Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_H07
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 54 1e-07
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 54 1e-07
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 54 1e-07
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 53 3e-07
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 52 6e-07
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 52 6e-07
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 52 6e-07
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 51 1e-06
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 51 1e-06
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 51 1e-06
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 50 3e-06
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 50 3e-06
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 50 3e-06
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 50 3e-06
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 50 3e-06
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 50 3e-06
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 50 3e-06
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 50 3e-06
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 50 3e-06
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 48 7e-06
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 48 7e-06
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 47 2e-05
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 46 3e-05
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 45 6e-05
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 45 6e-05
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 45 8e-05
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 45 8e-05
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 44 1e-04
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 44 1e-04
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 44 2e-04
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 44 2e-04
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 44 2e-04
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 44 2e-04
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 44 2e-04
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 43 3e-04
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 43 3e-04
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 42 6e-04
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 42 6e-04
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 42 8e-04
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 41 0.001
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 41 0.001
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 41 0.001
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 41 0.001
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 40 0.002
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 40 0.002
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 40 0.002
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 40 0.002
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 40 0.002
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 40 0.002
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 40 0.002
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 40 0.002
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 39 0.004
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 39 0.004
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 39 0.004
AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ... 39 0.004
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 39 0.006
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 38 0.007
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 38 0.007
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 38 0.010
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 38 0.010
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 37 0.017
AF498370-1|AAN65376.1| 550|Caenorhabditis elegans GABA-A recept... 37 0.017
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 37 0.022
Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical pr... 36 0.030
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 36 0.030
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 36 0.039
Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical pr... 36 0.052
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 36 0.052
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 36 0.052
U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic acety... 36 0.052
U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic acety... 36 0.052
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 36 0.052
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 36 0.052
AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ... 35 0.068
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 35 0.068
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 35 0.068
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 35 0.090
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 34 0.12
AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical ... 34 0.12
U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine r... 34 0.16
AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine ... 34 0.16
AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine ... 34 0.16
Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical p... 33 0.21
AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic ace... 33 0.21
Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 33 0.28
U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 33 0.28
AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine... 33 0.28
AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholin... 33 0.28
Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.48
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 32 0.48
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 32 0.48
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 32 0.48
Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical ... 31 1.1
Z81085-2|CAB03114.2| 618|Caenorhabditis elegans Hypothetical pr... 30 1.9
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 30 1.9
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 30 1.9
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 1.9
Z83120-8|CAE46678.2| 511|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z83120-7|CAB51466.2| 514|Caenorhabditis elegans Hypothetical pr... 30 2.6
AY523515-1|AAR98637.1| 553|Caenorhabditis elegans acetylcholine... 30 2.6
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 30 2.6
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 29 4.5
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 4.5
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 29 4.5
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 5.9
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 29 5.9
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 5.9
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 5.9
Z81125-6|CAI79225.1| 234|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z81125-5|CAB03381.2| 398|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical pr... 28 7.8
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 28 7.8
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 28 7.8
AF408760-1|AAO27839.1| 318|Caenorhabditis elegans unknown prote... 28 7.8
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 54.4 bits (125), Expect = 1e-07
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Frame = +1
Query: 139 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 315
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 316 EWG--CSTWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSV 447
+G TW + +++W PD+++ N A A+R AR+ NG++
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTI 176
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 54.4 bits (125), Expect = 1e-07
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Frame = +1
Query: 139 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 315
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 316 EWG--CSTWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSV 447
+G TW + +++W PD+++ N A A+R AR+ NG++
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTI 176
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 54.4 bits (125), Expect = 1e-07
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Frame = +1
Query: 139 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 315
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 316 EWG--CSTWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSV 447
+G TW + +++W PD+++ N A A+R AR+ NG++
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTI 176
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 54.0 bits (124), Expect = 1e-07
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Frame = +1
Query: 46 MSTTYIILLPFLLTCAIASAAECENAT-SLSLMIDSLLATYDRESPPDSKIVVNLTLHLR 222
M +++ + F+ T + A E S S + LL +++ SPPD ++ ++ + L
