Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_H06
(930 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 50 2e-06
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 50 2e-06
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 50 2e-06
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 49 4e-06
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 49 4e-06
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 49 4e-06
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 49 4e-06
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 49 5e-06
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 49 5e-06
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 49 5e-06
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 48 1e-05
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 48 1e-05
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 48 1e-05
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 47 2e-05
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 47 2e-05
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 46 3e-05
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 46 5e-05
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 46 5e-05
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 46 5e-05
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 46 5e-05
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 45 7e-05
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 45 7e-05
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 44 2e-04
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 44 2e-04
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 44 2e-04
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 42 5e-04
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 42 6e-04
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 42 8e-04
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 41 0.001
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 41 0.001
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 41 0.001
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 41 0.001
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 40 0.002
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 40 0.003
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 40 0.003
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 40 0.003
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 39 0.006
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 39 0.006
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 39 0.006
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 39 0.006
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 39 0.006
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 39 0.006
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 39 0.006
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 38 0.008
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 38 0.008
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 38 0.008
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 38 0.010
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 38 0.010
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 38 0.010
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 38 0.010
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 38 0.010
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 38 0.010
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 38 0.010
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 38 0.014
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 37 0.018
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 37 0.018
Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical pr... 37 0.024
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 37 0.024
U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic acety... 37 0.024
U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic acety... 37 0.024
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 36 0.031
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 36 0.031
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 36 0.041
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 36 0.041
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 36 0.041
Z74044-1|CAA98550.1| 548|Caenorhabditis elegans Hypothetical pr... 36 0.055
Z74039-11|CAA98508.1| 548|Caenorhabditis elegans Hypothetical p... 36 0.055
AF077307-1|AAC98095.1| 548|Caenorhabditis elegans acetyl cholin... 36 0.055
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 35 0.072
U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine r... 35 0.095
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 34 0.17
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 34 0.17
AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine... 34 0.17
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 34 0.17
AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholin... 34 0.17
Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical p... 33 0.22
AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic ace... 33 0.22
AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ... 33 0.22
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 33 0.29
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 33 0.38
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 32 0.67
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.89
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 0.89
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 31 0.89
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 0.89
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 0.89
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 31 0.89
Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical ... 31 1.2
Z83120-8|CAE46678.2| 511|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z83120-7|CAB51466.2| 514|Caenorhabditis elegans Hypothetical pr... 31 1.6
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 1.6
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 1.6
AY523515-1|AAR98637.1| 553|Caenorhabditis elegans acetylcholine... 31 1.6
AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical ... 31 1.6
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical pr... 30 2.7
U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 30 2.7
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 3.6
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 29 3.6
AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ... 29 3.6
Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical p... 29 4.7
Z81118-1|CAB03329.1| 478|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical pr... 29 4.7
AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A ... 29 4.7
AJ000537-1|CAA04170.1| 478|Caenorhabditis elegans GluClalpha2B ... 29 4.7
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical pr... 29 6.3
U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defecti... 29 6.3
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 28 8.3
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 28 8.3
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 28 8.3
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 8.3
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Frame = +2
Query: 140 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 305 WNAGEW-GCSTWLVSSERLWRPDVVLLNXXXXXXXXLRSPRPVYLNNGSVSW 457
W+ + G + V E +W PD+VL N S + G V+W
Sbjct: 90 WDPVNYGGVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTW 141
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Frame = +2
Query: 140 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 305 WNAGEW-GCSTWLVSSERLWRPDVVLLNXXXXXXXXLRSPRPVYLNNGSVSW 457
W+ + G + V E +W PD+VL N S + G V+W
