Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_H02
         (947 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0064 + 20627265-20627538,20628062-20628274,20628772-206288...    28   9.4  

>09_06_0064 +
           20627265-20627538,20628062-20628274,20628772-20628827,
           20629417-20629533,20629701-20629820,20629910-20630004,
           20630092-20630185,20630406-20630537,20631190-20631302,
           20631423-20631657,20631950-20632028,20632029-20632161,
           20632780-20632821,20632902-20632950,20633443-20633525,
           20633686-20633802,20633893-20633956,20634334-20634486,
           20635043-20635126,20635207-20635401,20635507-20635578,
           20635599-20635610
          Length = 843

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = -1

Query: 485 AXXQAALCQGDRSXLXDTXGPESXVPRRGSQPRLAVPRQACHXRSED 345
           A  +A   +G       T  P + +PR GS+P+L +   A H   ED
Sbjct: 23  AVGEAGEGKGGGGGAAATQAPAAMLPRSGSRPQLDLSGAAIHGNLED 69


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,570,133
Number of Sequences: 37544
Number of extensions: 297854
Number of successful extensions: 599
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2729534420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)