Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_G14
         (867 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    24   1.6  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   3.6  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   3.6  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   4.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   8.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   8.4  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 801 GTWSXRRPSPGKDHAGXSPPP 863
           G +    PSPG  H G +P P
Sbjct: 108 GGYRSASPSPGMGHMGHTPTP 128


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 747 CPDNSDGSHRGVYS 706
           C D + G H GVYS
Sbjct: 113 CGDRASGKHYGVYS 126


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 747 CPDNSDGSHRGVYS 706
           C D + G H GVYS
Sbjct: 113 CGDRASGKHYGVYS 126


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 97  NLLRSSSAPVTSQN*RNVSSLFARHGNFEY 8
           NLLR+S +    +     SSL  R G  EY
Sbjct: 21  NLLRTSFSSAKLEKLYRASSLQQRRGGLEY 50


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 93  KFFLESSNWQLDV 131
           K+F E  NW LD+
Sbjct: 538 KYFYEIDNWMLDL 550


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 93  KFFLESSNWQLDV 131
           K+F E  NW LD+
Sbjct: 538 KYFYEIDNWMLDL 550


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,027
Number of Sequences: 438
Number of extensions: 3838
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)