Sbjct: 90 WDPVNYGGVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTW 141
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Frame = +2
Query: 140 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 305 WNAGEW-GCSTWLVSSERLWRPDVVLLNXXXXXXXXLRSPRPVYLNNGSVSW 457
W+ + G + V E +W PD+VL N S + G V+W
Sbjct: 90 WDPVNYGGVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTW 141
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 49.2 bits (112), Expect = 4e-06
Identities = 27/110 (24%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 316
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 317 EWG--CSTWLVSSERLWRPDVVLLN--XXXXXXXXLRSPRPVYLNNGSVS 454
+G TW + +++W PD+++ N +R+P ++ N V+
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTIVA 178
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 49.2 bits (112), Expect = 4e-06
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Frame = +2
Query: 131 LSLMIDSLLATYDRDSPP----DSKIVVNLTLHL-RHANIRESESTVRIQADLQMNWIDK 295
+S ++++LL Y++ P + V +L R ++ E + L+M W DK
Sbjct: 29 VSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDEVNQVLTTSLWLEMQWYDK 88
Query: 296 RLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 385
+L+WN +WG ++ + S+++W PD+VL N
Sbjct: 89 KLTWNPTDWGGVEYIHIPSDQIWIPDIVLYN 119
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 49.2 bits (112), Expect = 4e-06
Identities = 27/110 (24%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 316
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 317 EWG--CSTWLVSSERLWRPDVVLLN--XXXXXXXXLRSPRPVYLNNGSVS 454
+G TW + +++W PD+++ N +R+P ++ N V+
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTIVA 178
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 49.2 bits (112), Expect = 4e-06
Identities = 27/110 (24%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 316
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 317 EWG--CSTWLVSSERLWRPDVVLLN--XXXXXXXXLRSPRPVYLNNGSVS 454
+G TW + +++W PD+++ N +R+P ++ N V+
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTIVA 178
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 316
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 317 EWG--CSTWLVSSERLWRPDVVLLN 385
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 316
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 317 EWG--CSTWLVSSERLWRPDVVLLN 385
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 316
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 317 EWG--CSTWLVSSERLWRPDVVLLN 385
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNXXXXXXX 406
N+ E ++ L M W D +L+WN E+G S V S+R+W PD+VL N
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNADGNYE 158
Query: 407 XLRSPRPVYLNNGSVSWI 460
++G V+W+
Sbjct: 159 VSFKSNVFVDHHGDVTWV 176
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRI 262
T +A +E +S S + LL +++ SPPD ++ ++ + L H I E +++
Sbjct: 56 TVGVAEFSEQYQGSS-SRLTRHLLEKHNKCSPPDGRVDISHNIELVHIIGINELNQNMQV 114
Query: 263 QADLQMNWIDKRLSWNAGEW-GCS-TWLVSSERLWRPDVVLLN 385
+ W D LSW E+ G TWL +W PD+++ N
Sbjct: 115 LVYIVQQWTDASLSWKVEEFRGIKHTWL-PEHSIWIPDIIVFN 156
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNXXXXXXX 406
N+ E ++ L M W D +L+WN E+G S V S+R+W PD+VL N
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNADGNYE 158
Query: 407 XLRSPRPVYLNNGSVSWI 460
++G V+W+
Sbjct: 159 VSFKSNVFVDHHGDVTWV 176
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 239 ESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL-NXXXXXXXXL 412
E + ++ L +NW+D RLSWN W + R+W+PD++L+ N L
Sbjct: 154 ERNQALTTRSWLNINWMDPRLSWNESLWSEIKAIYIPHARIWKPDIILVNNAIREYYASL 213
Query: 413 RSPRPVYLNNGSVSWI 460
S + ++G+V+W+
Sbjct: 214 VSTDVMVTSDGNVTWL 229
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 46.8 bits (106), Expect = 2e-05
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+ + L+A Y++ P S+ +VV L L ++ E + LQ +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 305 WNAGEW-GCSTWLVSSERLWRPDVVLLNXXXXXXXXLRSPRPVYLNNGSVSW 457
W+ E+ G V S+ +W PDVVL N + NG+V W
Sbjct: 90 WDPVEYGGVEVLYVPSDTIWLPDVVLYNNADGNYQVTIMTKAKLTYNGTVEW 141
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 46.8 bits (106), Expect = 2e-05
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+ + L+A Y++ P S+ +VV L L ++ E + LQ +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 305 WNAGEW-GCSTWLVSSERLWRPDVVLLNXXXXXXXXLRSPRPVYLNNGSVSW 457
W+ E+ G V S+ +W PDVVL N + NG+V W
Sbjct: 90 WDPVEYGGVEVLYVPSDTIWLPDVVLYNNADGNYQVTIMTKAKLTYNGTVEW 141
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNXXXXXXX 406
++ E + + ++ L +W+D RLSWN E+G T + E LW PD++L N
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEMLWLPDIILYNNAHGSPW 103
Query: 407 XLRSPRPVYLNNGSVSW 457
+ + G V+W
Sbjct: 104 VSETTQVHVSFEGRVTW 120
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 45.6 bits (103), Expect = 5e-05
Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESES 250
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNXXXXXXXXLRSPRP 427
V + A L W D L W+ E+G T + + ++W+PDV+L N
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQTNM 127
Query: 428 VYLNNGSVSWI 460
+ + G V W+
Sbjct: 128 IVYSTGLVHWV 138
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 45.6 bits (103), Expect = 5e-05
Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESES 250
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNXXXXXXXXLRSPRP 427
V + A L W D L W+ E+G T + + ++W+PDV+L N
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQTNM 127
Query: 428 VYLNNGSVSWI 460
+ + G V W+
Sbjct: 128 IVYSTGLVHWV 138
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 45.6 bits (103), Expect = 5e-05
Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESES 250
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNXXXXXXXXLRSPRP 427
V + A L W D L W+ E+G T + + ++W+PDV+L N
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQTNM 127
Query: 428 VYLNNGSVSWI 460
+ + G V W+
Sbjct: 128 IVYSTGLVHWV 138
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 45.6 bits (103), Expect = 5e-05
Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESES 250
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNXXXXXXXXLRSPRP 427
V + A L W D L W+ E+G T + + ++W+PDV+L N
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQTNM 127
Query: 428 VYLNNGSVSWI 460
+ + G V W+
Sbjct: 128 IVYSTGLVHWV 138
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 45.2 bits (102), Expect = 7e-05
Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Frame = +2
Query: 164 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL- 340
YD ++P + L +L+ ++E + + + ++ W D RLSWNA W +T +
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTTMIY 122
Query: 341 VSSERLWRPDVVLLNXXXXXXXXLRSPRPVYLNNGSVSW 457
+ +++W P + + R + + N W
Sbjct: 123 MKQDKVWSPTISVFGVNDIVDFRDNDNRLICIENTGFIW 161
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 45.2 bits (102), Expect = 7e-05
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP--DSK--IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+I+ L++ Y R+ P DS +VV+L + L+ N+ E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 305 WNAGEWGCSTWL-VSSERLWRPDVVLLNXXXXXXXXLRSPRPVYLNNGSVSWI 460
W + T L + LW PD++L N V + G+++W+
Sbjct: 85 WEPTAYENVTDLRHPPDALWTPDILLYNSVDSEFDSSYKVNLVNYHTGNINWM 137
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNXXXXXXX 406
N+ E E + L M W D +L W+ ++ T + V+ E++W PD+VL N
Sbjct: 77 NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVLFNNADGNYE 136
Query: 407 XLRSPRPVYLNNGSVSWI 460
+ L+ G+V W+
Sbjct: 137 VSFMCNVLILSTGTVLWV 154
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 218 LRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNXXX 394
+R ++ E + L+M W D RL W+ G WG L V +++W PD++L N
Sbjct: 59 IRIIDVDEVNQVLTTNLWLEMQWFDYRLMWDPGRWGKIRKLHVPVDQIWIPDILLYNNAD 118