Sbjct: 41 MQCSFLTIFIFITTVTVGVAEFSEQYQGSSSRLTRHLLEKHNKCSPPDGRVDISHNIELV 100
Query: 223 HA-NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCS-TWLVSSERLWRPDVVLLNAAA 393
H I E +++L + W D LSW E+ G TWL +W PD+++ N
Sbjct: 101 HIIGINELNQNMQVLVYIVQQWTDASLSWKVEEFRGIKHTWL-PEHSIWIPDIIVFNTLE 159
Query: 394 TTAGDYALRA--RVSNNGSVSW 453
A+R+ +VS G V++
Sbjct: 160 HKMLLEAVRSPIKVSYTGEVTY 181
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 52.8 bits (121), Expect = 3e-07
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 7/133 (5%)
Frame = +1
Query: 76 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHL-RHANIRE 240
FLL I +S ++++LL Y++ P + V +L R ++ E
Sbjct: 11 FLLVIFILHIVTINANKHVSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDE 70
Query: 241 SESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYA 414
+ L+M W DK+L+WN +WG ++ + S+++W PD+VL NA
Sbjct: 71 VNQVLTTSLWLEMQWYDKKLTWNPTDWGGVEYIHIPSDQIWIPDIVLYNNADGEPHITIT 130
Query: 415 LRARVSNNGSVSW 453
A++ ++G V W
Sbjct: 131 SLAKIDHHGRVVW 143
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 52.0 bits (119), Expect = 6e-07
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Frame = +1
Query: 55 TYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLR 222
++ + L LL C I+ E + D L+ Y+R + P+ + + L L L
Sbjct: 3 SFWLFLLLLLFC-ISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLS 61
Query: 223 HA-NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAAT 396
++ E + + L+ WID++LSW+ + G + V E +W PD+VL N A +
Sbjct: 62 QIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYNNADS 121
Query: 397 TAG-DYALRARVSNNGSVSW 453
+ +A + G V+W
Sbjct: 122 NYNITISTKATLHYTGEVTW 141
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 52.0 bits (119), Expect = 6e-07
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Frame = +1
Query: 55 TYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLR 222
++ + L LL C I+ E + D L+ Y+R + P+ + + L L L
Sbjct: 3 SFWLFLLLLLFC-ISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLS 61
Query: 223 HA-NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAAT 396
++ E + + L+ WID++LSW+ + G + V E +W PD+VL N A +
Sbjct: 62 QIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYNNADS 121
Query: 397 TAG-DYALRARVSNNGSVSW 453
+ +A + G V+W
Sbjct: 122 NYNITISTKATLHYTGEVTW 141
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 52.0 bits (119), Expect = 6e-07
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Frame = +1
Query: 55 TYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLR 222
++ + L LL C I+ E + D L+ Y+R + P+ + + L L L
Sbjct: 3 SFWLFLLLLLFC-ISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLS 61
Query: 223 HA-NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAAT 396
++ E + + L+ WID++LSW+ + G + V E +W PD+VL N A +
Sbjct: 62 QIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYNNADS 121
Query: 397 TAG-DYALRARVSNNGSVSW 453
+ +A + G V+W
Sbjct: 122 NYNITISTKATLHYTGEVTW 141
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +1
Query: 139 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 315
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 316 EWG--CSTWLVSSERLWRPDVVLLN 384
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +1
Query: 139 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 315
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 316 EWG--CSTWLVSSERLWRPDVVLLN 384
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +1
Query: 139 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 315
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 316 EWG--CSTWLVSSERLWRPDVVLLN 384
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 49.6 bits (113), Expect = 3e-06
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +1
Query: 229 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL-NAAATTA 402
N+ E ++ L M W D +L+WN E+G S V S+R+W PD+VL NA
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNADGNYE 158
Query: 403 GDYALRARVSNNGSVSWI 456
+ V ++G V+W+
Sbjct: 159 VSFKSNVFVDHHGDVTWV 176
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 49.6 bits (113), Expect = 3e-06
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +1
Query: 79 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 243
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 244 ESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT-AGDYAL 417
V + A L W D L W+ E+G T + + ++W+PDV+L N+ T Y
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQT 125
Query: 418 RARVSNNGSVSWI 456
V + G V W+
Sbjct: 126 NMIVYSTGLVHWV 138
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT--AGDYALRARVSNNG 441
L +NW+D RLSWN W + R+W+PD++L+N A A + V+++G
Sbjct: 165 LNINWMDPRLSWNESLWSEIKAIYIPHARIWKPDIILVNNAIREYYASLVSTDVMVTSDG 224
Query: 442 SVSWI 456
+V+W+
Sbjct: 225 NVTWL 229
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 49.6 bits (113), Expect = 3e-06
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +1
Query: 229 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL-NAAATTA 402
N+ E ++ L M W D +L+WN E+G S V S+R+W PD+VL NA
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNADGNYE 158
Query: 403 GDYALRARVSNNGSVSWI 456
+ V ++G V+W+
Sbjct: 159 VSFKSNVFVDHHGDVTWV 176
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 49.6 bits (113), Expect = 3e-06
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +1
Query: 79 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 243
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 244 ESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT-AGDYAL 417
V + A L W D L W+ E+G T + + ++W+PDV+L N+ T Y
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQT 125
Query: 418 RARVSNNGSVSWI 456
V + G V W+
Sbjct: 126 NMIVYSTGLVHWV 138
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 49.6 bits (113), Expect = 3e-06
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Frame = +1
Query: 139 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 303
+ + L+A Y++ P S+ +VV L L ++ E + LQ +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 304 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 453
W+ E+G V S+ +W PDVVL N A G+Y + +A+++ NG+V W
Sbjct: 90 WDPVEYGGVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEW 141
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 49.6 bits (113), Expect = 3e-06
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +1
Query: 79 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 243
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 244 ESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT-AGDYAL 417
V + A L W D L W+ E+G T + + ++W+PDV+L N+ T Y
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQT 125
Query: 418 RARVSNNGSVSWI 456
V + G V W+
Sbjct: 126 NMIVYSTGLVHWV 138
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 49.6 bits (113), Expect = 3e-06
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +1
Query: 79 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 243
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 244 ESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT-AGDYAL 417
V + A L W D L W+ E+G T + + ++W+PDV+L N+ T Y
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQT 125
Query: 418 RARVSNNGSVSWI 456
V + G V W+
Sbjct: 126 NMIVYSTGLVHWV 138
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 49.6 bits (113), Expect = 3e-06
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Frame = +1
Query: 139 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 303
+ + L+A Y++ P S+ +VV L L ++ E + LQ +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 304 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 453
W+ E+G V S+ +W PDVVL N A G+Y + +A+++ NG+V W
Sbjct: 90 WDPVEYGGVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEW 141
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 48.4 bits (110), Expect = 7e-06
Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 2/133 (1%)
Frame = +1
Query: 100 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQM 279
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 280 NWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATT-AGDYALRARVSN-NGSVSW 453
+W D +SW+ +WG S ++W P++V +N +T+ G + +N G +
Sbjct: 114 SWNDTMVSWDKEQWGLSWLNFYWIQIWTPNIVQINGGSTSNPGQVTSKVLAANYTGQIYL 173
Query: 454 IKRLDISTPISMQ 492
+TP Q
Sbjct: 174 WSDFSFTTPFRFQ 186
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 48.4 bits (110), Expect = 7e-06
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +1
Query: 229 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTA 402
++ E + + + L +W+D RLSWN E+G T + E LW PD++L NA +
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEMLWLPDIILYNNAHGSPW 103
Query: 403 GDYALRARVSNNGSVSW 453
+ VS G V+W
Sbjct: 104 VSETTQVHVSFEGRVTW 120
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 163 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL- 339
YD E+P + L +L+ ++E + + ++ ++ W D RLSWNA W +T +
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTTMIY 122
Query: 340 VSSERLWRPDV 372
+ +++W P +
Sbjct: 123 MKQDKVWSPTI 133
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 46.4 bits (105), Expect = 3e-05
