10
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Frame = +2
Query: 113 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLT--LHLRHANIRESESTVRIQTD---LQ 277
C + D LL+ Y++ P + LT + L+ + + + +I T ++
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVE 78
Query: 278 MNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVS 451
+W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G V
Sbjct: 79 QSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 138
Query: 452 WIKRLDISTPISMQLDNWPNDMQTCTVQ 535
W + + ++ +P D QTC ++
Sbjct: 139 WKPPAIYKSSCEIDVEYFPFDEQTCVMK 166
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 55.2 bits (127), Expect = 8e-10
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Frame = +2
Query: 113 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQTDLQ 277
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 278 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 448
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 449 SWIKRLDISTPISMQLDN--WPNDMQTCTVQV 538
+ TP+ + D+ WP D+ CT+ +
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHI 177
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 55.2 bits (127), Expect = 8e-10
Identities = 39/143 (27%), Positives = 74/143 (51%), Gaps = 10/143 (6%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQTD---LQMNWIDKRLS 304
+ D LL+ Y++ P ++ V+ + + L+ + + + +I T ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 305 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 469
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 470 ISTPISMQLDNWPNDMQTCTVQV 538
+ S+ ++ +P D+QTC +++
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKL 171
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 54.8 bits (126), Expect = 1e-09
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQTD---LQMNWIDKRLS 304
+ D LL+ Y++ P ++ V+ + + L+ + + + +I T ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 305 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDIST 478
W E+G L V S+ +WRPD+VL NA A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 479 PISMQLDNWPNDMQTCTVQ 535
+ ++ +P D QTC ++
Sbjct: 152 SCEIDVEYFPFDEQTCVLK 170
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 53.6 bits (123), Expect = 2e-09
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 10/142 (7%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLT--LHLRHANIRESESTVRIQTD---LQMNWIDKRLS 304
+ D LL+ Y+R P LT L L+ + + E ++ T ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 305 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 469
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 470 ISTPISMQLDNWPNDMQTCTVQ 535
+ + ++ +P D Q+C ++
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMK 175
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 53.2 bits (122), Expect = 3e-09
Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRIQTDLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 364
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 365 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTV 532
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC +
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 533 Q 535
+
Sbjct: 168 K 168
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 53.2 bits (122), Expect = 3e-09
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 12/160 (7%)
Frame = +2
Query: 83 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 241
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 242 SESTVRIQTDLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 418
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 419 ----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
+A + + G V W + + ++ +P D QTC
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTC 159
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 52.4 bits (120), Expect = 5e-09
Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
Frame = +2
Query: 128 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQTDLQMNWID 292
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 293 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 463
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 464 LDISTPISMQLDNWPNDMQTCTVQVRVLGCTIV 562
L I M+L N+P D Q+C + + C V
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGSCKCIYV 188
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 52.4 bits (120), Expect = 5e-09
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQTDLQMNW 286
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 287 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 439
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 440 GSVSWIKRLDISTPISMQLDNWPNDMQTCTVQVRVLGCTI 559
GS++ RL I+ M L +P D Q C +++ G T+
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 163
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 51.2 bits (117), Expect = 1e-08
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQTDLQMNW 286
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 287 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 439
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 440 GSVSWIKRLDISTPISMQLDNWPNDMQTCTVQVRVLGCTI 559
GS++ RL I+ M L +P D Q C +++ G T+
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 163
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 50.8 bits (116), Expect = 2e-08
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 3/117 (2%)
Frame = +2
Query: 194 IVVNLTLHLRHANIRESESTVRIQTDLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 370
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 371 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTVQ 535
+L N A + VS+ G V W+ + + ++ +P D Q C ++
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLK 148
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 50.0 bits (114), Expect = 3e-08
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +2
Query: 230 NIRESESTVRIQTDLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTVQ 535
G Y V++NGS ++ + + + +P D Q C ++
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMK 196
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 50.0 bits (114), Expect = 3e-08
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +2
Query: 230 NIRESESTVRIQTDLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTVQ 535
G Y V++NGS ++ + + + +P D Q C ++
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMK 196
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 50.0 bits (114), Expect = 3e-08
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Frame = +2
Query: 74 RFLLTCAIASAAE--CENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-N 232
