Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_H03
(907 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 32 0.65
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical pr... 29 3.5
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 29 4.6
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 29 4.6
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 29 4.6
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 29 4.6
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 29 4.6
AF040656-2|ABC71795.1| 206|Caenorhabditis elegans Hypothetical ... 29 4.6
AF040656-1|AAB95048.2| 234|Caenorhabditis elegans Hypothetical ... 29 4.6
Z98853-1|CAB57901.1| 262|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical p... 29 6.0
Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z74038-2|CAE48502.1| 611|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z74038-1|CAA98497.2| 578|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z66519-10|CAD59139.1| 446|Caenorhabditis elegans Hypothetical p... 29 6.0
Z66519-9|CAA91380.1| 448|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 29 6.0
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 29 6.0
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 29 6.0
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 29 6.0
AC025726-31|AAK73929.1| 178|Caenorhabditis elegans Hypothetical... 29 6.0
AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. 29 6.0
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 8.0
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.9 bits (69), Expect = 0.65
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = -1
Query: 385 PPRSYDQRVVSVTNYAEPGEGSPNDAPQDPVVADVPQQGAQDGPPAEHRARRGSGTSPHR 206
PP + + ++++ P G + P P +G GPP H RRG G P R
Sbjct: 756 PPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRG--GRGGHGGPPPPHFDRRGGGGPPFR 813
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical protein
F13B9.1b protein.
Length = 1614
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/76 (31%), Positives = 31/76 (40%)
Frame = +3
Query: 120 GAGVSRRPRIPPPTDRLLPRGQVDPVHRTRWGDVPLPRRARCSAGGPSWAPCCGTSATTG 299
GAGV + P PPP P Q P G + R SA +A GTS++
Sbjct: 1511 GAGVEQEPVAPPP-----PMAQAGPAPPVGGGGLRAARGVMISAS--RYARVGGTSSSAS 1563
Query: 300 SCGASFGDPSPGSA*F 347
A P+P +A F
Sbjct: 1564 QAPAGMMAPAPPTANF 1579
>Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical
protein F35H8.3 protein.
Length = 422
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -3
Query: 599 HDIIQPSTETVTRPDADASDHEVGTQRRRSSRPVKQQGLGFVERHP 462
H++ + E + RP + A ++V Q +R ++Q L ERHP
Sbjct: 374 HELAAHTDEPIVRPISVAYSNQVQKQMQRQRENRRKQELLIAERHP 419
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical protein
F13B9.1a protein.
Length = 1632
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/76 (30%), Positives = 31/76 (40%)
Frame = +3
Query: 120 GAGVSRRPRIPPPTDRLLPRGQVDPVHRTRWGDVPLPRRARCSAGGPSWAPCCGTSATTG 299
GAGV + P PPP P Q P G + R + G +A GTS++
Sbjct: 1533 GAGVEQEPVAPPP-----PMAQAGPAPPVGGGGL------RAARGASRYARVGGTSSSAS 1581
Query: 300 SCGASFGDPSPGSA*F 347
A P+P +A F
Sbjct: 1582 QAPAGMMAPAPPTANF 1597
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 39 IPGRGGDGVILRCKERLQHPALVGDRGGAGVSRRPRIPPP 158
+PG GD + HP + GD+G GV P IP P
Sbjct: 760 LPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVPGLPGIPGP 799
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 39 IPGRGGDGVILRCKERLQHPALVGDRGGAGVSRRPRIPPP 158
+PG GD + HP + GD+G GV P IP P
Sbjct: 759 LPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVPGLPGIPGP 798
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 39 IPGRGGDGVILRCKERLQHPALVGDRGGAGVSRRPRIPPP 158
+PG GD + HP + GD+G GV P IP P
Sbjct: 759 LPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVPGLPGIPGP 798
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 39 IPGRGGDGVILRCKERLQHPALVGDRGGAGVSRRPRIPPP 158
+PG GD + HP + GD+G GV P IP P
Sbjct: 760 LPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVPGLPGIPGP 799
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 39 IPGRGGDGVILRCKERLQHPALVGDRGGAGVSRRPRIPPP 158
+PG GD + HP + GD+G GV P IP P
Sbjct: 796 LPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVPGLPGIPGP 835
>AF040656-2|ABC71795.1| 206|Caenorhabditis elegans Hypothetical
protein Y8G1A.1b protein.