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Frame = +1
Query: 64 ILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSK--IVVNLTLHLRHA- 228
+LLP LL + + + + +I+ L++ Y RE P DS +VV+L + L+
Sbjct: 1 MLLPILLHFLLL-ITQLNGSPAEVRLINDLMSGYVREERPTLDSSKPVVVSLGVFLQQII 59
Query: 229 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTA 402
N+ E E + + A L+ W D+ L W + T L + LW PD++L N+ +
Sbjct: 60 NLSEKEEQLEVNAWLKFQWRDENLRWEPTAYENVTDLRHPPDALWTPDILLYNSVDSEFD 119
Query: 403 GDYALRARVSNNGSVSWI 456
Y + + G+++W+
Sbjct: 120 SSYKVNLVNYHTGNINWM 137
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 45.2 bits (102), Expect = 6e-05
Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Frame = +1
Query: 67 LLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRHA-N 231
L+ +L+ I + C+ + + + + LL Y+ P + V + L L+ +
Sbjct: 5 LINSILSLVIIHSNLCDGSVAETKLFTDLLKGYNPLERPVQNSSQPLEVKIKLFLQQILD 64
Query: 232 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLV---SSERLWRPDVVLLNAAATT- 399
+ E V + A L W D +L W ++G + SS+ +W+PDV+L N+AA
Sbjct: 65 VDEKNQIVSVNAWLSYTWFDHKLQWEPKKYGGIQDIRFPGSSDHIWKPDVLLYNSAAEDF 124
Query: 400 AGDYALRARVSNNGSVSWI 456
+ + G+V WI
Sbjct: 125 DSTFKSNLLTYHTGTVVWI 143
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 45.2 bits (102), Expect = 6e-05
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +1
Query: 193 IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 366
++V + L L+ ++ E V + A L+ +W+D L W ++G T L +LW P
Sbjct: 51 VMVKMGLVLQQIVDVDEKNQVVDVNAWLKFSWVDYSLKWKPEDYGGVTDLRFRKGQLWTP 110
Query: 367 DVVLLNAAATTAGD-YALRARVSNNGSVSWI 456
DV++ N+A YA V NG V+W+
Sbjct: 111 DVLMYNSADPQFDSRYASNLLVYPNGLVNWM 141
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 44.8 bits (101), Expect = 8e-05
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Frame = +1
Query: 232 IRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTA-- 402
+ E + V I L++ WID+ L+W+ ++G S V + ++W+PDV++ N A
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNNANMNVEE 128
Query: 403 GDYALRARVSNNGSVSWIKRL--DISTPISMQ 492
+ A V N G V + + DIS +++Q
Sbjct: 129 NEMETNAIVDNTGRVMLFRSMITDISCNLNLQ 160
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 44.8 bits (101), Expect = 8e-05
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Frame = +1
Query: 232 IRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTA-- 402
+ E + V I L++ WID+ L+W+ ++G S V + ++W+PDV++ N A
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNNANMNVEE 128
Query: 403 GDYALRARVSNNGSVSWIKRL--DISTPISMQ 492
+ A V N G V + + DIS +++Q
Sbjct: 129 NEMETNAIVDNTGRVMLFRSMITDISCNLNLQ 160
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Frame = +1
Query: 196 VVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 363
V+N+T+ + N + E ++IL +W D L+W+ EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 364 PDVVLLNAAATT--AGDYALRARVSNNGSVSWIKRLDISTPISM 489
PD + N T ++ R R V + K +D++ P+S+
Sbjct: 120 PDGYIFNTVEETEPLENHNARVRYDGRVEVDFNKLVDLTCPMSV 163
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Frame = +1
Query: 196 VVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 363
V+N+T+ + N + E ++IL +W D L+W+ EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 364 PDVVLLNAAATT--AGDYALRARVSNNGSVSWIKRLDISTPISM 489
PD + N T ++ R R V + K +D++ P+S+
Sbjct: 120 PDGYIFNTVEETEPLENHNARVRYDGRVEVDFNKLVDLTCPMSV 163
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +1
Query: 178 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSER 354
PP +I + L++ ++ + E E L D + +W D RLSW+ ++G + V +
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHIYVPRSK 137
Query: 355 LWRPDVVLLNAAATTAGD--YALRARVSNNGSV 447
+W P+ +++ + D Y A + +NGS+
Sbjct: 138 VWIPETTIVDCSEIKVFDNEYTRYAWLHSNGSI 170
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +1
Query: 172 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSS 348
E P KI + L L + N+ E E + L M W D +L W+ ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 349 ERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 456
E++W PD+VL NA + + + G+V W+
Sbjct: 118 EKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWV 154
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +1
Query: 172 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSS 348
E P KI + L L + N+ E E + L M W D +L W+ ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 349 ERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 456
E++W PD+VL NA + + + G+V W+
Sbjct: 118 EKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWV 154
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +1
Query: 172 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSS 348
E P KI + L L + N+ E E + L M W D +L W+ ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 349 ERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 456
E++W PD+VL NA + + + G+V W+
Sbjct: 118 EKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWV 154
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 43.6 bits (98), Expect = 2e-04
Identities = 36/155 (23%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
Frame = +1
Query: 61 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP---DSKIVVNLTLHLRHAN 231
I++L FL+ A+A + +I L Y +E P +S N+T+ L
Sbjct: 10 IVVLHFLMGLAMAQQKQ---------LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQ 60
Query: 232 IR---ESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT 399
I+ E++ + + ++ W D+ L+WN ++G + V SE +W+PD+++ N A
Sbjct: 61 IQKVHENDQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMN 120
Query: 400 AGDYALR--ARVSNNGSVSWIKRL--DISTPISMQ 492
+ ++ ++ + G +S + + DI+ + M+
Sbjct: 121 IKENEMQTNVQIEHTGKISLFRAIITDITCDLQME 155
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 43.6 bits (98), Expect = 2e-04
Identities = 36/155 (23%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
Frame = +1
Query: 61 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP---DSKIVVNLTLHLRHAN 231
I++L FL+ A+A + +I L Y +E P +S N+T+ L
Sbjct: 10 IVVLHFLMGLAMAQQKQ---------LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQ 60
Query: 232 IR---ESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT 399
I+ E++ + + ++ W D+ L+WN ++G + V SE +W+PD+++ N A
Sbjct: 61 IQKVHENDQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMN 120
Query: 400 AGDYALR--ARVSNNGSVSWIKRL--DISTPISMQ 492
+ ++ ++ + G +S + + DI+ + M+
Sbjct: 121 IKENEMQTNVQIEHTGKISLFRAIITDITCDLQME 155
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 43.2 bits (97), Expect = 3e-04
Identities = 30/129 (23%), Positives = 64/129 (49%), Gaps = 11/129 (8%)
Frame = +1
Query: 139 MIDSLLATYDRESPP---DSKIVVNLTLHLRHANIR---ESESTVRILADLQMNWIDKRL 300
+I L Y +E P +S N+T+ L I+ E++ + + ++ W D+ L
Sbjct: 11 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 70
Query: 301 SWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWIKRL-- 465
+WN ++G + V SE +W+PD+++ N A + ++ ++ + G +S + +
Sbjct: 71 TWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIIT 130
Query: 466 DISTPISMQ 492
DI+ + M+
Sbjct: 131 DITCDLQME 139
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 43.2 bits (97), Expect = 3e-04
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Frame = +1
Query: 139 MIDSLLATYDRESPP--DSKIVVNLTLHL---RHANIRESESTVRILADLQMNWIDKRLS 303
++ L YD P D + VN+ L L + ++ E + ++ Q W D +L
Sbjct: 28 LLKDLREGYDPVERPVADHRKPVNVKLRLILQQLVDVDERNQVITLVVWNQYTWNDYKLR 87
Query: 304 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 447
W+ E+G T L + LW+PD++L N+A + + VS+NG V
Sbjct: 88 WSPEEYGNITTLQIPHGTLWKPDILLFNSANEHFDASFPVHMVVSSNGDV 137
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 42.7 bits (96), Expect = 3e-04
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Frame = +1
Query: 46 MSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRH 225
MS + ILL F + S E L DS + S P + V L+ +
Sbjct: 1 MSFVFFILLTFYIQVK-GSVDEYRLLQYLKENYDSFERPVENSSAP-LDVKVRFLLN-QI 57
Query: 226 ANIRESESTVRILADLQMNWIDKRLSWNAGEWG------CSTWLVSSERLWRPDVVLLNA 387
++ E + ILA + +W D +L+W+ +G S +S +LWRPDV+L N+
Sbjct: 58 MDVDEKNQVMSILAYMDYHWNDYKLTWDPKLFGGIRDVRFSGDDDASFKLWRPDVLLFNS 117
Query: 388 AATT-AGDYALRARVSNNGSV 447
+ + Y+ R VS+NG V
Sbjct: 118 VSESFDSTYSSRFIVSSNGDV 138
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 41.9 bits (94), Expect = 6e-04
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 199 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVV 375
VN+ L + H + E E T + + WID+ + W+A + + +S+ LW+P +
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKLTISAHSLWQPALA 113
Query: 376 LLNAA 390
L N+A
Sbjct: 114 LYNSA 118
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 41.9 bits (94), Expect = 6e-04
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Frame = +1
Query: 142 IDSLLATYDRESP----PDSKIVVNLTL---HLRHANIRESESTVRILADLQMNWIDKRL 300
+ + A +D P PD+ N TL +L+ + E E V ++ +L W D RL
Sbjct: 50 VSPVYAWFDTSKPLGYDPDAPQRYNYTLFLYNLKLIQVNEPEEQVSVVLELMEYWYDPRL 109
Query: 301 SWNAGEWGCSTWLVS-SERLWRP 366
SWNA ++ T + + E++W P
Sbjct: 110 SWNASDYKNVTAIFTRQEKIWSP 132
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 390
L+M W D RL W+ G WG L V +++W PD++L N A
