Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_G08
(857 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.28
SPBC19C7.09c |uve1|uvde|endonuclease Uve1 |Schizosaccharomyces p... 30 0.48
SPCC1753.03c |rec7||meiotic recombination protein Rec7 |Schizosa... 29 0.84
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 28 1.5
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 27 3.4
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.4
SPBC887.01 |||acireductone dioxygenase family|Schizosaccharomyce... 27 4.5
SPAC23H4.14 |vam6|vps39|guanyl-nucleotide exchange factor Vma6|S... 27 4.5
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 27 4.5
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 26 6.0
SPAC13G6.09 |||zf-MYND type |Schizosaccharomyces pombe|chr 1|||M... 26 6.0
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 6.0
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 26 7.9
SPBC2G2.15c |||mitochondrial 2' O-ribose methyltransferase Mrm2 ... 26 7.9
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.7 bits (66), Expect = 0.28
Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 8/170 (4%)
Frame = +1
Query: 202 LNLIDIKKKAGQNVTEELSESIKLTLSEWSTENGKPLQNGSALSHEVPERSSHSTNLVDS 381
LN ++ + +EL ES K +L E +QN S+ + S ++VD+
Sbjct: 725 LNDLEKSLVLSERSKDELDESYK-SLQEQLASKKIEVQNVSSQLSICNSQLEQSNHIVDN 783
Query: 382 TAETDVYITRPHDDIKTKMSEEERK-------NLKIGVKIFINEDSTVALKESLENVFTA 540
++ +T D +K +S E K N + +I + A +S+ +
Sbjct: 784 LKSENLLLTSVKDKLKADLSNLESKLSSLQQDNFHMKAQIESSNQEYTATVDSMNSRILE 843
Query: 541 LQTEY-IDNVILSYNPDFLNTVEAGNEADLRNSYSAKTSPISLGSNVAKI 687
L + + N LS D + + N DLR +T + L SN+ ++
Sbjct: 844 LSNDLRVANSKLSECSDDVRRLTLQNSFDLREH---QTLVLQLQSNITEL 890
>SPBC19C7.09c |uve1|uvde|endonuclease Uve1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 29.9 bits (64), Expect = 0.48
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Frame = +1
Query: 133 KVNN*MAAMLQSASKVTINTGNVLNLIDIKKKAGQNVTEELSESI----KLTLSEWSTEN 300
K N A + K + +T KKKA +V++++ ES+ T S+ +
Sbjct: 85 KENETELANISGPHKKSTSTSTRKRARSSKKKATDSVSDKIDESVASYDSSTHLRRSSRS 144
Query: 301 GKPLQNGSALSHEVPERSSHSTNLVDSTAETDVYITRPHDDIKTKMSEEE 450
KP+ S+ E E+ S +T V E + +K + S +E
Sbjct: 145 KKPVNYNSSSESESEEQISKATKKVKQKEEEEYVEEVDEKSLKNESSSDE 194
>SPCC1753.03c |rec7||meiotic recombination protein Rec7
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 339
Score = 29.1 bits (62), Expect = 0.84
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 424 IKTKMSEEERKNLKIGVKIFINEDSTVALKESLENVFTAL 543
+ T+++EEE K L+ V ++ +DS + L +SLE V+ +
Sbjct: 301 LPTELTEEE-KQLRSKVLFYLKQDSFIQLCQSLERVWNKM 339
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +1
Query: 388 ETDVYITRPHDDIKTKMSEEERKNLKIGVKIFINEDSTVALKESLENVFTALQTEYIDNV 567
+ D I++ D ++ E+RK +G+K F E + L+ + +L +Y D
Sbjct: 19 QADETISKLCDRLEHATLFEDRKAAALGIKSFAREFKELVAAHGLKGIIQSLHRDYDDPE 78
Query: 568 IL 573
+L
Sbjct: 79 LL 80
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 27.1 bits (57), Expect = 3.4
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Frame = +1
Query: 166 SASKVTINTGNVLNLIDIKKKAGQNVTEELSESIKLTLSEWSTENGKPLQNGSALSHEVP 345
+A K T +TG + + D +K S++ SE S+ N KP + G S
Sbjct: 58 NAQKKTESTGKITSEADTEKYNSSKSPVNKEGSVEKKSSEKSSTNNKPWR-GDNTSKPSA 116
Query: 346 ERSSHSTNLVDSTAETDVYITR----PHDDIKTKMSEEE 450
S+ T+ ET I + P +++ K + +E
Sbjct: 117 NSSAERTSSQHQKPETSSQIGKDNAAPVENVNEKSTSQE 155
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 3.4