Query: 395 XXXXXLRSPRPVYLNNGSVSW 457
+ NG V W
Sbjct: 119 GEPHITIMSDAIVYYNGLVVW 139
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNXXXXXXX 406
N+ E E + L M W D +L W+ ++ T + V+ E++W PD+VL N
Sbjct: 77 NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVLFNNADGNYE 136
Query: 407 XLRSPRPVYLNNGSVSWI 460
+ L+ G+V W+
Sbjct: 137 VSFMCNVLILSTGTVLWV 154
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNXXXXXXX 406
N+ E E + L M W D +L W+ ++ T + V+ E++W PD+VL N
Sbjct: 77 NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVLFNNADGNYE 136
Query: 407 XLRSPRPVYLNNGSVSWI 460
+ L+ G+V W+
Sbjct: 137 VSFMCNVLILSTGTVLWV 154
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 42.3 bits (95), Expect = 5e-04
Identities = 20/95 (21%), Positives = 42/95 (44%)
Frame = +2
Query: 101 SAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQM 280
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 281 NWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 385
+W D +SW+ +WG S ++W P++V +N
Sbjct: 114 SWNDTMVSWDKEQWGLSWLNFYWIQIWTPNIVQIN 148
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 41.9 bits (94), Expect = 6e-04
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +2
Query: 194 IVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 367
++V + L L+ ++ E V + A L+ +W+D L W ++G T L +LW P
Sbjct: 51 VMVKMGLVLQQIVDVDEKNQVVDVNAWLKFSWVDYSLKWKPEDYGGVTDLRFRKGQLWTP 110
Query: 368 DVVLLNXXXXXXXXLRSPRPVYLNNGSVSWI 460
DV++ N + + NG V+W+
Sbjct: 111 DVLMYNSADPQFDSRYASNLLVYPNGLVNWM 141
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 41.5 bits (93), Expect = 8e-04
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 164 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLV 343
YD D+P + L +L+ + E E V + +L W D RLSWNA ++ T +
Sbjct: 65 YDPDAPQRYNYTLFL-YNLKLIQVNEPEEQVSVVLELMEYWYDPRLSWNASDYKNVTAIF 123
Query: 344 S-SERLWRP 367
+ E++W P
Sbjct: 124 TRQEKIWSP 132
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNXXXXXXX 406
+I E + L+M+W D L+W+ E+G + +W+PDV+L N
Sbjct: 63 DIDEKHQIMNSNVWLRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNSVDQQFD 122
Query: 407 XLRSPRPVYLNNGSVSWI 460
V L G+V+WI
Sbjct: 123 STWPVNAVVLYTGNVTWI 140
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 200 VNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVV 376
VN+ L + H + E E T + + WID+ + W+A + + +S+ LW+P +
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKLTISAHSLWQPALA 113
Query: 377 LLN 385
L N
Sbjct: 114 LYN 116
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 41.1 bits (92), Expect = 0.001
Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 8/124 (6%)
Frame = +2
Query: 113 CENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQ 277
C+ + + + + LL Y+ P + V + L L+ ++ E V + A L
Sbjct: 20 CDGSVAETKLFTDLLKGYNPLERPVQNSSQPLEVKIKLFLQQILDVDEKNQIVSVNAWLS 79
Query: 278 MNWIDKRLSWNAGEWG---CSTWLVSSERLWRPDVVLLNXXXXXXXXLRSPRPVYLNNGS 448
W D +L W ++G + SS+ +W+PDV+L N + + G+
Sbjct: 80 YTWFDHKLQWEPKKYGGIQDIRFPGSSDHIWKPDVLLYNSAAEDFDSTFKSNLLTYHTGT 139
Query: 449 VSWI 460
V WI
Sbjct: 140 VVWI 143
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNXXXXXXX 406
+I E + L+M+W D L+W+ E+G + +W+PDV+L N
Sbjct: 63 DIDEKHQIMNSNVWLRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNSVDQQFD 122
Query: 407 XLRSPRPVYLNNGSVSWI 460
V L G+V+WI
Sbjct: 123 STWPVNAVVLYTGNVTWI 140
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Frame = +2
Query: 95 IASAAECENATSLSLMIDSLLATYDRD-SPPDSKIVVNLTLH-LRHANIRESESTVRIQA 268
+ + A E + + +L+ TYD D P D +V +T + ++ +++ T++
Sbjct: 17 LTAVAFLETSNTETLLQQLFNQTYDVDMKPSDDLTMVTITPNTFILLSMDQTQETIQYSE 76
Query: 269 DLQMNWIDKRLSWNAGEWGC-STWL-VSSERLWRPDVVLLN 385
+ + W D L WN + W+ +S+ R W PDV+ N
Sbjct: 77 EFLLRWYDPILHWNQSAVSYENDWIKISASRAWIPDVIFTN 117
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 200 VNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVV 376
V + L++ H + E E T + L +W D+ L W ST ++S +LW+P +
Sbjct: 54 VAVYLNIAHVEKVDEHEQTALVHGHLMASWTDEYLKWERKATNISTLSIASSKLWQPALQ 113
Query: 377 LLN 385
L N
Sbjct: 114 LYN 116
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +2
Query: 233 IRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 385
+ E + V I L++ WID+ L+W+ ++G S V + ++W+PDV++ N
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYN 120
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +2
Query: 254 VRIQADLQMNWIDKRLSWNAGEWGCST---WLVSSERLWRPDVVLLNXXXXXXXXLRSPR 424
+ + A L+ W+D RL W+ ++ T + ++WRPD++L N
Sbjct: 12 IEVNAWLKYVWMDYRLQWDPLQYDNITSIRFAGGENQIWRPDILLYNSASEDFDSSFKSN 71
Query: 425 PVYLNNGSVSWI 460
V N G V+WI
Sbjct: 72 EVVYNTGEVNWI 83
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +2
Query: 233 IRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 385
+ E + V I L++ WID+ L+W+ ++G S V + ++W+PDV++ N
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYN 120
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Frame = +2
Query: 110 ECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NIRESESTVRIQADL 274
E + T + D L+ YD P + +++N++++ + +E T+ ++
Sbjct: 21 EVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVLTLDPAEETINFSSEF 80
Query: 275 QMNWIDKRLSWNAGEWGCSTWLVSSER-LWRPDVVL 379
+ W D+ L WN ++ TWL E LW PD +
Sbjct: 81 ILQWKDEFLFWNKSDYNI-TWLKLKESFLWTPDTTV 115
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +2
Query: 194 IVVNLTLHL-RHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 367
++V + L L N+ E + + L + W D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 368 DVVLLNXXXXXXXXLRSPRPVYLNNGSVSWI 460
D+VL N V + G + W+
Sbjct: 116 DIVLFNNADGNYEVSFMCNVVINHKGDMLWV 146
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 206 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 367
L +L+ ++E E V + +L W D RLSWN+ + T V E++W P
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNSSLYSNIPTVFVRQEKVWSP 133
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +2
Query: 194 IVVNLTLHL-RHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 367
++V + L L N+ E + + L + W D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 368 DVVLLNXXXXXXXXLRSPRPVYLNNGSVSWI 460
D+VL N V + G + W+
Sbjct: 116 DIVLFNNADGNYEVSFMCNVVINHKGDMLWV 146
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +2
Query: 194 IVVNLTLHL-RHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 367
++V + L L N+ E + + L + W D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 368 DVVLLNXXXXXXXXLRSPRPVYLNNGSVSWI 460
D+VL N V + G + W+
Sbjct: 116 DIVLFNNADGNYEVSFMCNVVINHKGDMLWV 146
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Frame = +2
Query: 179 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSER 355
PP +++ + + + L+ ++ E E V D W D+RL WN E+ G S V
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHIYVPQRM 109
Query: 356 LWRPDVVLLNXXXXXXXXL-RSPRPVYLN-NGSVSW 457
+W P+V + + +PR ++N NG+ +
Sbjct: 110 IWLPEVTIADAHEVKFFESDDAPRTAWINYNGTTGF 145
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 38.7 bits (86), Expect = 0.006
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 254 VRIQADLQMNWIDKRLSWNAGEWGCSTW-LVSSERLWRPDV 373
+ I L+++W D+RL WN EW L S RLW PD+
Sbjct: 101 MNINGFLKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 38.7 bits (86), Expect = 0.006
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 254 VRIQADLQMNWIDKRLSWNAGEWGCSTW-LVSSERLWRPDV 373
+ I L+++W D+RL WN EW L S RLW PD+
Sbjct: 101 MNINGFLKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 38.3 bits (85), Expect = 0.008
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP---DSKIVVNLTLHLRHANIR---ESESTVRIQADLQMNWIDKRL 301
+I L Y ++ P +S N+T+ L I+ E++ + + ++ W D+ L
Sbjct: 27 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 86
Query: 302 SWNAGEWG-CSTWLVSSERLWRPDVVLLN 385
+WN ++G + V SE +W+PD+++ N
Sbjct: 87 TWNPSDFGNIKSLHVPSEMIWKPDLLVYN 115