Sbjct: 77 LEMQWFDYRLMWDPGRWGKIRKLHVPVDQIWIPDILLYNNA 117
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 178 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSER 354
PP +++ + + + L+ ++ E E V L D W D+RL WN E+ G S V
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHIYVPQRM 109
Query: 355 LWRPDVVLLNA 387
+W P+V + +A
Sbjct: 110 IWLPEVTIADA 120
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 41.5 bits (93), Expect = 8e-04
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +1
Query: 199 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVV 375
V + L++ H + E E T + L +W D+ L W ST ++S +LW+P +
Sbjct: 54 VAVYLNIAHVEKVDEHEQTALVHGHLMASWTDEYLKWERKATNISTLSIASSKLWQPALQ 113
Query: 376 LLNAAATTAGDY---ALRARVSNNGSV 447
L N+A + L A V N G V
Sbjct: 114 LYNSARGNSWSLYLTGLPAIVYNTGKV 140
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +1
Query: 217 LRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAA 393
+R ++ E + L+M W D +L+W ++G T + S+ +W PD+VL N AA
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAA 131
Query: 394 TTAGDYALR-ARVSNNGSVSW 453
L A V+ G+V W
Sbjct: 132 GDPDITILTDALVTFEGNVYW 152
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +1
Query: 217 LRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAA 393
+R ++ E + L+M W D +L+W ++G T + S+ +W PD+VL N AA
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAA 131
Query: 394 TTAGDYALR-ARVSNNGSVSW 453
L A V+ G+V W
Sbjct: 132 GDPDITILTDALVTFEGNVYW 152
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 6/113 (5%)
Frame = +1
Query: 76 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRE 240
F L + + E + T + D L+ YD P + +++N++++ +
Sbjct: 10 FYLAISWCNLLEVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVLTLDP 69
Query: 241 SESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LWRPDVVLLNAAAT 396
+E T+ ++ + W D+ L WN ++ TWL E LW PD + + T
Sbjct: 70 AEETINFSSEFILQWKDEFLFWNKSDYNI-TWLKLKESFLWTPDTTVSTSIDT 121
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 40.7 bits (91), Expect = 0.001
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 10/146 (6%)
Frame = +1
Query: 85 TCAIASAAECE-NATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVR 258
T ++ A CE N+ ++ LL YD+ P + V +++ L +I SE +
Sbjct: 20 TESLVDPAHCEYNSNHRKSILTDLLQDYDKTMVPSNNSV-QVSVELTVQDISSISEISSS 78
Query: 259 ILADLQMN--WIDKRLSWNAGEWGCSTWLVS--SERLWRPDVVLLNAAATTAGDYA---L 417
+AD+ + W D RL + + L S SERLW P+V +N+ +T +
Sbjct: 79 FIADVWFSQVWYDPRLEYRNISCKTNLSLDSYVSERLWTPNVCFVNSKSTQVHKSPASNI 138
Query: 418 RARVSNNGSVSWIK-RLDISTPISMQ 492
+ NG+V W+ R+ +S P S +
Sbjct: 139 LLIIYPNGTV-WLNYRVQVSAPCSFE 163
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Frame = +1
Query: 193 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL---VSSERLW 360
+VV++ ++L+ ++ E + ++A ++ W D +L W+ E+G + ++ +W
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYGGIKDIRIPGNANAIW 112
Query: 361 RPDVVLLNAA-ATTAGDYALRARVSNNGSV 447
+PDV+L N+A Y + VS G V
Sbjct: 113 KPDVLLYNSADENFDSTYPVNYVVSYTGDV 142
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +1
Query: 196 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDV 372
+V++ H+ H +I + E T+ + + M W D+ L W+ ++ + V ++W+P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 373 VLLNAAA--TTAGDYALRARV 429
+ N+A+ +A D++ A V
Sbjct: 134 KVSNSASGLGSAFDFSTSAHV 154
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +1
Query: 196 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDV 372
+V++ H+ H +I + E T+ + + M W D+ L W+ ++ + V ++W+P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 373 VLLNAAA--TTAGDYALRARV 429
+ N+A+ +A D++ A V
Sbjct: 134 KVSNSASGLGSAFDFSTSAHV 154
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Frame = +1
Query: 46 MSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRE-SPPDSKIVVNLTLH-L 219
M + ++LL + + + A E + + +L+ TYD + P D +V +T +
Sbjct: 1 MLISCLLLLMLWILRFLTAVAFLETSNTETLLQQLFNQTYDVDMKPSDDLTMVTITPNTF 60
Query: 220 RHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCST-WL-VSSERLWRPDVVLLN 384
++ +++ T++ + + W D L WN W+ +S+ R W PDV+ N
Sbjct: 61 ILLSMDQTQETIQYSEEFLLRWYDPILHWNQSAVSYENDWIKISASRAWIPDVIFTN 117
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +1
Query: 193 IVVNLTLHL-RHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 366
++V + L L N+ E + + L + W D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 367 DVVLL-NAAATTAGDYALRARVSNNGSVSWI 456
D+VL NA + +++ G + W+
Sbjct: 116 DIVLFNNADGNYEVSFMCNVVINHKGDMLWV 146
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 205 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 366
L +L+ ++E E V ++ +L W D RLSWN+ + T V E++W P
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNSSLYSNIPTVFVRQEKVWSP 133
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +1
Query: 193 IVVNLTLHL-RHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 366
++V + L L N+ E + + L + W D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 367 DVVLL-NAAATTAGDYALRARVSNNGSVSWI 456
D+VL NA + +++ G + W+
Sbjct: 116 DIVLFNNADGNYEVSFMCNVVINHKGDMLWV 146
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +1
Query: 193 IVVNLTLHL-RHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 366
++V + L L N+ E + + L + W D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 367 DVVLL-NAAATTAGDYALRARVSNNGSVSWI 456
D+VL NA + +++ G + W+
Sbjct: 116 DIVLFNNADGNYEVSFMCNVVINHKGDMLWV 146
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Frame = +1
Query: 151 LLATYDRESPPD--SKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLSWNAG 315
LL Y+ E P SK +N+T I + + +IL ++++W+D +L W+
Sbjct: 7 LLYDYNNEVRPSVHSKEPINVTFVFSLTQIIDVDERNQILTTNSWIRLHWVDYKLVWDPR 66
Query: 316 EWGCSTWL-VSSERLWRPDVVLLNAA 390
+ T + + S+++W+PD++L N A
Sbjct: 67 LYQNVTRIHIPSDKIWKPDIILYNNA 92
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 444
L+M+W D L+W+ E+G + +W+PDV+L N+ + + A V G+
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNSVDQQFDSTWPVNAVVLYTGN 136
Query: 445 VSWI 456
V+WI
Sbjct: 137 VTWI 140
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +1
Query: 253 VRILADLQMNWIDKRLSWNAGEWGCST---WLVSSERLWRPDVVLLNAAATT-AGDYALR 420
+ + A L+ W+D RL W+ ++ T + ++WRPD++L N+A+ +
Sbjct: 12 IEVNAWLKYVWMDYRLQWDPLQYDNITSIRFAGGENQIWRPDILLYNSASEDFDSSFKSN 71
Query: 421 ARVSNNGSVSWI 456
V N G V+WI
Sbjct: 72 EVVYNTGEVNWI 83
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 444
L+M+W D L+W+ E+G + +W+PDV+L N+ + + A V G+
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNSVDQQFDSTWPVNAVVLYTGN 136
Query: 445 VSWI 456
V+WI
Sbjct: 137 VTWI 140
>AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ion
channel protein 12 protein.
Length = 425
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Frame = +1
Query: 232 IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA--ATTA 402
+ E +++L +W D L W+ EW G + +W PD + N T
Sbjct: 68 VNEQNEQIKLLIWFPQSWKDDYLVWDPDEWDGIEKITIPKSMVWLPDGYIFNTVEETDTL 127
Query: 403 GDYALRARVSNNGSVSWIKRLDISTPISM 489
++ +R + V + K +D+ P+S+
Sbjct: 128 DNHNVRVHYNGKVEVDFNKLIDLICPMSV 156
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 38.7 bits (86), Expect = 0.006
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Frame = +1
Query: 103 AAECENATSL----SLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA-NIRESESTVRI 261
A CEN +L S +++ + YDR P ++VN+T+ L ++E++
Sbjct: 57 ALNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVLGILIELKENQQLAAY 116
Query: 262 LADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 387
+ W D RLSW+ ++ G +V +W P + + N+
Sbjct: 117 VISHTQRWYDGRLSWDPSKYRGQREVIVPQTMVWIPKLFVYNS 159
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 38.3 bits (85), Expect = 0.007
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = +1
Query: 145 DSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW- 321
+SL+ S P ++ +L L N+ E ++ M W D ++ W+ E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 322 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 456
G T V +++W PD+VL NA + V + G + W+
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNADGNYLVSFYSNVVVEHTGDMLWV 142
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 38.3 bits (85), Expect = 0.007
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = +1
Query: 145 DSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW- 321
+SL+ S P ++ +L L N+ E ++ M W D ++ W+ E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 322 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 456
G T V +++W PD+VL NA + V + G + W+
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNADGNYLVSFYSNVVVEHTGDMLWV 142
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEWGCSTW-LVSSERLWRPDV 372
L+++W D+RL WN EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEWGCSTW-LVSSERLWRPDV 372
L+++W D+RL WN EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 37.1 bits (82), Expect = 0.017
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 205 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 366
L +L+ ++E V ++ +L W D RLSWN + ST E++W P
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWNISLYSNVSTIFARQEKVWSP 133
>AF498370-1|AAN65376.1| 550|Caenorhabditis elegans GABA-A receptor
subunit protein.