Length = 206
Score = 29.1 bits (62), Expect = 4.6
Identities = 24/70 (34%), Positives = 30/70 (42%)
Frame = +3
Query: 87 LQHPALVGDRGGAGVSRRPRIPPPTDRLLPRGQVDPVHRTRWGDVPLPRRARCSAGGPSW 266
L + A+ G GG G PR P P + G DP ++T G + AGGP
Sbjct: 35 LNNDAVFGPGGGEG--GPPRAPAPGSKPGMAGTQDPNYQTLAG-LNNDAVFGGGAGGPPK 91
Query: 267 APCCGTSATT 296
AP G A T
Sbjct: 92 APAVGGKAAT 101
>AF040656-1|AAB95048.2| 234|Caenorhabditis elegans Hypothetical
protein Y8G1A.1a protein.
Length = 234
Score = 29.1 bits (62), Expect = 4.6
Identities = 24/70 (34%), Positives = 30/70 (42%)
Frame = +3
Query: 87 LQHPALVGDRGGAGVSRRPRIPPPTDRLLPRGQVDPVHRTRWGDVPLPRRARCSAGGPSW 266
L + A+ G GG G PR P P + G DP ++T G + AGGP
Sbjct: 63 LNNDAVFGPGGGEG--GPPRAPAPGSKPGMAGTQDPNYQTLAG-LNNDAVFGGGAGGPPK 119
Query: 267 APCCGTSATT 296
AP G A T
Sbjct: 120 APAVGGKAAT 129
>Z98853-1|CAB57901.1| 262|Caenorhabditis elegans Hypothetical
protein R08A2.1 protein.
Length = 262
Score = 28.7 bits (61), Expect = 6.0
Identities = 24/70 (34%), Positives = 30/70 (42%)
Frame = +3
Query: 87 LQHPALVGDRGGAGVSRRPRIPPPTDRLLPRGQVDPVHRTRWGDVPLPRRARCSAGGPSW 266
L + A+ G GG G PR P P + G DP ++T G + AGGP
Sbjct: 93 LNNDAVFGPGGGEG--GPPRAPAPGSKPGMAGTQDPNYQTLAG-LNNDAVFGGGAGGPPK 149
Query: 267 APCCGTSATT 296
AP G A T
Sbjct: 150 APTVGGKAAT 159
>Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical
protein F53F4.11 protein.
Length = 543
Score = 28.7 bits (61), Expect = 6.0
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = -1
Query: 331 GEGSPNDAPQDPVVADVPQQGAQDGPPAEHRARRGSGTSPHRVRCTGST-CP-XXXXXXX 158
G S + P VVADVP++ + P + AR + + G+T P
Sbjct: 2 GRKSTKNTPAKNVVADVPEKDEEVVVPPKTPARSPKTRAQKSLAAGGATPAPKTPAPKTP 61
Query: 157 XXXXXXXRDTPAPPRSPTRA 98
DTPA P++PTRA
Sbjct: 62 SRTTKSTVDTPA-PKTPTRA 80
>Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical
protein K10D3.2 protein.
Length = 665
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -2
Query: 549 RLRSRGGHPEAALVPARETTGPGFCRAPPSSPSRLILVTMCATPAHAR 406
R+ S P+++ PAR +T P P S SR+ + + +TP AR
Sbjct: 553 RIASDSRVPKSSSFPARLSTAPSRRSRIPLSTSRISISSTTSTPRSAR 600
>Z74038-2|CAE48502.1| 611|Caenorhabditis elegans Hypothetical
protein F58B4.1b protein.
Length = 611
Score = 28.7 bits (61), Expect = 6.0
Identities = 21/65 (32%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Frame = +3
Query: 222 PLPRRARCSAGG-PSWAPCCGTSATTGSCGASFGDPSPGSA*FVTLTTRWS*LRGGTTGS 398
P A+C GG PS C +G G PG VT TT W L
Sbjct: 358 PAASSAQCKNGGFPSPRNCAICICPSGYGGILCDQRPPGCGDSVTATTTWQTLTNTIGDG 417
Query: 399 LPVWR 413
LP R
Sbjct: 418 LPTLR 422
>Z74038-1|CAA98497.2| 578|Caenorhabditis elegans Hypothetical
protein F58B4.1a protein.
Length = 578
Score = 28.7 bits (61), Expect = 6.0
Identities = 21/65 (32%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Frame = +3
Query: 222 PLPRRARCSAGG-PSWAPCCGTSATTGSCGASFGDPSPGSA*FVTLTTRWS*LRGGTTGS 398
P A+C GG PS C +G G PG VT TT W L
Sbjct: 358 PAASSAQCKNGGFPSPRNCAICICPSGYGGILCDQRPPGCGDSVTATTTWQTLTNTIGDG 417
Query: 399 LPVWR 413
LP R
Sbjct: 418 LPTLR 422
>Z66519-10|CAD59139.1| 446|Caenorhabditis elegans Hypothetical
protein B0334.11b protein.
