Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_H03
         (907 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   1.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   1.7  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      23   3.8  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   5.1  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   6.7  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   6.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   6.7  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    22   8.8  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   8.8  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = -2

Query: 624 AXCK*AR--SPRHHSAEYRDRHPTR--RGRLRSRGGHPEAALVPARETTG 487
           A C  AR  SP H   E  D+HP R  RG+LR++    E   +P + + G
Sbjct: 370 APCGDARIFSP-HEENESVDKHPNRRARGQLRTKIESGEGT-IPVKSSEG 417


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 394  PVVPPRSYDQRVVSVTNYAEPGEGSPNDAPQDPVV 290
            P  PPR++DQ   S  +  E  E S  +  +D +V
Sbjct: 1860 PPPPPRNHDQNNSSFNDSKESNEISEAECDRDQLV 1894


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 657 DDDTSDAVPHEAXCK*ARSPRHH 589
           D++ S  +PH A    + SP H+
Sbjct: 24  DNNDSSGIPHSAESSASNSPDHY 46


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = -1

Query: 364 RVVSVTNYAEPGEGSPNDAPQDPVVADVPQQGAQDGPPAEHRARR 230
           R++S  ++    +G PND   + +   +      +G   EHR R+
Sbjct: 342 RIMSSFDFQSKDQGPPNDGNGNILSPSIHDNICSNGWICEHRWRQ 386


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 273 CCGTSATTGSCGASFGD 323
           CCG      +CGA F D
Sbjct: 201 CCGALKNIVACGAGFID 217


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = -1

Query: 337 EPGEGSPNDAPQDPVVADVPQQGAQDGP 254
           +P  G+P   P        PQ+G+   P
Sbjct: 15  QPSSGAPGPQPSPHQSPQAPQRGSPPNP 42


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -1

Query: 376 SYDQRVVSVTNYAEPGEGSPNDAPQDPVVADVPQQGAQDG 257
           SY    ++ T+   PG GS   +P D  V+DV    +  G
Sbjct: 224 SYTTATMATTS--TPGSGSLPASPADSGVSDVESSTSSGG 261


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 466 TLESQPFNPC 437
           +LE  PFNPC
Sbjct: 113 SLEGYPFNPC 122


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 466 TLESQPFNPC 437
           +LE  PFNPC
Sbjct: 129 SLEGYPFNPC 138


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,678
Number of Sequences: 438
Number of extensions: 6134
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)