Length = 550
Score = 37.1 bits (82), Expect = 0.017
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 13/162 (8%)
Frame = +1
Query: 124 TSLSLMIDSLLATYD-RESPPDSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWID 291
++ S ++ LL YD R P + LT+ + A+ I E + + L W D
Sbjct: 52 SNASSLLSDLLLDYDIRLRPGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTD 111
Query: 292 KRLSWNAGEWGCSTWLVS---SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSW 453
+RL W + E +S S+ +W PD L N + + R R++ +G V++
Sbjct: 112 ERLRW-SNEIPIDEMTLSGEFSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAY 170
Query: 454 IKRLDISTPISMQXRXXAQRHADLHVQVRVLGCT---ILTKW 570
RL + SM R + + V++ G T +L KW
Sbjct: 171 GMRLTSTLSCSMNLRNFSLDSQNCTVEIESYGYTTSEVLMKW 212
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 36.7 bits (81), Expect = 0.022
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Frame = +1
Query: 109 ECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLH-LRHANIRESESTVRILADL 273
E + T + D L+ YD P + +N++++ + + +E T+ +
Sbjct: 21 EIDGITVSEQLKDVLMEGYDSSIRPVINERDTLFINISINSMSFLTLDPAEETINFSGEF 80
Query: 274 QMNWIDKRLSWNAGEWGCSTWLVSSER-LWRPDVVLLNAAAT 396
+ W D+ L WN ++ TWL E LW PD + + T
Sbjct: 81 ILQWKDEFLFWNKSDYNI-TWLKLKESFLWTPDTTVSTSIDT 121
>Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical
protein ZC482.1 protein.
Length = 550
Score = 36.3 bits (80), Expect = 0.030
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 13/162 (8%)
Frame = +1
Query: 124 TSLSLMIDSLLATYD-RESPPDSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWID 291
++ S ++ LL YD R P + LT+ + A+ I E + + L W D
Sbjct: 52 SNASSLLSDLLLDYDIRLRPGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTD 111
Query: 292 KRLSWNAGEWGCSTWLVS---SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSW 453
+RL W + E +S S+ +W PD L N + + R R++ +G V++
Sbjct: 112 ERLRW-SNEIPIDEMTLSGEFSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAY 170
Query: 454 IKRLDISTPISMQXRXXAQRHADLHVQVRVLGCT---ILTKW 570
RL + SM R + V++ G T +L KW
Sbjct: 171 GMRLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLMKW 212
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 36.3 bits (80), Expect = 0.030
Identities = 23/79 (29%), Positives = 23/79 (29%)
Frame = +2
Query: 647 GCPPXTXXXXKPGWAXSXXXFRXTXPGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPX 826
G P PG T P P GP P GPP P P P
Sbjct: 110 GKPGAPGLNGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPE 169
Query: 827 GPGXXPXFXXXXXXPGXGG 883
GP P PG GG
Sbjct: 170 GPNGEPGNKGPAGPPGPGG 188
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 35.9 bits (79), Expect = 0.039
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Frame = +1
Query: 109 ECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVRILADLQMN- 282
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 283 -WIDKRLSWNAGEWGCSTWL---VSS--ERLWRPDVVLLNAAATTAGDYALR---ARVSN 435
W D RLS+ C+T + VS +++W PD ++N+ +++ +
Sbjct: 68 IWQDPRLSFKHLN-VCATNITLKVSDFRKKIWTPDTCIINSKSSSIHSSPSENTFVILYE 126
Query: 436 NGSVSWIKRLDISTPISMQXR 498
NG V RL++ TP S+ +
Sbjct: 127 NGLVWSNFRLNVKTPCSVNLK 147
>Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical
protein K03B8.9 protein.
Length = 564
Score = 35.5 bits (78), Expect = 0.052
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 190 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 366
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 367 DVVLLNA 387
D L N+
Sbjct: 138 DTYLYNS 144
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 35.5 bits (78), Expect = 0.052
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = +2
Query: 680 PGWAXSXXXFRXTXPGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPXGPGXXPXFXXX 859
PG PG P AGP P GPP + +P P P GP P
Sbjct: 201 PGQPGQDAPSEPITPGA-PGPAGPAGPQGPPGAPGQPGHDGQPGAPGPKGPNGNPGAPGA 259
Query: 860 XXXPGXGG 883
PG G
Sbjct: 260 DGNPGAPG 267
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 35.5 bits (78), Expect = 0.052
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = +2
Query: 680 PGWAXSXXXFRXTXPGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPXGPGXXPXFXXX 859
PG PG P AGP P GPP + +P P P GP P
Sbjct: 201 PGQPGQDAPSEPITPGA-PGPAGPAGPQGPPGAPGQPGHDGQPGAPGPKGPNGNPGAPGA 259
Query: 860 XXXPGXGG 883
PG G
Sbjct: 260 DGNPGAPG 267
>U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit precursor protein.
Length = 564
Score = 35.5 bits (78), Expect = 0.052
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 190 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 366
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 367 DVVLLNA 387
D L N+
Sbjct: 138 DTYLYNS 144
>U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 564
Score = 35.5 bits (78), Expect = 0.052
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 190 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 366
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 367 DVVLLNA 387
D L N+
Sbjct: 138 DTYLYNS 144
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 35.5 bits (78), Expect = 0.052
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = +2
Query: 680 PGWAXSXXXFRXTXPGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPXGPGXXPXFXXX 859
PG PG P AGP P GPP + +P P P GP P
Sbjct: 201 PGQPGQDAPSEPITPGA-PGPAGPAGPQGPPGAPGQPGHDGQPGAPGPKGPNGNPGAPGA 259
Query: 860 XXXPGXGG 883
PG G
Sbjct: 260 DGNPGAPG 267
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 35.5 bits (78), Expect = 0.052
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = +2
Query: 680 PGWAXSXXXFRXTXPGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPXGPGXXPXFXXX 859
PG PG P AGP P GPP + +P P P GP P
Sbjct: 201 PGQPGQDAPSEPITPGA-PGPAGPAGPQGPPGAPGQPGHDGQPGAPGPKGPNGNPGAPGA 259
Query: 860 XXXPGXGG 883
PG G
Sbjct: 260 DGNPGAPG 267
>AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ion
channel protein 5 protein.
Length = 340
Score = 35.1 bits (77), Expect = 0.068
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Frame = +1
Query: 67 LLPFLLTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSKIVVNLTLH-LRHANIRE 240
LL FL+ S + + L+ + TYD P D+ V +T + ++ +
Sbjct: 8 LLTFLVLRTFGSNTTNVESNTEVLLQELFNRTYDVNVKPSDTLTTVTITPNTFLLLSMDQ 67
Query: 241 SESTVRILADLQMNWIDKRLSWNAGEWGCS-TWL-VSSERLWRPDVV 375
++ T+ + + W D L WN + + W+ +S R+W PDV+
Sbjct: 68 TQETILFSQEFLLKWYDPILHWNRTLFDYNREWIKISVSRVWVPDVI 114
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 35.1 bits (77), Expect = 0.068
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 211 LHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 363
LH+ H + I++ + +++ W+D+RL WN + G T+ + +WR
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNYSGIRTFSTTRHEMWR 114
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 35.1 bits (77), Expect = 0.068
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = +2
Query: 722 PGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPXGPGXXPXFXXXXXXPGXGG 883
PG P AGP P GPP + +P P P GP P PG G
Sbjct: 220 PGA-PGPAGPPGPQGPPGAPGQPGHDGQPGTPGPKGPNGNPGAPGADGNPGTPG 272
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 34.7 bits (76), Expect = 0.090
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = +1
Query: 115 ENATSLS-LMIDSLLATYDRESPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWI 288
E+A L+ L I +A+ + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 289 DKRLSWNAGEWGCSTWLVSS-ERLWRP 366
D RL WN W + +V S +W P
Sbjct: 93 DDRLMWNQDTWKKNKLVVHSFHHIWVP 119
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 163 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWL 339
YD ++P + L L+ + E V ++ ++ W D RLSWNA + T+
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNASLYDDIDTFY 122
Query: 340 VSSERLWRPDVVLLNA 387
+W P + A
Sbjct: 123 TRQSNVWSPTLSAFGA 138
>AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical
protein C04C3.2 protein.
Length = 464
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Frame = +1
Query: 139 MIDSLLATYDRESPPDSK----IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLS 303
+I+++ YD+ P ++ ++V++T+ L +RE++ + W D +L+
Sbjct: 44 LIETIQRRYDKRVRPFAESNRPVIVHMTIVLGILTEVRENQQVASFVISHVQKWRDPKLA 103
Query: 304 WNAGEWGCSTWLVSSERL-WRPDVVLLNAAAT 396
WN + T +V L W P + + N+ T
Sbjct: 104 WNPADHSGLTQVVMPRSLVWVPKLFIYNSMDT 135
>U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine
receptor protein 5 protein.