R+ L AIA AA + +++ LL TY+ P +V++ L L +
Sbjct: 3 RWTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIID 62
Query: 233 IRESESTVRIQTDLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAG 406
+ E + L++ W D + WN ++G L + RLW+PDV++ N+A G
Sbjct: 63 VDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDG 122
Query: 407 DYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTVQ 535
Y V NNG+ ++ + + + +P D Q C ++
Sbjct: 123 TYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMK 165
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 49.6 bits (113), Expect = 4e-08
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +2
Query: 230 NIRESESTVRIQTDLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTVQ 535
G Y V++NGS ++ + + + +P D Q C ++
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMK 128
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 49.2 bits (112), Expect = 5e-08
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQTDLQMNWIDKR 298
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 299 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 463
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 464 LDISTPISMQLDNWPNDMQTCTVQVRVLGCT 556
+ ++ M L +P D Q C++++ G T
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWT 184
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 48.8 bits (111), Expect = 7e-08
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +2
Query: 230 NIRESESTVRIQTDLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTVQ 535
G Y V+++GS ++ + M + +P D Q C ++
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMK 128
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 48.8 bits (111), Expect = 7e-08
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 8/164 (4%)
Frame = +2
Query: 65 FCYRFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHAN 232
F + +LL C ++ T+L + L YD + P S +I N+T+ L +
Sbjct: 27 FGFSYLLNCK-----NYDHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLME 81
Query: 233 IRESESTVRIQTDLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT--- 400
+ S + + + + + W D LSW ++ G + V S+ +W PD+ + N+ T
Sbjct: 82 FDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQ 141
Query: 401 AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTV 532
G V ++GSVS + + + +WP D C +
Sbjct: 142 TGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 48.4 bits (110), Expect = 9e-08
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +2
Query: 230 NIRESESTVRIQTDLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTVQ 535
G Y V+++GS ++ + M + +P D Q C ++
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMK 128
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 48.0 bits (109), Expect = 1e-07
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +2
Query: 233 IRESESTVRIQTDLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 412
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 413 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTVQVRVLGCTIV 562
R R+S +GSV++ R + M L +P D Q CTV++ G T++
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVL 187
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 47.6 bits (108), Expect = 2e-07
Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +2
Query: 230 NIRESESTVRIQTDLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTVQ 535
G Y V+++GS ++ + + + +P D Q C ++
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMK 128
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +2
Query: 230 NIRESESTVRIQTDLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTVQ 535
G Y V+++GS ++ + + + +P D Q C ++
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMK 128
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +2
Query: 230 NIRESESTVRIQTDLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTVQ 535
G Y V+++GS ++ + + + +P D Q C ++
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMK 128
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 46.4 bits (105), Expect = 4e-07
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQTDLQMNWIDKR 298
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 299 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 463
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 464 LDISTPISMQLDNWPNDMQTCTVQVRVLGCT 556
+ ++ M L +P D Q C++++ G T
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWT 184
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 42.7 bits (96), Expect = 4e-06
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Frame = +2
Query: 284 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 436
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 437 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTVQVRVLGCTI 559
+GS++ RL I+ M L +P D Q C +++ G T+
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 102
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 33.9 bits (74), Expect = 0.002
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Frame = +2
Query: 230 NIRESESTVRIQTDLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 403
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 404 GDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTVQVRVLGCT 556
+ ++ + ++ ++ ++ +L + +M+ +++P+D Q C++ + L T
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHT 156
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 31.1 bits (67), Expect = 0.014
Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Frame = +2
Query: 194 IVVNLTLHLRHAN-IRESESTVRIQTDLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 355
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 356 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNDMQ 520
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 521 TCTVQV 538
C + +
Sbjct: 129 ICPIYI 134
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 28.7 bits (61), Expect = 0.077
Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +2
Query: 350 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 520
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 521 TCTVQVRVLGCT 556
C +Q+ L T
Sbjct: 176 ECKLQMESLSHT 187
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 5.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 337 PSAAAPLPCVPTQS 296
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 6.7
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 136 GQ*CCVFAFCRTSYSTSEEKPVTE 65
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,308
Number of Sequences: 438
Number of extensions: 4316
Number of successful extensions: 78
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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