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = -1
Query: 692 TGILATLLPSDIGDVLAE*LFLRSASLPASTVFKKSGLYERITLSMYSVCKAVNTFSSDS 513
+GI ++ +PS V + + S S P+ST S T S S + SS S
Sbjct: 562 SGISSSSIPSTFSSVSS--ILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSIS 619
Query: 512 FNATVLSS 489
++T+LSS
Sbjct: 620 SSSTILSS 627
>SPBC887.01 |||acireductone dioxygenase family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 178
Score = 26.6 bits (56), Expect = 4.5
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +1
Query: 472 VKIFINEDSTVALKESLENVFTALQTEYIDNVILSY-NPDFL---NTVEAGNEADLRNSY 639
V+IF+ + + L + + FT +YI + L + NP ++ T E D R SY
Sbjct: 109 VRIFVEKGDLIILPPGIYHRFTTTTDDYIHAMRLFHENPKWIALSRTDSTSEELDARKSY 168
>SPAC23H4.14 |vam6|vps39|guanyl-nucleotide exchange factor
Vma6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 905
Score = 26.6 bits (56), Expect = 4.5
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +1
Query: 310 LQNGSALSHEVPERS--SHSTNLVDSTAETDVYITRPHDDIKTKMSEEERKNLKIGVKIF 483
L+NG A+S + S ST L DS + + +++ +D+ + ++KNL F
Sbjct: 424 LRNGDAVSTVANNKRLRSLSTYLTDSRRKANRFLS--YDEEHYFL---QKKNL------F 472
Query: 484 INEDSTVALKESLENVFTALQT 549
+N D T+ KE LE + + T
Sbjct: 473 LNADGTLVAKEKLEKIAVQIDT 494
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.6 bits (56), Expect = 4.5
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +1
Query: 418 DDIKT-KMSEEERKNLKIGVKIFINEDSTVALKESLENVFTALQTEYIDNVILSYNPDFL 594
DD KT +S ER L+ VKIF DS +L + + + ID+ ILS L
Sbjct: 2266 DDNKTLTLSNGERIALQPYVKIFFEADSVASLTRATISRCGLICISNIDDNILSSTDKML 2325
Query: 595 NTVEAGNEADLRNS 636
+ L +S
Sbjct: 2326 SFTSGATNYPLGSS 2339
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 208 LIDIKKKAGQNVTEELSESIKLTLSEWSTENGK 306
L + K+GQN+ E +E+I+ L E S E+ +
Sbjct: 2388 LFAVVSKSGQNMNEASAEAIEQLLDEISAESSE 2420
>SPAC13G6.09 |||zf-MYND type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 274
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 469 GVKIFINEDSTVALKESLENVFTALQTEYI-DNVILSYN 582
G +FI ++ L ESLEN F L Y N +SY+
Sbjct: 29 GAPLFIRKNDAAFLNESLENSFEFLMQLYAPKNSEISYH 67
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 26.2 bits (55), Expect = 6.0
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -1
Query: 701 YFRTGILATLLPSDIGDVLAE*LFLRSASLPASTVFKKSGLYERITLSMYSVCKAVNTF 525
+F TG+L D + L + L + V SGL E I L + + ++NTF
Sbjct: 698 FFGTGLLTK---EDFNNFLWTVIVLAMGGVALGKVVSSSGLLELIALKIGNAVSSLNTF 753
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 25.8 bits (54), Expect = 7.9
Identities = 16/67 (23%), Positives = 28/67 (41%)
Frame = +1
Query: 295 ENGKPLQNGSALSHEVPERSSHSTNLVDSTAETDVYITRPHDDIKTKMSEEERKNLKIGV 474
E+ KP N S V ++ HS N + +V T+PH ++ + K+ G
Sbjct: 1069 ESTKPAVNNSTKPVAVTSKNGHSRNGSHAAHSNNVIGTQPHVNVSAVPNTGNLKDALEGS 1128
Query: 475 KIFINED 495
+ +D
Sbjct: 1129 AVSKTDD 1135
>SPBC2G2.15c |||mitochondrial 2' O-ribose methyltransferase Mrm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 218
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -3
Query: 480 DLDANLQILSLLLAHFRFDIIMRP 409
D DA+LQ +LL +HFRF +M+P
Sbjct: 178 DEDADLQ--NLLKSHFRFVQVMKP 199
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,267,826
Number of Sequences: 5004
Number of extensions: 65311
Number of successful extensions: 226
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 426466470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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