Length = 548
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 199 VNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDV 372
VNL++ L ++ E ++ + + +W D+ L WN ++G + +V ++W PD
Sbjct: 133 VNLSMSLYQILDVDEHMQSIEVNVWMVQHWYDEFLDWNPVDYGMINRTIVPYHQIWIPDT 192
Query: 373 VLLNA 387
L N+
Sbjct: 193 YLYNS 197
>AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform b protein.
Length = 513
Score = 33.9 bits (74), Expect = 0.16
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Frame = +1
Query: 76 FLLTCAIASAAECENATSLSLMIDSLL----ATYDRESPP-----DSKIVVNLTLHLRH- 225
FLL + E + + + +D+LL YD +SPP + VV L +++
Sbjct: 8 FLLLYRNSPKVEASRSEPVPIYLDNLLNAGRQVYDNQSPPVQHDKEEVTVVELAMYIEGM 67
Query: 226 ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNA 387
++ R ++ Q W D RL+ N ++W+PDV NA
Sbjct: 68 SSFRTQTMDFQLDVYFQQFWRDPRLAHNETRRVLVKDKAVLHKMWKPDVYFANA 121
>AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform a protein.
Length = 546
Score = 33.9 bits (74), Expect = 0.16
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Frame = +1
Query: 76 FLLTCAIASAAECENATSLSLMIDSLL----ATYDRESPP-----DSKIVVNLTLHLRH- 225
FLL + E + + + +D+LL YD +SPP + VV L +++
Sbjct: 8 FLLLYRNSPKVEASRSEPVPIYLDNLLNAGRQVYDNQSPPVQHDKEEVTVVELAMYIEGM 67
Query: 226 ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNA 387
++ R ++ Q W D RL+ N ++W+PDV NA
Sbjct: 68 SSFRTQTMDFQLDVYFQQFWRDPRLAHNETRRVLVKDKAVLHKMWKPDVYFANA 121
>Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical
protein T09A5.3 protein.
Length = 538
Score = 33.5 bits (73), Expect = 0.21
Identities = 21/100 (21%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Frame = +1
Query: 181 PDSKIVVNLTLHLRHANIRESE-STVRILADLQMNWIDKRLSWNAGEWG--CSTWLVSSE 351
P + V + + ++ + +++ + + A L+ W D RL WN ++ S +
Sbjct: 52 PKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGED 111
Query: 352 RLWRPDVVLLNAAATTAGD-----YALRARVSNNGSVSWI 456
++W+PD++L N + Y A ++G ++WI
Sbjct: 112 QIWQPDILLYNRYIEDEQESFDITYKTNAVAYSDGVINWI 151
>AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-7 protein.
Length = 538
Score = 33.5 bits (73), Expect = 0.21
Identities = 21/100 (21%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Frame = +1
Query: 181 PDSKIVVNLTLHLRHANIRESE-STVRILADLQMNWIDKRLSWNAGEWG--CSTWLVSSE 351
P + V + + ++ + +++ + + A L+ W D RL WN ++ S +
Sbjct: 52 PKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGED 111
Query: 352 RLWRPDVVLLNAAATTAGD-----YALRARVSNNGSVSWI 456
++W+PD++L N + Y A ++G ++WI
Sbjct: 112 QIWQPDILLYNRYIEDEQESFDITYKTNAVAYSDGVINWI 151
>Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical
protein F11A5.10 protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.28
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 12/149 (8%)
Frame = +1
Query: 82 LTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRH-ANIRESE 246
LT I E + ++ + YD R PP +VV++ + LR + I
Sbjct: 48 LTSPIHIPIEQPQTSDSKILAHLFTSGYDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVN 107
Query: 247 STVRILADLQMNWIDKRLSWNAGEWGCSTWLVSS--ERLWRPDVVLLN---AAATTAGDY 411
L+ +WIDKRLS+ G +++ + ++W PD N A T
Sbjct: 108 MEYSAQLTLRESWIDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKP 167
Query: 412 ALRARVSNNGSVSWIKRLD--ISTPISMQ 492
+ R+ N+G+V + R+ +S P+ +Q
Sbjct: 168 NVLIRIHNDGTVLYSVRISLVLSCPMYLQ 196
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 33.1 bits (72), Expect = 0.28
Identities = 22/79 (27%), Positives = 22/79 (27%)
Frame = +2
Query: 647 GCPPXTXXXXKPGWAXSXXXFRXTXPGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPX 826
G P PG T P P GP P GPP P P P
Sbjct: 108 GKPGAPGLNGNPGRPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQGNKGPLGPPGPPGPE 167
Query: 827 GPGXXPXFXXXXXXPGXGG 883
GP PG GG
Sbjct: 168 GPNGTAGNKGPAGPPGPGG 186
>U14524-1|AAA50785.1| 461|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl alpha protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.28
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 12/149 (8%)
Frame = +1
Query: 82 LTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRH-ANIRESE 246
LT I E + ++ + YD R PP +VV++ + LR + I
Sbjct: 48 LTSPIHIPIEQPQTSDSKILAHLFTSGYDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVN 107
Query: 247 STVRILADLQMNWIDKRLSWNAGEWGCSTWLVSS--ERLWRPDVVLLN---AAATTAGDY 411
L+ +WIDKRLS+ G +++ + ++W PD N A T
Sbjct: 108 MEYSAQLTLRESWIDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKP 167
Query: 412 ALRARVSNNGSVSWIKRLD--ISTPISMQ 492
+ R+ N+G+V + R+ +S P+ +Q
Sbjct: 168 NVLIRIHNDGTVLYSVRISLVLSCPMYLQ 196
>AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine
receptor (62.5 kD)(acr-23) protein.
Length = 545
Score = 33.1 bits (72), Expect = 0.28
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 187 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVS-SERLW 360
S I V L+L L + E + + + A W+D+ L W+ E+ T +++ + +W
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 361 RPDVVLLNA 387
PD L N+
Sbjct: 110 LPDTTLYNS 118
>AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholine
receptor protein 23 protein.
Length = 545
Score = 33.1 bits (72), Expect = 0.28
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 187 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVS-SERLW 360
S I V L+L L + E + + + A W+D+ L W+ E+ T +++ + +W
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 361 RPDVVLLNA 387
PD L N+
Sbjct: 110 LPDTTLYNS 118
>Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical
protein T01H10.7 protein.