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 38.3 bits (85), Expect = 0.008
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP---DSKIVVNLTLHLRHANIR---ESESTVRIQADLQMNWIDKRL 301
+I L Y ++ P +S N+T+ L I+ E++ + + ++ W D+ L
Sbjct: 27 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 86
Query: 302 SWNAGEWG-CSTWLVSSERLWRPDVVLLN 385
+WN ++G + V SE +W+PD+++ N
Sbjct: 87 TWNPSDFGNIKSLHVPSEMIWKPDLLVYN 115
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 38.3 bits (85), Expect = 0.008
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP---DSKIVVNLTLHLRHANIR---ESESTVRIQADLQMNWIDKRL 301
+I L Y ++ P +S N+T+ L I+ E++ + + ++ W D+ L
Sbjct: 11 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 70
Query: 302 SWNAGEWG-CSTWLVSSERLWRPDVVLLN 385
+WN ++G + V SE +W+PD+++ N
Sbjct: 71 TWNPSDFGNIKSLHVPSEMIWKPDLLVYN 99
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 37.9 bits (84), Expect = 0.010
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 218 LRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 385
+R ++ E + L+M W D +L+W ++ G T + S+ +W PD+VL N
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYN 128
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 37.9 bits (84), Expect = 0.010
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Frame = +2
Query: 146 DSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW- 322
+SL+ S P ++ +L L N+ E ++ M W D ++ W+ E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 323 GCSTWLVSSERLWRPDVVLLNXXXXXXXXLRSPRPVYLNNGSVSWI 460
G T V +++W PD+VL N V + G + W+
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNADGNYLVSFYSNVVVEHTGDMLWV 142
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 37.9 bits (84), Expect = 0.010
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Frame = +2
Query: 146 DSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW- 322
+SL+ S P ++ +L L N+ E ++ M W D ++ W+ E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 323 GCSTWLVSSERLWRPDVVLLNXXXXXXXXLRSPRPVYLNNGSVSWI 460
G T V +++W PD+VL N V + G + W+
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNADGNYLVSFYSNVVVEHTGDMLWV 142
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/64 (23%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 197 VVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDV 373
+V++ H+ H +I + E T+ + + M W D+ L W+ ++ + V ++W+P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 374 VLLN 385
+ N
Sbjct: 134 KVSN 137
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/64 (23%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 197 VVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDV 373
+V++ H+ H +I + E T+ + + M W D+ L W+ ++ + V ++W+P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 374 VLLN 385
+ N
Sbjct: 134 KVSN 137
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 37.9 bits (84), Expect = 0.010
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 218 LRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 385
+R ++ E + L+M W D +L+W ++ G T + S+ +W PD+VL N
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYN 128
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +2
Query: 179 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSER 355
PP +I + L++ ++ + E E D + +W D RLSW+ ++G + V +
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHIYVPRSK 137
Query: 356 LWRPDVVLLNXXXXXXXXLRSPRPVYL-NNGSV 451
+W P+ +++ R +L +NGS+
Sbjct: 138 VWIPETTIVDCSEIKVFDNEYTRYAWLHSNGSI 170
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 37.5 bits (83), Expect = 0.014
Identities = 22/69 (31%), Positives = 26/69 (37%)
Frame = +3
Query: 615 PXXGTVGMXTGFLSPVXGQXPGPLGXGGXPXVGIGPXXXFSGXTXPXXXGPXGAAXRXSX 794
P G G+ +P G PGP G G P G GP F+ P GP G
Sbjct: 162 PSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSG-GPPGPFNPSEAPPSGGPTGPFDPSGA 220
Query: 795 XGAXGPGXP 821
+ GP P
Sbjct: 221 PPSGGPPGP 229
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/69 (30%), Positives = 23/69 (33%)
Frame = +3
Query: 615 PXXGTVGMXTGFLSPVXGQXPGPLGXGGXPXVGIGPXXXFSGXTXPXXXGPXGAAXRXSX 794
P G G +P G PGP G P G GP F P GP G
Sbjct: 207 PSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSG-GPPGPFDPSGAPPSGGPPGPFNPSGA 265
Query: 795 XGAXGPGXP 821
+ GP P
Sbjct: 266 PPSGGPPGP 274
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/69 (30%), Positives = 24/69 (34%)
Frame = +3
Query: 615 PXXGTVGMXTGFLSPVXGQXPGPLGXGGXPXVGIGPXXXFSGXTXPXXXGPXGAAXRXSX 794
P G G +P G PGP G P G GP F+ P GP G
Sbjct: 402 PSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSG-GPPGPFNPSGAPPSGGPPGPFNPSGA 460
Query: 795 XGAXGPGXP 821
+ GP P
Sbjct: 461 PPSGGPPGP 469
Score = 33.1 bits (72), Expect = 0.29
Identities = 21/69 (30%), Positives = 24/69 (34%)
Frame = +3
Query: 615 PXXGTVGMXTGFLSPVXGQXPGPLGXGGXPXVGIGPXXXFSGXTXPXXXGPXGAAXRXSX 794
P G G +P G PGP G P G GP F+ P GP G
Sbjct: 312 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSG-GPPGPFNPSGAPPSGGPPGPFDPSGA 370
Query: 795 XGAXGPGXP 821
+ GP P
Sbjct: 371 PPSGGPPGP 379
Score = 33.1 bits (72), Expect = 0.29
Identities = 21/69 (30%), Positives = 24/69 (34%)
Frame = +3
Query: 615 PXXGTVGMXTGFLSPVXGQXPGPLGXGGXPXVGIGPXXXFSGXTXPXXXGPXGAAXRXSX 794
P G G +P G PGP G P G GP F+ P GP G
Sbjct: 387 PSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSG-GPPGPFNPSGAPPSGGPPGPFNPSGA 445
Query: 795 XGAXGPGXP 821
+ GP P
Sbjct: 446 PPSGGPPGP 454
Score = 33.1 bits (72), Expect = 0.29
Identities = 21/69 (30%), Positives = 23/69 (33%)
Frame = +3
Query: 615 PXXGTVGMXTGFLSPVXGQXPGPLGXGGXPXVGIGPXXXFSGXTXPXXXGPXGAAXRXSX 794
P G G +P G PGP G P G GP F P GP G
Sbjct: 447 PSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSG-GPPGPFDPSGAPPSGGPPGPFNPSGA 505
Query: 795 XGAXGPGXP 821
+ GP P
Sbjct: 506 PPSGGPPGP 514
Score = 32.7 bits (71), Expect = 0.38
Identities = 21/69 (30%), Positives = 23/69 (33%)
Frame = +3
Query: 615 PXXGTVGMXTGFLSPVXGQXPGPLGXGGXPXVGIGPXXXFSGXTXPXXXGPXGAAXRXSX 794
P G G +P G PGP G P G GP F P GP G
Sbjct: 252 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSG-GPPGPFDPSGAPPSGGPPGPFDPSGA 310
Query: 795 XGAXGPGXP 821
+ GP P
Sbjct: 311 QPSGGPPGP 319
Score = 32.3 bits (70), Expect = 0.51
Identities = 21/69 (30%), Positives = 23/69 (33%)
Frame = +3
Query: 615 PXXGTVGMXTGFLSPVXGQXPGPLGXGGXPXVGIGPXXXFSGXTXPXXXGPXGAAXRXSX 794
P G G +P G PGP G P G GP F P GP G
Sbjct: 357 PSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSG-GPPGPFDPSGAPPSGGPPGPFNPSGA 415
Query: 795 XGAXGPGXP 821
+ GP P
Sbjct: 416 PPSGGPPGP 424
Score = 31.5 bits (68), Expect = 0.89
Identities = 18/56 (32%), Positives = 20/56 (35%)
Frame = +3
Query: 654 SPVXGQXPGPLGXGGXPXVGIGPXXXFSGXTXPXXXGPXGAAXRXSXXGAXGPGXP 821
+P G PGP G P G GP F P GP G + GP P
Sbjct: 145 APPSGGPPGPFDPSGAPPSG-GPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGP 199
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 37.1 bits (82), Expect = 0.018
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Frame = +2
Query: 110 ECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLH-LRHANIRESESTVRIQADL 274
E + T + D L+ YD P + +N++++ + + +E T+ +
Sbjct: 21 EIDGITVSEQLKDVLMEGYDSSIRPVINERDTLFINISINSMSFLTLDPAEETINFSGEF 80
Query: 275 QMNWIDKRLSWNAGEWGCSTWLVSSER-LWRPDVVL 379
+ W D+ L WN ++ TWL E LW PD +
Sbjct: 81 ILQWKDEFLFWNKSDYNI-TWLKLKESFLWTPDTTV 115
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 37.1 bits (82), Expect = 0.018
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP--DSKIVVNLTLHL---RHANIRESESTVRIQADLQMNWIDKRLS 304
++ L YD P D + VN+ L L + ++ E + + Q W D +L
Sbjct: 28 LLKDLREGYDPVERPVADHRKPVNVKLRLILQQLVDVDERNQVITLVVWNQYTWNDYKLR 87
Query: 305 WNAGEWGCSTWL-VSSERLWRPDVVLLN 385
W+ E+G T L + LW+PD++L N
Sbjct: 88 WSPEEYGNITTLQIPHGTLWKPDILLFN 115
>Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical
protein K03B8.9 protein.