Length = 446
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 407 DGQTPGSPSPELRPTCRQCNKLR*ARGGVPE 315
DG+ P P+P+L T ++ +L AR PE
Sbjct: 335 DGEPPQQPAPQLLITAKEMKRLEQARNKKPE 365
>Z66519-9|CAA91380.1| 448|Caenorhabditis elegans Hypothetical
protein B0334.11a protein.
Length = 448
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 407 DGQTPGSPSPELRPTCRQCNKLR*ARGGVPE 315
DG+ P P+P+L T ++ +L AR PE
Sbjct: 337 DGEPPQQPAPQLLITAKEMKRLEQARNKKPE 367
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = -1
Query: 355 SVTNYAEPGEGSPNDAPQDPVVADVPQQGAQDGPPAEHRAR 233
S T Y +G P +A D V V QQ Q P E RAR
Sbjct: 1767 SQTTYTATVDGLPTNAVVDLRVRVVSQQNEQSNPSPEVRAR 1807
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = -1
Query: 355 SVTNYAEPGEGSPNDAPQDPVVADVPQQGAQDGPPAEHRAR 233
S T Y +G P +A D V V QQ Q P E RAR
Sbjct: 1767 SQTTYTATVDGLPTNAVVDLRVRVVSQQNEQSNPSPEVRAR 1807
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = -1
Query: 355 SVTNYAEPGEGSPNDAPQDPVVADVPQQGAQDGPPAEHRAR 233
S T Y +G P +A D V V QQ Q P E RAR
Sbjct: 1767 SQTTYTATVDGLPTNAVVDLRVRVVSQQNEQSNPSPEVRAR 1807
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = -1
Query: 355 SVTNYAEPGEGSPNDAPQDPVVADVPQQGAQDGPPAEHRAR 233
S T Y +G P +A D V V QQ Q P E RAR
Sbjct: 1767 SQTTYTATVDGLPTNAVVDLRVRVVSQQNEQSNPSPEVRAR 1807
>AC025726-31|AAK73929.1| 178|Caenorhabditis elegans Hypothetical
protein Y71G12B.3 protein.
Length = 178
Score = 28.7 bits (61), Expect = 6.0
Identities = 21/86 (24%), Positives = 30/86 (34%)
Frame = +3
Query: 81 ERLQHPALVGDRGGAGVSRRPRIPPPTDRLLPRGQVDPVHRTRWGDVPLPRRARCSAGGP 260
E + H AL+ D G A V+ + LP P + R + +
Sbjct: 54 ETVAHDALISDDGAAKVATGDGVQE-----LPESDPSPSKKPRVNKAKVKKLKNKIVSFR 108
Query: 261 SWAPCCGTSATTGSCGASFGDPSPGS 338
SW P C S G S P+ G+
Sbjct: 109 SWRPVCAASGAGGGAIESKPPPAHGA 134
>AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein.
Length = 665
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -2
Query: 549 RLRSRGGHPEAALVPARETTGPGFCRAPPSSPSRLILVTMCATPAHAR 406
R+ S P+++ PAR +T P P S SR+ + + +TP AR
Sbjct: 553 RIASDSRVPKSSSFPARLSTAPSRRSRIPLSTSRISISSTTSTPRSAR 600
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 28.3 bits (60), Expect = 8.0
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = -2
Query: 549 RLRSRGGHPEAALVPARETTGPGFCRAPPSSPSRLILVTMCATPAHARRADSR*SLPGA 373
R +SR P A PAR P ++PP +P R + + PA RR+ S P A
Sbjct: 333 RAKSRSKSPPA---PARRRRSPSASKSPPPAPKRAKSRSK-SPPARRRRSPSASKSPPA 387
Score = 28.3 bits (60), Expect = 8.0
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = -2
Query: 609 ARSPRHHSAEYRDRHPTRR-GRLRSRGGHPEAALVPARETTGPGFCRAPPSSPSRLILVT 433
AR R SA P RR +SR P+ + PAR P ++PP +P R +
Sbjct: 373 ARRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPARRRRSPSASKSPP-APKRAKSRS 431
Query: 432 MCATPAHARRADSR*SLP 379
RR+ S+ P
Sbjct: 432 KSPPAPRRRRSPSQSKSP 449
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,630,113
Number of Sequences: 27780
Number of extensions: 453033
Number of successful extensions: 1581
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1580
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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