Length = 399
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/73 (23%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 163 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL- 339
Y+ +P V+L +L+ + E E V ++ ++ W D R++W++ +G L
Sbjct: 64 YNPLAPKRFNYTVSL-YYLKLVEVIEPEEKVSVVLEMAEYWYDPRIAWDSSLYGDIKMLH 122
Query: 340 VSSERLWRPDVVL 378
+ +++W P + L
Sbjct: 123 MRQDKVWSPTLSL 135
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 32.3 bits (70), Expect = 0.48
Identities = 20/68 (29%), Positives = 22/68 (32%)
Frame = +2
Query: 680 PGWAXSXXXFRXTXPGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPXGPGXXPXFXXX 859
PG PG P AGP P G P + +P P P GP P
Sbjct: 201 PGQPGQDAPSEPITPGA-PGPAGPAGPQGQPGAPGQPGHDGQPGAPGPKGPNGNPGAPGA 259
Query: 860 XXXPGXGG 883
PG G
Sbjct: 260 DGNPGAPG 267
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 722 PGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPXGP 832
PG P AGP P GPP P P P GP
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGP 187
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -3
Query: 879 PXPGXXXXXQNXGXXPGPXGGGXXGRXXRXPRXXRXGGPXGXXGPAXXGXCPG 721
P PG PGP G P GP G GPA PG
Sbjct: 149 PCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPG 201
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/77 (27%), Positives = 23/77 (29%), Gaps = 1/77 (1%)
Frame = -3
Query: 873 PGXXXXXQNXGXXPGPXGGGXXGRXXRX-PRXXRXGGPXGXXGPAXXGXCPGXVXRXXXX 697
PG N G P G G G + P GP G GPA PG
Sbjct: 188 PGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAG 247
Query: 696 DXAHPGFXXXXVXGGHP 646
PG G+P
Sbjct: 248 PKGPPGAAGAPGADGNP 264
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 722 PGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPXGP 832
PG P AGP P GPP P P P GP
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGP 187
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -3
Query: 879 PXPGXXXXXQNXGXXPGPXGGGXXGRXXRXPRXXRXGGPXGXXGPAXXGXCPG 721
P PG PGP G P GP G GPA PG
Sbjct: 149 PCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPG 201
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/77 (27%), Positives = 23/77 (29%), Gaps = 1/77 (1%)
Frame = -3
Query: 873 PGXXXXXQNXGXXPGPXGGGXXGRXXRX-PRXXRXGGPXGXXGPAXXGXCPGXVXRXXXX 697
PG N G P G G G + P GP G GPA PG
Sbjct: 188 PGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAG 247
Query: 696 DXAHPGFXXXXVXGGHP 646
PG G+P
Sbjct: 248 PKGPPGAAGAPGADGNP 264
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 722 PGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPXGP 832
PG P AGP P GPP P P P GP
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGP 187
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -3
Query: 879 PXPGXXXXXQNXGXXPGPXGGGXXGRXXRXPRXXRXGGPXGXXGPAXXGXCPG 721
P PG PGP G P GP G GPA PG
Sbjct: 149 PCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPG 201
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/77 (27%), Positives = 23/77 (29%), Gaps = 1/77 (1%)
Frame = -3
Query: 873 PGXXXXXQNXGXXPGPXGGGXXGRXXRX-PRXXRXGGPXGXXGPAXXGXCPGXVXRXXXX 697
PG N G P G G G + P GP G GPA PG
Sbjct: 188 PGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAG 247
Query: 696 DXAHPGFXXXXVXGGHP 646
PG G+P
Sbjct: 248 PKGPPGAAGAPGADGNP 264
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 722 PGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPXGP 832
PG P AGP P GPP P P P GP
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGP 187
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -3
Query: 879 PXPGXXXXXQNXGXXPGPXGGGXXGRXXRXPRXXRXGGPXGXXGPAXXGXCPG 721
P PG PGP G P GP G GPA PG
Sbjct: 149 PCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPG 201
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/77 (27%), Positives = 23/77 (29%), Gaps = 1/77 (1%)
Frame = -3
Query: 873 PGXXXXXQNXGXXPGPXGGGXXGRXXRX-PRXXRXGGPXGXXGPAXXGXCPGXVXRXXXX 697
PG N G P G G G + P GP G GPA PG
Sbjct: 188 PGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAG 247
Query: 696 DXAHPGFXXXXVXGGHP 646
PG G+P
Sbjct: 248 PKGPPGAAGAPGADGNP 264
>Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical
protein B0491.4 protein.
Length = 454
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +1
Query: 232 IRESESTVRILADLQMNWIDKRLSWN-AGEWGC--STWLVSSERLWRPDVV 375
++ S + D+ +NW D+R+ W+ GE+ ++ +S +W P V+
Sbjct: 83 VKGSSYQFNVFGDIYLNWKDERMKWDKKGEFENYEHLYIFNSSAIWTPHVI 133
>AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical
protein F09G2.5 protein.
Length = 563
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNA 387
L M W D+RL+ N T + ++R+W PD+ +N+
Sbjct: 175 LAMGWFDRRLAHNCTHPILVTSKLIADRIWYPDLYFVNS 213
>Z81085-2|CAB03114.2| 618|Caenorhabditis elegans Hypothetical
protein F46F3.2 protein.
Length = 618
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = +1
Query: 163 YDRESPP----DSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAGEWGC 327
YD PP D + V + + ++ +N S + A ++M+WID RL +
Sbjct: 259 YDARQPPSLHVDDTVTVKVGIAVQSMSNFELSTMDYDLDAWVRMSWIDPRLRHDLSRPIL 318
Query: 328 STWLVSSERLWRPDVVLLNAAATT 399
+ +WRPD + N+ +T
Sbjct: 319 VNDYTFLKMIWRPDPIFTNSKYST 342
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/79 (26%), Positives = 23/79 (29%)
Frame = +2
Query: 647 GCPPXTXXXXKPGWAXSXXXFRXTXPGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPX 826
G P +PG PG P AGP P G P +P P
Sbjct: 193 GAPGAPGTPGEPGVPAQSEPLIPGEPGP-PGEAGPQGPPGSPGQPGADGSPGQPGPKGPN 251
Query: 827 GPGXXPXFXXXXXXPGXGG 883
GP P PG G
Sbjct: 252 GPDGQPGADGNPGAPGPAG 270
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/79 (26%), Positives = 23/79 (29%)
Frame = +2
Query: 647 GCPPXTXXXXKPGWAXSXXXFRXTXPGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPX 826
G P +PG PG P AGP P G P +P P
Sbjct: 193 GAPGAPGTPGEPGVPAQSEPLIPGEPGP-PGEAGPQGPPGSPGQPGADGSPGQPGPKGPN 251
Query: 827 GPGXXPXFXXXXXXPGXGG 883
GP P PG G
Sbjct: 252 GPDGQPGADGNPGAPGPAG 270
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.3 bits (65), Expect = 1.9
Identities = 26/89 (29%), Positives = 29/89 (32%), Gaps = 4/89 (4%)
Frame = -2
Query: 889 GPPAXXGXXXXXXKXR--GXPGTXGWGXXGXGGKAXXXXQXR--GPPGRXRXRXXGRXPG 722
GPP G + G PG G G G+A GPPG PG
Sbjct: 140 GPPGEAGTDGEPGQAGQDGQPGQAGQADSGSSGQACITCPAGPPGPPGPDGNAGPAGAPG 199
Query: 721 AXXPEXXXGXCPPGLPXXXRPGWAPXXGQ 635
P+ G PP P PG GQ
Sbjct: 200 VPGPDGDAGSPPPPGPPGP-PGPPGNDGQ 227
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +2
Query: 722 PGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPXGPGXXPXFXXXXXXPGXGG 883
PG P AGP P GPP G +P P P GP PG G
Sbjct: 248 PGG-PGPAGPPGPPGPPGQDGSGG-AAQPGPPGPPGPPGNDGQPGGPGQPGGPG 299
>Z83120-8|CAE46678.2| 511|Caenorhabditis elegans Hypothetical
protein R06A4.10b protein.
Length = 511
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 187 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LW 360
S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++ +W
Sbjct: 5 SPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIW 64
Query: 361 RPDVVLLNA 387
PD L N+
Sbjct: 65 LPDTTLYNS 73
>Z83120-7|CAB51466.2| 514|Caenorhabditis elegans Hypothetical
protein R06A4.10a protein.
Length = 514
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 187 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LW 360
S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++ +W
Sbjct: 5 SPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIW 64
Query: 361 RPDVVLLNA 387
PD L N+
Sbjct: 65 LPDTTLYNS 73
>AY523515-1|AAR98637.1| 553|Caenorhabditis elegans acetylcholine
receptor 20 (63.9kD) alternative variant a protein.
