Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_H05
(886 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 71 2e-13
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 42 1e-04
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 40 6e-04
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 34 0.031
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 33 0.054
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 31 0.22
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 31 0.22
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 30 0.38
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.88
SPBC354.14c |vac8||vacuolar protein Vac8|Schizosaccharomyces pom... 28 1.5
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 28 2.0
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 28 2.0
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 27 2.7
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 27 3.6
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 8.2
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 70.9 bits (166), Expect = 2e-13
Identities = 34/69 (49%), Positives = 45/69 (65%)
Frame = +3
Query: 435 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXX 614
G++S WRGN ANV+RYFPTQALNFAFKDK+K++F G ++ + ++F
Sbjct: 86 GVISLWRGNTANVLRYFPTQALNFAFKDKFKKMF-GYKKERDGYAKWFAGNLASGGAAGA 144
Query: 615 TSLCFVYPL 641
SL FVY L
Sbjct: 145 ASLLFVYSL 153
Score = 66.5 bits (155), Expect = 5e-12
Identities = 61/190 (32%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Frame = +2
Query: 260 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 436
F DF+ GG+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F R E+G
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEG 86
Query: 437 SPFILAW*LRQRHQVLPDPGAQLRLQGQVQAGVPRRR*QEDAVLALLRW*SG--LRWCRR 610
+ + P + + + ++ ++ +W +G
Sbjct: 87 VISLWRGNTANVLRYFPTQALNFAFKDKFKKMFGYKKERD----GYAKWFAGNLASGGAA 142
Query: 611 SHLSVLRV-PLDFARTRLAADV--GKGDGQR*ILRVSETXSARFSSPTV*SVCTEGSGVS 781
S+L V LD+ARTRLA D K G+R + + + S + + G G S
Sbjct: 143 GAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGL-YRGFGPS 201
Query: 782 VQGIIIYRXL 811
V GI++YR L
Sbjct: 202 VVGIVVYRGL 211
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 41.9 bits (94), Expect = 1e-04
Identities = 20/54 (37%), Positives = 35/54 (64%)
Frame = +2
Query: 275 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQG 436
L+GG++A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +G
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREG 71
Score = 32.7 bits (71), Expect = 0.071
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 435 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 530
GL+ F+RGN N +R FP A+ FA + KQ
Sbjct: 71 GLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQ 102
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 39.5 bits (88), Expect = 6e-04
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +2
Query: 266 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI 421
K +AGG + V+K+ VAP++RVK+L Q H S + A R+ G+ A I
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHI 69
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 33.9 bits (74), Expect = 0.031
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 248 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLL 346
DP F++GGI+ VS+T AP++R+K++L
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML 155
Score = 27.1 bits (57), Expect = 3.6
Identities = 9/32 (28%), Positives = 22/32 (68%)
Frame = +2
Query: 272 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 367
+LAGG++ +V++ + P++ +K +Q +S+
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR 263
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 33.1 bits (72), Expect = 0.054
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 272 FLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 436
FL+GG++A + T P E +K Q+Q ++K + + YK + AF I + +G
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEG 82
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 31.1 bits (67), Expect = 0.22
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +2
Query: 251 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKE 430
PV + +++G IS + V P+E V++ LQ+Q K + Y G D +I +
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQ 163
Query: 431 QG 436
G
Sbjct: 164 YG 165
Score = 29.9 bits (64), Expect = 0.50
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 257 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 433
+F KDFLA G+S V++ V P + VK+ LQ Q I Y +D +I K +
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-----YNNALDCVKKISKNE 69
Query: 434 G 436
G
Sbjct: 70 G 70
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 31.1 bits (67), Expect = 0.22
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +2
Query: 275 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGSP 442
++GG+S A++ + P++ VK LLQ + S I ++ KG +D I G P
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIP 263
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 30.3 bits (65), Expect = 0.38
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 209 VKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQ 349
V +T +N SN P + F+AGG++ + A AP++ VK LQ
Sbjct: 32 VLLTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQ 77
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.1 bits (62), Expect = 0.88
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 275 LAGGISAAVSKTAVAPIERVKLLLQVQHVS 364
LAGGIS+ + + +AP + +K+ +Q+ S
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS 50
>SPBC354.14c |vac8||vacuolar protein Vac8|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 550
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 798 MMIPCTDTPEPSVQTDQTVGLENLADXVSE-TRRIHRWPSP 679
++IP TD+ VQ + L NL+ V + +R I W SP
Sbjct: 421 VLIPLTDSMSIEVQGNSAAALGNLSSNVDDYSRFIECWDSP 461
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 697 NSPGLGNXISXIFKSDGLIGLYR 765
+SPG+ I I+K++G+ GLYR
Sbjct: 242 SSPGIMQTIMSIYKNNGIKGLYR 264
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 266 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ 355
KD +AGG + S VAP++ VK Q Q
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQ 36
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 27.5 bits (58), Expect = 2.7
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 263 AKDFLAGGISAAVSKTAVAPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQ 433
A L G + V P E +K+ LQ V++ SK Y G VD F +I K++
Sbjct: 105 ALSILTGSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQE 155
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 27.1 bits (57), Expect = 3.6
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1
Query: 706 GLGNXISXIFKSDGLIGLYRRF 771
G+ + + ++KS+GL+GL+R F
Sbjct: 283 GIRHVLGGLYKSEGLLGLFRGF 304
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 414 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 307
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,210,565
Number of Sequences: 5004
Number of extensions: 58971
Number of successful extensions: 207
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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