Length = 564
Score = 36.7 bits (81), Expect = 0.024
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 173 DSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSS 349
D K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++
Sbjct: 73 DHKKSLKVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPF 131
Query: 350 ERLWRPDVVLLN 385
LW PD L N
Sbjct: 132 HHLWIPDTYLYN 143
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 36.7 bits (81), Expect = 0.024
Identities = 17/68 (25%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +2
Query: 194 IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL---VSSERLW 361
+VV++ ++L+ ++ E + + A ++ W D +L W+ E+G + ++ +W
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYGGIKDIRIPGNANAIW 112
Query: 362 RPDVVLLN 385
+PDV+L N
Sbjct: 113 KPDVLLYN 120
>U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit precursor protein.
Length = 564
Score = 36.7 bits (81), Expect = 0.024
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 173 DSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSS 349
D K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++
Sbjct: 73 DHKKSLKVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPF 131
Query: 350 ERLWRPDVVLLN 385
LW PD L N
Sbjct: 132 HHLWIPDTYLYN 143
>U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 564
Score = 36.7 bits (81), Expect = 0.024
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 173 DSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSS 349
D K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++
Sbjct: 73 DHKKSLKVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPF 131
Query: 350 ERLWRPDVVLLN 385
LW PD L N
Sbjct: 132 HHLWIPDTYLYN 143
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 36.3 bits (80), Expect = 0.031
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +2
Query: 116 ENATSLS-LMIDSLLATYDRDSPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWI 289
E+A L+ L I +A+ + + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 290 DKRLSWNAGEWGCSTWLVSS-ERLWRP 367
D RL WN W + +V S +W P
Sbjct: 93 DDRLMWNQDTWKKNKLVVHSFHHIWVP 119
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 36.3 bits (80), Expect = 0.031
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Frame = +2
Query: 104 AAECENATSL----SLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA-NIRESESTVRI 262
A CEN +L S +++ + YDR P ++VN+T+ L ++E++
Sbjct: 57 ALNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVLGILIELKENQQLAAY 116
Query: 263 QADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 385
W D RLSW+ ++ G +V +W P + + N
Sbjct: 117 VISHTQRWYDGRLSWDPSKYRGQREVIVPQTMVWIPKLFVYN 158
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 35.9 bits (79), Expect = 0.041
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 206 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 367
L +L+ ++E V + +L W D RLSWN + ST E++W P
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWNISLYSNVSTIFARQEKVWSP 133
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 35.9 bits (79), Expect = 0.041
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Frame = +2
Query: 86 TCAIASAAECE-NATSLSLMIDSLLATYDRDS-PPDSKIVVNLTLHLRH-ANIRESESTV 256
T ++ A CE N+ ++ LL YD+ P ++ + V++ L ++ ++I E S+
Sbjct: 20 TESLVDPAHCEYNSNHRKSILTDLLQDYDKTMVPSNNSVQVSVELTVQDISSISEISSSF 79
Query: 257 RIQADLQMNWIDKRLSWNAGEWGCSTWLVS--SERLWRPDVVLLN 385
W D RL + + L S SERLW P+V +N
Sbjct: 80 IADVWFSQVWYDPRLEYRNISCKTNLSLDSYVSERLWTPNVCFVN 124
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 35.9 bits (79), Expect = 0.041
Identities = 20/84 (23%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Frame = +2
Query: 152 LLATYDRDSPPD--SKIVVNLTLHL---RHANIRESESTVRIQADLQMNWIDKRLSWNAG 316
LL Y+ + P SK +N+T + ++ E + + ++++W+D +L W+
Sbjct: 7 LLYDYNNEVRPSVHSKEPINVTFVFSLTQIIDVDERNQILTTNSWIRLHWVDYKLVWDPR 66
Query: 317 EWGCSTWL-VSSERLWRPDVVLLN 385
+ T + + S+++W+PD++L N
Sbjct: 67 LYQNVTRIHIPSDKIWKPDIILYN 90
>Z74044-1|CAA98550.1| 548|Caenorhabditis elegans Hypothetical
protein T26H10.1 protein.
Length = 548
Score = 35.5 bits (78), Expect = 0.055
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHL---RHANIRESES 250
T A A+ T + L+ D LL YD+ + P D+ +N++ + + + E +
Sbjct: 12 TTASLCIADTPVPTQIRLVHD-LLDNYDKKAKPMWDNSKPINVSFSMDLYQILELNEPQQ 70
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 385
+ + A + W D+ L WN ++ T L + + +W PD L N
Sbjct: 71 YILLNAWIIERWFDEFLYWNPDDYENITELRLPYDSIWLPDTTLYN 116
>Z74039-11|CAA98508.1| 548|Caenorhabditis elegans Hypothetical
protein T26H10.1 protein.
Length = 548
Score = 35.5 bits (78), Expect = 0.055
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHL---RHANIRESES 250
T A A+ T + L+ D LL YD+ + P D+ +N++ + + + E +
Sbjct: 12 TTASLCIADTPVPTQIRLVHD-LLDNYDKKAKPMWDNSKPINVSFSMDLYQILELNEPQQ 70
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 385
+ + A + W D+ L WN ++ T L + + +W PD L N
Sbjct: 71 YILLNAWIIERWFDEFLYWNPDDYENITELRLPYDSIWLPDTTLYN 116
>AF077307-1|AAC98095.1| 548|Caenorhabditis elegans acetyl choline
receptor alpha subunitDES-2 protein.
Length = 548
Score = 35.5 bits (78), Expect = 0.055
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHL---RHANIRESES 250
T A A+ T + L+ D LL YD+ + P D+ +N++ + + + E +
Sbjct: 12 TTASLCIADTPVPTQIRLVHD-LLDNYDKKAKPMWDNSKPINVSFSMDLYQILELNEPQQ 70
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 385
+ + A + W D+ L WN ++ T L + + +W PD L N
Sbjct: 71 YILLNAWIIERWFDEFLYWNPDDYENITELRLPYDSIWLPDTTLYN 116
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 35.1 bits (77), Expect = 0.072
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 212 LHLRHAN-IRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 364
LH+ H + I++ + +++ W+D+RL WN + G T+ + +WR
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNYSGIRTFSTTRHEMWR 114
>U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine
receptor protein 5 protein.
Length = 548
Score = 34.7 bits (76), Expect = 0.095
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 200 VNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDV 373
VNL++ L ++ E ++ + + +W D+ L WN ++G + +V ++W PD
Sbjct: 133 VNLSMSLYQILDVDEHMQSIEVNVWMVQHWYDEFLDWNPVDYGMINRTIVPYHQIWIPDT 192
Query: 374 VLLN 385
L N
Sbjct: 193 YLYN 196
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +2
Query: 164 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWL 340
YD D+P + L L+ + E V + ++ W D RLSWNA + T+
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNASLYDDIDTFY 122
Query: 341 VSSERLWRP 367
+W P
Sbjct: 123 TRQSNVWSP 131
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 33.9 bits (74), Expect = 0.17
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG------CSTWLVSSERLWRPDVVLLNXX 391
++ E + I A + +W D +L+W+ +G S +S +LWRPDV+L N
Sbjct: 59 DVDEKNQVMSILAYMDYHWNDYKLTWDPKLFGGIRDVRFSGDDDASFKLWRPDVLLFNSV 118
Query: 392 XXXXXXLRSPRPVYLNNGSV 451
S R + +NG V
Sbjct: 119 SESFDSTYSSRFIVSSNGDV 138
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +2
Query: 197 VVNLTLHLRHAN---IRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 364
V+N+T+ + N + E ++I +W D L+W+ EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 365 PDVVLLN 385
PD + N
Sbjct: 120 PDGYIFN 126
>AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine
receptor (62.5 kD)(acr-23) protein.
Length = 545
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 188 SKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVS-SERLW 361
S I V L+L L + E + + + A W+D+ L W+ E+ T +++ + +W
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 362 RPDVVLLN 385
PD L N
Sbjct: 110 LPDTTLYN 117
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +2
Query: 197 VVNLTLHLRHAN---IRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 364
V+N+T+ + N + E ++I +W D L+W+ EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 365 PDVVLLN 385
PD + N
Sbjct: 120 PDGYIFN 126
>AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholine
receptor protein 23 protein.
Length = 545
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 188 SKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVS-SERLW 361
S I V L+L L + E + + + A W+D+ L W+ E+ T +++ + +W
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 362 RPDVVLLN 385
PD L N
Sbjct: 110 LPDTTLYN 117
>Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical
protein AC3.6 protein.
Length = 325
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 654 SPVXGQXPGPLGXGGXPXVGIGPXXXFSGXTXPXXXGPXGAAXRXSXXGAXG-PGXPXG 827
SP PG +G GG P GP + P GP G A + G G PG P G
Sbjct: 219 SPGPAGSPGRVGRGGPP----GPDGGYPMSGEPGSSGPQGKAGQPGGPGVDGHPGRPGG 273
>Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical
protein T09A5.3 protein.
Length = 538
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 182 PDSKIVVNLTLHLRHANIRESE-STVRIQADLQMNWIDKRLSWNAGEWG--CSTWLVSSE 352
P + V + + ++ + +++ + + A L+ W D RL WN ++ S +
Sbjct: 52 PKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGED 111
Query: 353 RLWRPDVVLLN 385
++W+PD++L N
Sbjct: 112 QIWQPDILLYN 122
>AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-7 protein.
Length = 538
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 182 PDSKIVVNLTLHLRHANIRESE-STVRIQADLQMNWIDKRLSWNAGEWG--CSTWLVSSE 352
P + V + + ++ + +++ + + A L+ W D RL WN ++ S +
Sbjct: 52 PKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGED 111
Query: 353 RLWRPDVVLLN 385
++W+PD++L N
Sbjct: 112 QIWQPDILLYN 122
>AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ion
channel protein 5 protein.
Length = 340
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +2
Query: 161 TYDRD-SPPDSKIVVNLTLH-LRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCS- 331
TYD + P D+ V +T + ++ +++ T+ + + W D L WN + +
Sbjct: 39 TYDVNVKPSDTLTTVTITPNTFLLLSMDQTQETILFSQEFLLKWYDPILHWNRTLFDYNR 98
Query: 332 TWL-VSSERLWRPDVV 376
W+ +S R+W PDV+
Sbjct: 99 EWIKISVSRVWVPDVI 114
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 33.1 bits (72), Expect = 0.29
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Frame = +2
Query: 110 ECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRE-SESTVRIQADLQMN- 283
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 284 -WIDKRLSWNAGEWGCSTWL---VSS--ERLWRPDVVLLN 385
W D RLS+ C+T + VS +++W PD ++N
Sbjct: 68 IWQDPRLSFKHLN-VCATNITLKVSDFRKKIWTPDTCIIN 106
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +3
Query: 675 PGPLGXGGXPXVGIGPXXXFSGXTXPXXXGPXGAAXRXSXXGAXG-PGXP 821
PGP G G P G GP +G + P GP G A G G PG P
Sbjct: 173 PGPDGTPGEPG-GPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQPGGP 221
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 31.9 bits (69), Expect = 0.67
Identities = 20/55 (36%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = +3
Query: 675 PGPLGXGGX--PXVGIGPXXXFSGXTXPXXXGPXGAAXRXSXXGAXGP-GXPXGG 830
PGP G G P GP +G P GP G GA GP G P G
Sbjct: 173 PGPDGNAGPAGPAGAAGPDGEGAGYAEPGPAGPAGPPGPDGQPGAPGPDGQPGAG 227
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.89
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Frame = +3
Query: 657 PVXGQXPGPLGXGGXPXV--GIGPXXXFSGXTXPXXXGPXGAAXRXSXXGAXG-PGXP 821
P G PGP G G P G +G + P GP G A GA G PG P
Sbjct: 149 PCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGP 206
Score = 28.3 bits (60), Expect = 8.3
Identities = 23/73 (31%), Positives = 24/73 (32%), Gaps = 7/73 (9%)
Frame = +3
Query: 624 GTVGMXTGFLSPVXGQXPGPLGXGGX---PXVGIGPXXXFS----GXTXPXXXGPXGAAX 782
G G G P PGP G G P GP + G P GP G A
Sbjct: 171 GNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAG 230
Query: 783 RXSXXGAXGPGXP 821
GA G G P
Sbjct: 231 PAGNDGAPGTGGP 243
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.5 bits (68), Expect = 0.89
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Frame = +3
Query: 657 PVXGQXPGPLGXGGXPXV--GIGPXXXFSGXTXPXXXGPXGAAXRXSXXGAXG-PGXP 821
P G PGP G G P G +G + P GP G A GA G PG P
Sbjct: 149 PCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGP 206
Score = 28.3 bits (60), Expect = 8.3
Identities = 23/73 (31%), Positives = 24/73 (32%), Gaps = 7/73 (9%)
Frame = +3
Query: 624 GTVGMXTGFLSPVXGQXPGPLGXGGX---PXVGIGPXXXFS----GXTXPXXXGPXGAAX 782
G G G P PGP G G P GP + G P GP G A
Sbjct: 171 GNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAG 230
Query: 783 RXSXXGAXGPGXP 821
GA G G P
Sbjct: 231 PAGNDGAPGTGGP 243
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 31.5 bits (68), Expect = 0.89
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = -3
Query: 880 GNAXPPXXRXSXXXPXXP-PXGXPGPXAPXXEXRXAAPXGPXXXGXVXPEKXI 725
G PP + P P P G PGP P A P GP EK I
Sbjct: 232 GPPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDGQAGPPGPPGQAGTPGEKGI 284
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.5 bits (68), Expect = 0.89
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Frame = +3
Query: 657 PVXGQXPGPLGXGGXPXV--GIGPXXXFSGXTXPXXXGPXGAAXRXSXXGAXG-PGXP 821
P G PGP G G P G +G + P GP G A GA G PG P
Sbjct: 149 PCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGP 206
Score = 28.3 bits (60), Expect = 8.3
Identities = 23/73 (31%), Positives = 24/73 (32%), Gaps = 7/73 (9%)
Frame = +3
Query: 624 GTVGMXTGFLSPVXGQXPGPLGXGGX---PXVGIGPXXXFS----GXTXPXXXGPXGAAX 782
G G G P PGP G G P GP + G P GP G A
Sbjct: 171 GNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAG 230
Query: 783 RXSXXGAXGPGXP 821
GA G G P
Sbjct: 231 PAGNDGAPGTGGP 243
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.89
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Frame = +3
Query: 657 PVXGQXPGPLGXGGXPXV--GIGPXXXFSGXTXPXXXGPXGAAXRXSXXGAXG-PGXP 821
P G PGP G G P G +G + P GP G A GA G PG P
Sbjct: 149 PCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGP 206
Score = 28.3 bits (60), Expect = 8.3
Identities = 23/73 (31%), Positives = 24/73 (32%), Gaps = 7/73 (9%)
Frame = +3
Query: 624 GTVGMXTGFLSPVXGQXPGPLGXGGX---PXVGIGPXXXFS----GXTXPXXXGPXGAAX 782
G G G P PGP G G P GP + G P GP G A
Sbjct: 171 GNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAG 230
Query: 783 RXSXXGAXGPGXP 821
GA G G P
Sbjct: 231 PAGNDGAPGTGGP 243
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 31.5 bits (68), Expect = 0.89
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = -3
Query: 880 GNAXPPXXRXSXXXPXXP-PXGXPGPXAPXXEXRXAAPXGPXXXGXVXPEKXI 725
G PP + P P P G PGP P A P GP EK I
Sbjct: 232 GPPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDGQAGPPGPPGQAGTPGEKGI 284
>Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical
protein T01H10.7 protein.
Length = 399
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 164 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL- 340
Y+ +P V+L +L+ + E E V + ++ W D R++W++ +G L
Sbjct: 64 YNPLAPKRFNYTVSL-YYLKLVEVIEPEEKVSVVLEMAEYWYDPRIAWDSSLYGDIKMLH 122
Query: 341 VSSERLWRPDVVL 379
+ +++W P + L
Sbjct: 123 MRQDKVWSPTLSL 135
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +3
Query: 675 PGPLGXGGXPXVGIGPXXXFSGXTXPXXXGPXGAAXRXSXXGAXGPGXPXGGXXG 839
PGP G G P G GP G GP G + G GP G G
Sbjct: 217 PGPAGPPGPPGPG-GPPGDAGGAGSDGAPGPQGPPGQDGTPGNAGPDGQPGSPGG 270
>AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical
protein C04C3.2 protein.
Length = 464
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSK----IVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLS 304
+I+++ YD+ P ++ ++V++T+ L +RE++ W D +L+
Sbjct: 44 LIETIQRRYDKRVRPFAESNRPVIVHMTIVLGILTEVRENQQVASFVISHVQKWRDPKLA 103
Query: 305 WNAGEWGCSTWLVSSERL-WRPDVVLLN 385
WN + T +V L W P + + N
Sbjct: 104 WNPADHSGLTQVVMPRSLVWVPKLFIYN 131
>Z83120-8|CAE46678.2| 511|Caenorhabditis elegans Hypothetical
protein R06A4.10b protein.
Length = 511
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 188 SKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LW 361
S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++ +W
Sbjct: 5 SPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIW 64
Query: 362 RPDVVLLN 385
PD L N
Sbjct: 65 LPDTTLYN 72
>Z83120-7|CAB51466.2| 514|Caenorhabditis elegans Hypothetical
protein R06A4.10a protein.
Length = 514
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 188 SKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LW 361
S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++ +W
Sbjct: 5 SPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIW 64
Query: 362 RPDVVLLN 385
PD L N
Sbjct: 65 LPDTTLYN 72
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = -3
Query: 880 GNAXPPXXRXSXXXPXXP-PXGXPGPXAPXXEXRXAAPXGPXXXGXVXPEKXI 725
G PP + P P P G PGP P + P GP EK I
Sbjct: 225 GPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGEKGI 277
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = -3
Query: 880 GNAXPPXXRXSXXXPXXP-PXGXPGPXAPXXEXRXAAPXGPXXXGXVXPEKXI 725
G PP + P P P G PGP P + P GP EK I
Sbjct: 225 GPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGEKGI 277
>AY523515-1|AAR98637.1| 553|Caenorhabditis elegans acetylcholine
receptor 20 (63.9kD) alternative variant a protein.
Length = 553
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 188 SKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LW 361
S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++ +W
Sbjct: 47 SPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIW 106
Query: 362 RPDVVLLN 385
PD L N
Sbjct: 107 LPDTTLYN 114
>AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical
protein F09G2.5 protein.
Length = 563
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 385
L M W D+RL+ N T + ++R+W PD+ +N
Sbjct: 175 LAMGWFDRRLAHNCTHPILVTSKLIADRIWYPDLYFVN 212
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = -3
Query: 880 GNAXPPXXRXSXXXPXXP-PXGXPGPXAPXXEXRXAAPXGPXXXGXVXPEKXI 725
G PP + P P P G PGP P + P GP EK I
Sbjct: 230 GPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGVDGQSGPPGPPGPAGTPGEKGI 282
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +3
Query: 675 PGPLGXGGXPXVGIGPXXXFSGXTXPXXXGPXGAAXRXSXXGAXGPGXPXGG 830
PGP G G P GP G + P GP G G+ G GG
Sbjct: 171 PGPAGPAGPPGPP-GPDGAPGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGG 221
>Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical
protein F11A5.10 protein.
Length = 461
Score = 29.9 bits (64), Expect = 2.7
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Frame = +2
Query: 125 TSLSLMIDSLLAT-YD-RDSPPDSK---IVVNLTLHLRH-ANIRESESTVRIQADLQMNW 286
TS S ++ L + YD R PP +VV++ + LR + I Q L+ +W
Sbjct: 61 TSDSKILAHLFTSGYDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESW 120
Query: 287 IDKRLSWNAGEWGCSTWLVSS--ERLWRPDVVLLN 385
IDKRLS+ G +++ + ++W PD N
Sbjct: 121 IDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPN 155
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +3
Query: 675 PGPLGXGGXPXVGIGPXXXFSGXTXPXXXGPXGAAXRXSXXGAXGPGXPXGG 830
PGP G G P GP G + P GP G G+ G GG
Sbjct: 171 PGPAGPAGPPGPP-GPDGAPGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGG 221
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Frame = +3
Query: 657 PVXGQXPGPLGXGGXPXVG--IGPXXXFSGXTXPXXXGPXGAAXRXSXXGAXGPGXPXG 827
P G GP G G P V GP P GP G A G GP P G
Sbjct: 145 PCPGGEAGPPGPDGEPGVRGPNGPPGPNGHPGQPGRPGPAGPAGPEGKDGPVGPHGPAG 203
>Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical
protein B0491.4 protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 233 IRESESTVRIQADLQMNWIDKRLSWN-AGEWGC--STWLVSSERLWRPDVV 376
++ S + D+ +NW D+R+ W+ GE+ ++ +S +W P V+
Sbjct: 83 VKGSSYQFNVFGDIYLNWKDERMKWDKKGEFENYEHLYIFNSSAIWTPHVI 133
>U14524-1|AAA50785.1| 461|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl alpha protein.
Length = 461
Score = 29.9 bits (64), Expect = 2.7
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Frame = +2
Query: 125 TSLSLMIDSLLAT-YD-RDSPPDSK---IVVNLTLHLRH-ANIRESESTVRIQADLQMNW 286
TS S ++ L + YD R PP +VV++ + LR + I Q L+ +W
Sbjct: 61 TSDSKILAHLFTSGYDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESW 120
Query: 287 IDKRLSWNAGEWGCSTWLVSS--ERLWRPDVVLLN 385
IDKRLS+ G +++ + ++W PD N
Sbjct: 121 IDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPN 155
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -3
Query: 880 GNAXPPXXRXSXXXPXXPPXGXPGPXAPXXEXRXAAPXGPXXXG 749
G A PP + P PP G PGP P E P GP G
Sbjct: 146 GPAGPPGPDGNKG-PLGPP-GPPGPEGPNGEPGNKGPAGPPGPG 187
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = -3
Query: 928 PPXPXGXXTXXAXXXXGNAXPPXXRXSXXXPXXPPXGXPGPXAPXXEXRXAAPXGPXXXG 749
PP P G A G A P + + P G PGP P E A GP G
Sbjct: 181 PPGPDGKP--GAAGSDGEAGAPGTKTTNAPGEPGPAGPPGPPGPNGE--AGAGSGPGPEG 236
Query: 748 XVXP 737
P
Sbjct: 237 PAGP 240
>AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ion
channel protein 12 protein.
Length = 425
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 233 IRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 385
+ E +++ +W D L W+ EW G + +W PD + N
Sbjct: 68 VNEQNEQIKLLIWFPQSWKDDYLVWDPDEWDGIEKITIPKSMVWLPDGYIFN 119
>Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical
protein R11G10.1a protein.
Length = 657
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 194 IVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLV--SSERLWR 364
+VV++ + LR + I +Q + +W+DKRLS+ +L+ + + +W
Sbjct: 281 VVVSVNMLLRSISKIDNVNMEYSVQLTFRESWVDKRLSFGVKGDAQPDFLILTAGQEIWM 340
Query: 365 PDVVLLN 385
PD N
Sbjct: 341 PDSFFQN 347
>Z81118-1|CAB03329.1| 478|Caenorhabditis elegans Hypothetical
protein R11G10.1b protein.
Length = 478
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 194 IVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLV--SSERLWR 364
+VV++ + LR + I +Q + +W+DKRLS+ +L+ + + +W
Sbjct: 102 VVVSVNMLLRSISKIDNVNMEYSVQLTFRESWVDKRLSFGVKGDAQPDFLILTAGQEIWM 161
Query: 365 PDVVLLN 385
PD N
Sbjct: 162 PDSFFQN 168
>Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical
protein R11G10.1a protein.
Length = 657
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 194 IVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLV--SSERLWR 364
+VV++ + LR + I +Q + +W+DKRLS+ +L+ + + +W
Sbjct: 281 VVVSVNMLLRSISKIDNVNMEYSVQLTFRESWVDKRLSFGVKGDAQPDFLILTAGQEIWM 340
Query: 365 PDVVLLN 385
PD N
Sbjct: 341 PDSFFQN 347
>AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A
protein protein.
Length = 657
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 194 IVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLV--SSERLWR 364
+VV++ + LR + I +Q + +W+DKRLS+ +L+ + + +W
Sbjct: 281 VVVSVNMLLRSISKIDNVNMEYSVQLTFRESWVDKRLSFGVKGDAQPDFLILTAGQEIWM 340
Query: 365 PDVVLLN 385
PD N
Sbjct: 341 PDSFFQN 347
>AJ000537-1|CAA04170.1| 478|Caenorhabditis elegans GluClalpha2B
protein protein.
Length = 478
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 194 IVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLV--SSERLWR 364
+VV++ + LR + I +Q + +W+DKRLS+ +L+ + + +W
Sbjct: 102 VVVSVNMLLRSISKIDNVNMEYSVQLTFRESWVDKRLSFGVKGDAQPDFLILTAGQEIWM 161
Query: 365 PDVVLLN 385
PD N
Sbjct: 162 PDSFFQN 168
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 164 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWL 340
+D D+P + L L+ + E + V + ++ W D RL+WN ++ ++
Sbjct: 65 HDPDAPGRWNYTL-LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWNKEDYDDIASIY 123
Query: 341 VSSERLWRP 367
+W P
Sbjct: 124 TRQANVWSP 132
>Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical
protein C15A7.1 protein.
Length = 403
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Frame = +2
Query: 146 DSLLATYDRDSPPDSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGEW 322
+ +L D P + + + L L H + + E + + ++ W D+RL W+ +
Sbjct: 39 EDVLGPLDGSMPSELPVFIGAQLKLDHISRVDEKTGFLTLALTVKFMWSDERLQWDPSHY 98
Query: 323 GCST---------WLVSSERLWRPDVVLLN 385
T WL ++W+P + + N
Sbjct: 99 SGFTRTRLEFVDFWLY---QIWKPRIYMTN 125
>U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defective
protein 9, isoformc protein.
Length = 537
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -2
Query: 437 LDTRAAESVVPRRWLQPRLAVPRQASTSVPRTPAKCCSPTPL 312
L TR S+ P + Q R + R +S+SV R+P++ S +PL
Sbjct: 496 LKTRMEMSLSPIKPFQQRFSRERSSSSSVERSPSRERSRSPL 537
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/70 (30%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Frame = +3
Query: 624 GTVGMXTGFLSPVXGQXPGPLGXGGXPXV-GIGPXXXFSGXTXPXXXGPXGAAXRXSXXG 800
G G T + P GP G G P G P P GP GA G
Sbjct: 212 GPAGEST-YPEPAGPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGPDGNPG 270
Query: 801 AXGPGXPXGG 830
GP GG
Sbjct: 271 TAGPPGKAGG 280
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/70 (30%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Frame = +3
Query: 624 GTVGMXTGFLSPVXGQXPGPLGXGGXPXV-GIGPXXXFSGXTXPXXXGPXGAAXRXSXXG 800
G G T + P GP G G P G P P GP GA G
Sbjct: 211 GPAGEST-YPEPAAPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGPDGNPG 269
Query: 801 AXGPGXPXGG 830
GP GG
Sbjct: 270 TAGPPGKAGG 279
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -3
Query: 880 GNAXPPXXRXSXXXPXXPPXGXPGPXAPXXEXRXAAPXGPXXXG 749
G A PP + + P PP G PGP P P GP G
Sbjct: 144 GPAGPPGPQGNKG-PLGPP-GPPGPEGPNGTAGNKGPAGPPGPG 185
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 5/56 (8%)
Frame = +3
Query: 675 PGPLGXGGXPXV-----GIGPXXXFSGXTXPXXXGPXGAAXRXSXXGAXGPGXPXG 827
PGP G G P G G P GP G A R G GP P G
Sbjct: 149 PGPKGPSGLPGSAGPAGGNGRRGPPGPVGGPGEQGPQGDAGRPGAAGRPGPAGPRG 204
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 5/56 (8%)
Frame = +3
Query: 675 PGPLGXGGXPXV-----GIGPXXXFSGXTXPXXXGPXGAAXRXSXXGAXGPGXPXG 827
PGP G G P G G P GP G A R G GP P G
Sbjct: 143 PGPKGPSGLPGSAGPAGGNGRRGPPGPVGGPGEQGPQGDAGRPGAAGRPGPAGPRG 198
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Frame = +3
Query: 675 PGPLGXGGXPXVGIGP-XXXFSGXT-XPXXXGPXGAAXRXSXXGAXG-PGXPXGGXXG 839
PGP G G P P F G P GP G A GA G PG P G
Sbjct: 193 PGPAGQAGRPGNDGQPGAPSFGGGVGAPGAPGPAGDAGSPGQPGAPGQPGRPGKNAQG 250
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,988,366
Number of Sequences: 27780
Number of extensions: 400001
Number of successful extensions: 1627
Number of sequences better than 10.0: 126
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1537
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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