Length = 553
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 187 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LW 360
S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++ +W
Sbjct: 47 SPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIW 106
Query: 361 RPDVVLLNA 387
PD L N+
Sbjct: 107 LPDTTLYNS 115
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = +2
Query: 722 PGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPXGPGXXPXFXXXXXXPGXGG 883
PG P AGP P G P + +P P P GP P PG G
Sbjct: 216 PGA-PGEAGPQGPPGQPGTPGQN---GQPGQPGPKGPSGQPGQPGSDGNPGPAG 265
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/68 (27%), Positives = 21/68 (30%)
Frame = +2
Query: 680 PGWAXSXXXFRXTXPGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPXGPGXXPXFXXX 859
PG PG P G P GPP + +P P P GP P
Sbjct: 201 PGQPGQDAPSEPITPGA-PGPQGAPGPQGPPGQPGQPGHDGQPGAPGPKGPNGNPGQPGA 259
Query: 860 XXXPGXGG 883
PG G
Sbjct: 260 DGNPGAPG 267
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/68 (27%), Positives = 21/68 (30%)
Frame = +2
Query: 680 PGWAXSXXXFRXTXPGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPXGPGXXPXFXXX 859
PG PG P G P GPP + +P P P GP P
Sbjct: 168 PGQPGQDAPSEPITPGA-PGPQGTPGPQGPPGQPGQPGHDGQPGAPGPKGPNGNPGQPGA 226
Query: 860 XXXPGXGG 883
PG G
Sbjct: 227 DGNPGAPG 234
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/68 (27%), Positives = 21/68 (30%)
Frame = +2
Query: 680 PGWAXSXXXFRXTXPGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPXGPGXXPXFXXX 859
PG PG P G P GPP + +P P P GP P
Sbjct: 201 PGQPGQDAPSEPITPGA-PGPQGTPGPQGPPGQPGQPGHDGQPGAPGPKGPNGNPGQPGA 259
Query: 860 XXXPGXGG 883
PG G
Sbjct: 260 DGNPGAPG 267
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +2
Query: 722 PGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPXGPGXXPXFXXXXXXPGXGG 883
P P GP P G P +G P P P G P PG G
Sbjct: 143 PAGAPGQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPG 196
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +2
Query: 722 PGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPXGPGXXPXFXXXXXXPGXGG 883
P P GP P G P +G P P P G P PG G
Sbjct: 143 PAGVPGQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPG 196
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 205 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 366
L L+ + E + V ++ ++ W D RL+WN ++ ++ +W P
Sbjct: 78 LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWNKEDYDDIASIYTRQANVWSP 132
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +2
Query: 722 PGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPXGPGXXPXFXXXXXXPGXGG 883
P P G P G P G P P P GP P PG G
Sbjct: 199 PQGAPGVPGEKGPTGEPGKVINGAPPGPPGPPGPPGPQGPPGPPGKDGQPGKAG 252
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/69 (33%), Positives = 23/69 (33%)
Frame = -2
Query: 889 GPPAXXGXXXXXXKXRGXPGTXGWGXXGXGGKAXXXXQXRGPPGRXRXRXXGRXPGAXXP 710
GPP G K G PG G G G A Q RGPPG PG
Sbjct: 214 GPPGRPGAPGQPGKA-GSPGQDG--SNGDAGVAGEPGQ-RGPPGPPGQAGTPGSPGDAGS 269
Query: 709 EXXXGXCPP 683
CPP
Sbjct: 270 PGSCEHCPP 278
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = -3
Query: 882 PPXPGXXXXXQNXGXXPGPXGGGXXGRXXRXPRXXRXGGPXGXXGPAXXGXCPGXVXRXX 703
P PG N G GP G G P GP G GP PG
Sbjct: 204 PGPPGPPGGPGNDGQPGGPGNPGAPGAVTEVPGQQGPPGPPGPAGP------PGPAGNAG 257
Query: 702 XXDXAHPG 679
A PG
Sbjct: 258 QAGYAQPG 265
>Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical
protein C15A7.1 protein.
Length = 403
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Frame = +1
Query: 145 DSLLATYDRESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAGEW 321
+ +L D P + + + L L H + + E + + ++ W D+RL W+ +
Sbjct: 39 EDVLGPLDGSMPSELPVFIGAQLKLDHISRVDEKTGFLTLALTVKFMWSDERLQWDPSHY 98
Query: 322 GCST---------WLVSSERLWRPDVVLLN 384
T WL ++W+P + + N
Sbjct: 99 SGFTRTRLEFVDFWLY---QIWKPRIYMTN 125
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +2
Query: 722 PGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPXGPGXXPXFXXXXXXPGXGG 883
P P GP P G P G P P P G P PG G
Sbjct: 141 PAGAPGNPGPQGPNGNPGAPAHGGGQGPPGPPGPAGDAGSPGQAGAPGNPGRPG 194
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +3
Query: 675 GSPGGQXPXCXSGXXAPGXRPXXRXRXRPGGPRXWXXXXAXPPXPXXPHPXVP 833
G PG G G RP R P GPR P P P P P
Sbjct: 172 GPPGPPGGPGGPGEGGDGGRPGNPGRPGPAGPRGEPGTEYKPGQPGRPGPPGP 224
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/73 (30%), Positives = 25/73 (34%), Gaps = 1/73 (1%)
Frame = +3
Query: 675 GSPGGQXPXCXSGXXAPGXRPXXRXRXRPGGP-RXWXXXXAXPPXPXXPHPXVPGXPRCF 851
G+PGG P +G P P PG P R + P P P P P P
Sbjct: 177 GAPGGDAPPGEAGPKGPPGPPG--SPGAPGEPGRPGDDAPSEPLIPGEPGPQGPPGPPGQ 234
Query: 852 XXXXFXPXXAGGP 890
P GGP
Sbjct: 235 AGPDGQPGAPGGP 247
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +2
Query: 722 PGXXPXXAGPXSPXGPPXLXXRGCLXXRPXXPPPXGPGXXPXFXXXXXXPGXGG 883
PG P AGP P G P +P P GP P PG G
Sbjct: 217 PGP-PGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGPDGQPGADGNPGAPGPAG 269
>Z81125-6|CAI79225.1| 234|Caenorhabditis elegans Hypothetical
protein T22A3.3b protein.
Length = 234
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 388 PRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFEDLPVS-ARWTRTHEC 230
P++A+P + S + + + +P NS V ++S +P+S W R H C
Sbjct: 116 PKVAMPSELSYANVKRSSGYVDYMPTTYNSNVTSNSSAASVPMSPGTWVRCHYC 169
>Z81125-5|CAB03381.2| 398|Caenorhabditis elegans Hypothetical
protein T22A3.3a protein.
Length = 398
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 388 PRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFEDLPVS-ARWTRTHEC 230
P++A+P + S + + + +P NS V ++S +P+S W R H C
Sbjct: 280 PKVAMPSELSYANVKRSSGYVDYMPTTYNSNVTSNSSAASVPMSPGTWVRCHYC 333
>Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical
protein AC3.6 protein.
Length = 325
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -2
Query: 844 RGXPGTXGWGXXGXGGKAXXXXQXRGPPGRXRXRXXGRXPGAXXPEXXXGXCPPG 680
RG PG G G A G PGR R G A P PPG
Sbjct: 182 RGLPGYPGMPGDNGSGGANGHDGATGQPGRSGTRSYGSPGPAGSPGRVGRGGPPG 236
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +3
Query: 648 GAHPGRXXXGSPGGQXPXCXSGXXAPGXRPXXRXRXRPGGPRXWXXXXAXPPXPXXPHPX 827
G G G PG G RP R P GPR P P P P
Sbjct: 162 GPAGGNGRRGPPGPVGGPGEQGPQGDAGRPGAAGRPGPAGPRGEPGTEYKPGQPGRPGPQ 221
Query: 828 VP 833
P
Sbjct: 222 GP 223
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +3
Query: 648 GAHPGRXXXGSPGGQXPXCXSGXXAPGXRPXXRXRXRPGGPRXWXXXXAXPPXPXXPHPX 827
G G G PG G RP R P GPR P P P P
Sbjct: 156 GPAGGNGRRGPPGPVGGPGEQGPQGDAGRPGAAGRPGPAGPRGEPGTEYKPGQPGRPGPQ 215
Query: 828 VP 833
P
Sbjct: 216 GP 217
>AF408760-1|AAO27839.1| 318|Caenorhabditis elegans unknown protein
protein.
Length = 318
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 388 PRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFEDLPVS-ARWTRTHEC 230
P++A+P + S + + + +P NS V ++S +P+S W R H C
Sbjct: 200 PKVAMPSELSYANVKRSSGYVDYMPTTYNSNVTSNSSAASVPMSPGTWVRCHYC 253
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,061,509
Number of Sequences: 27780
Number of extensions: 437127
Number of successful extensions: 1820
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1727
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -